Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Endocalyx_20cinctus_20[genbank_20GCA_5F001600455.1_202016-03-01] 17 sequences; 44,773,950 total letters Query= NC_009899.1 Length=344691 Score E Sequences producing significant alignments: (Bits) Value seq11 105 1e-17 >seq11 Length=1431289 Score = 105 bits (116), Expect = 1e-17 Identities = 165/236 (70%), Gaps = 0/236 (0%) Strand=Plus/Minus Query 243502 ATCATCACAGAAGCAGTTGAAAACGAAAAGGAATTCATTTGCGACGCTATTCCATGCCGG 243561 ||||||| || || || | | ||| |||| ||| | ||| || | || ||| Sbjct 758510 ATCATCATGGACGCCGTCAAGATCGAGCAGGAGTTCCTGACCGAGGCCCTGCCTTGCGCC 758451 Query 243562 CTTATTGGCATGAACTCTGAACTCATGGGACAGTACATCGAATTCGTAGCCGACCGCATT 243621 || | ||||||||||| | |||||| ||||||||||| ||||| ||||||||| | Sbjct 758450 CTCCTCGGCATGAACTCGAACCTCATGAAGCAGTACATCGAGTTCGTCGCCGACCGCCTC 758391 Query 243622 TTCATCGCGCTTGGTTATGAGAAAGTGTACAACTCCAAGAACCCCTTTGCCTTTATGGAG 243681 || |||| || || | ||||| || ||| ||| ||||| || | |||||||||| Sbjct 758390 CTCGTCGCCCTCGGCAACGAGAAGGTCTACCGGTCCGCCAACCCGTTCGACTTTATGGAG 758331 Query 243682 CTCATTTCGCTTCAAGGGAAAACTAACTTCTTCGAAAAGCGTGTCAGTGATTATCA 243737 ||| || || || || || ||||||||||| ||||| ||| | || || || Sbjct 758330 AACATCTCTCTCGGCGGCAAGACCAACTTCTTCGAGAAGCGCGTCGGCGAGTACCA 758275 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1102879759778950