Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Endocalyx_20cinctus_20[genbank_20GCA_5F001600455.1_202016-03-01] 17 sequences; 44,773,950 total letters Query= NC_010191.2 Length=186713 Score E Sequences producing significant alignments: (Bits) Value seq11 242 4e-59 seq1 84.2 3e-11 >seq11 Length=1431289 Score = 242 bits (268), Expect = 4e-59 Identities = 1096/1717 (64%), Gaps = 39/1717 (2%) Strand=Plus/Minus Query 113565 TGAACTGAATGGGTCTCGCCTTGGC--CTTTGAT-CGGAGGTAGTACATCCCCGTCTTGA 113621 ||||||| ||||| || | | ||| ||| | | ||||| |||||||| |||||||||| Sbjct 453237 TGAACTGGATGGG-CTGGGC--GGCAGCTTGGGTACGGAGATAGTACATTCCCGTCTTGA 453181 Query 113622 GCCCCTGCTTCCAGGCATACATATGCATCGAGGACAACTTGGAGAGTGTTGGACTTTCCA 113681 | || ||||||| | | ||||| | | |||| | || || | || Sbjct 453180 GACCGAGCTTCCAACCCGTGAAGTGCATGCTCGTGATCTTGCCCATAGTGGGTTCTCTCA 453121 Query 113682 TGAAGAGGTTCATACTTTGGGATTGATCGATGAAGCGTCCACGATCCGCCGCCATATCAA 113741 || | ||| | | ||||| ||||||||||| ||||| || || ||||| | | Sbjct 453120 TGTGAATGTTAAGAGACTGGGACTGATCGATGAACGCACCACGGTCGGCAGCCATCTGGA 453061 Query 113742 TCACATCCTTCATCTT---GATTTCCCACACAGTTCTGTAGAGGTTCTTAATATCATCTG 113798 || | | || ||||||||| || || |||| | ||| |||||| | | Sbjct 453060 ---CAACGGTACGCTGAGAGATTTCCCAAACCGTCTTGTACAATGCCTTGATATCAGCAG 453004 Query 113799 GGATATCCACGATATTTTGGATGGAGCCACCCGCCTTGACCATGAGATCCTTCATATCCT 113858 | || ||| || ||||| || ||||| | | ||| | | |||||| | | Sbjct 453003 GAATGCTGGGGATGTTCTGGATCGAACCACCTTCGGCAATAATGCGGTTCTTCATGTTGT 452944 Query 113859 TTGACCAGAGACCAATCTTTTTGAGATCCTCCACGAG---ATGCTTATTGACAACAACAA 113915 ||||| ||||| || | || |||| | || | | ||| ||||| | Sbjct 452943 CAGACCACAGACCCATGTCGACAAGGTCCTTGAGTAGCCAAGGGTTA---ACAACCTGGA 452887 Query 113916 ACTCACCCGCGAGGGTGCGTCTCAGATAGATATTGGTCGTGTATGGCTCAAAGCACTCAT 113975 |||| ||||||||| || | | ||||| |||| ||||| |||||||||||||||| Sbjct 452886 ACTCTCCCGCGAGGACACGACGCGAGTAGATGTTGGAGGTGTAAGGCTCAAAGCACTCAT 452827 Query 113976 TGTTACCCAAGATTTGGGCGGTGGAGGCTGTGGGCATGGGTGCCATGAGAAGGCTGTTAC 114035 |||||||||||||||| | ||| ||||||||||||||| || | | | ||||||| Sbjct 452826 TGTTACCCAAGATTTGCGAAGTGCTGGCTGTGGGCATGGGGGCGACCAACAAACTGTTAC 452767 Query 114036 GGAGACCCTTTTCCCTAATGCGTTCCTTGAGGGCGTCCCAGTCGTAGTTGAGCTTTGT-C 114094 ||| ||| | | | | || | | ||| || |||||||| || || | || | Sbjct 452766 GGACACCGTGCTGCTTGATCTGCTGCTTTAGACTATCCCAGTCCCAGA-GATCGGTGGGC 452708 Query 114095 TCCCCCTGCCACATATCAAACTGGAGGATACCTTGGGAGGCTGGCGATCCCTCAAATGTC 114154 | | | |||||| || | || |||||||| |||||| | || || ||||| | | Sbjct 452707 TTGACATCCCACATGTCGTATTGAAGGATACCCTGGGAGACCGGGGAGCCCTCGTAGCTG 452648 Query 114155 TCGTATGGGCCCTCAACCTCCGCCAATTCGGAGCTCGCCTCGAGGGCTGCGTGATACATT 114214 |||| || || ||| || | || | |||| | ||| ||||| || || Sbjct 452647 GCGTAGGGACCGAGTTCCTTAGCGAGCTCCATGGACGCCGTCAAGGCGGCGTGGTAGATG 452588 Query 114215 GTCTCAAAAATGCGAGCATTCATTGCCTTGGCCTCGTCGGAATCAAACGCGAGTCGGCAC 114274 ||||| || || | || | | ||| ||||| || || || | | |||| Sbjct 452587 GTCTCGAAGATTTGTTTGTTAAGTAACTTAGCCTCAGGCGATTCGAATGGGTATCGGAGA 452528 Query 114275 AAAATAAATACATCCGCGAGACCTTGGACACCGAGGCCAATTGGGCGATGTCTCATATTA 114334 | || |||| || |||||||||||||| | || || || || || | ||| || Sbjct 452527 GCTAGGAAAGCATCGGCAAGACCTTGGACACCCAATCCGATGGGACGGTGGCGCATGTTG 452468 Query 114335 GACTTTCGAGCGGTCTCC---ACGGGATAAAAATTCCTATCGATAACCCTATTTAGATTT 114391 || ||||| ||| ||||| || || || || | | | || |||||| Sbjct 452467 CTGTTGCGAGC---CTCAGGTACGGGGTAGTGGTTGACCTCAATGATCTTGTTCAGATTT 452411 Query 114392 TTGGTGACAACCTTTGTGATTTCATGAAGCTTTTCGTAATCAAAACTGCGAGTCTCTTCA 114451 ||| |||| | || || | ||| | | |||| | || | | | Sbjct 452410 CGCACGACCACCTGGACAACGTCGTGCAACTTCTGGAAATCGTAGGCGCCCGCGTTGTAG 452351 Query 114452 TTGACATACTTAGGAAGGGCGATTGACGCCAGATTACACACAGAGGTCTCATCCTTATCA 114511 | |||||| ||| | ||| | || ||||| || ||||||| | |||||| | | Sbjct 452350 TCCACATACGAAGGTAAGGCAAGGGAAGCCAGGTTGCACACAGCGACCTCATCAGGAGCC 452291 Query 114512 GTGTACTCTATAATTTCCGTACACAAATTTGAACTCTTAATGGTGCCCAAGTTCTTTTGA 114571 | |||||| ||||| || || || | || ||||| ||| || |||| |||||| || Sbjct 452290 GAGTACTCAATAATCTCGGTGCAGAGGTTAGAACTGCGAATAGTTCCCAGGTTCTTCTGG 452231 Query 114572 TTTGACTTTGTGTTACACGCATCCTTGTAAAGCATGTATGGCGTCCCCGTCTCCGTTTGG 114631 || ||| ||| || |||||||||||||||| |||| | || ||||| || || Sbjct 452230 TTGCTCTTGCGGTTGCAGTGATCCTTGTAAAGCATGAATGGGTTACCAGTCTCAGTCTGA 452171 Query 114632 GACTTGAGAATAGCCTTCCAGACATCGGCGGC--TGGCACAGTGGCGTTGGCTCGCCCCT 114689 | || ||| || || | ||| | | ||| || | ||||| | | || |||| Sbjct 452170 GCCTCGAGGATGGCATACCAAAGTTTCTGGGCCTTGACCTTCTGGCG--GCCACGGCCCT 452113 Query 114690 CCTCCTCGTACTTTGTGTAGAGGGCTTCAAACTCTTCACCCACGGCCTCTGAGAGCCCTG 114749 | | |||||||| ||| || || || ||||| || || | | || | ||| || | Sbjct 452112 CGGCTTCGTACTTCTCGTACAGAGCCTCGAACTCATCGCCGTAGACGTCAGCGAGGCCAG 452053 Query 114750 GTGCCTTATCTGGGCAGAAGAGAGACCATTGACCACCCTCCTCAACACGCTTCATGAAGA 114809 | || | || || | ||| | ||||| ||| || |||||||||||||||||| | Sbjct 452052 GGCACTCGTTGGGACACATGAGCGTCCATTCACCGTTCTTCTCAACACGCTTCATGAAAA 451993 Query 114810 GGTCTGGGATCCAGAGAGCTGAGAAGAGATCCCGACAGCGAGCTTCTTCATCCCCCTGAT 114869 | || || ||||||||||| ||| ||||| ||| |||| |||| || | || || | Sbjct 451992 GATCGGGAATCCAGAGAGCAAGGAAAAGATCGCGAGCGCGAACTTCCTCCTTTCCGTGGT 451933 Query 114870 TGAGACGCAACTCCAAAAAGTCCATGATATCCGCGTGCCACGGTTCCAGGTACACCGCGA 114929 | ||| | ||||| || || | | ||||| ||||||||| || ||||| | || | Sbjct 451932 TCTTACGGAGATCCAAGAACTCGAAAACATCCGAGTGCCACGGCTCGAGGTAGATGGCAA 451873 Query 114930 TTG-ACC---CCTTACGACGACCAGCCTGGTTTACATACCTCGCTGTGGCATTAAATACG 114985 | ||| || | | ||| |||||| || || || || ||| || || || Sbjct 451872 AGGCACCAGGTCTCTTGTTG-CCACCCTGGTCAACGTATCTGGCCGTGTTGTTGAAGACA 451814 Query 114986 CGAAGCATTGGAATGATACCATCAGATTGGCCATTTGTCCCCCGAATACGAGACTTATTG 115045 |||||||| || | ||||| | ||| || || || || ||| ||| | Sbjct 451813 CGAAGCATAGGTACAATACCGTTAGAAGTACCGTTGGTACCGGCAATGTAAGATCCGGTA 451754 Query 115046 GCTCTGACATCATGGATGTGCATACCAATACCCCCTGCCCACTTTGAGATTTGCGCGCAC 115105 | || || | || | || | ||||||||| || ||| ||| ||||| || || Sbjct 451753 GATCGGATACGGTGAACGTTGAGACCAATACCACCCGCCATCTTGGAGATCATAGCACAA 451694 Query 115106 TCCGTGAGACTGCCGTAGATCCCGTCGATCGAGTCACCCTTATTTGCGATAAGGAAGCAG 115165 | |||| || | ||||| || || || |||| |||| | | | |||||| || Sbjct 451693 GTCTTGAGGGTGTCATAGATACCCTCAATGCTGTCATCCTTCATGTCTACAAGGAAACAA 451634 Query 115166 CTCGACATTTGTGGCCTTGGTGTACCAGCGTTGAAGAGGGTTGGTGTCGCGTGGATGAAC 115225 || | || | | || ||||| |||||||| ||||| || | |||||| |||| Sbjct 451633 GAGGAAAGCTGAGCCTGGGGGGTACCGGCGTTGAAAAGGGTGGGGGAGGCGTGGGTGAA- 451575 Query 115226 ATACCTTG--GGACATCTTATCGTAGGTCTCCAAGAC 115260 ||| ||| |||||| || ||| ||||| | ||| Sbjct 451574 ATA-TTTGCTGGACATGAGATTGTATGTCTCAATGAC 451539 Score = 98.7 bits (108), Expect = 1e-15 Identities = 110/147 (75%), Gaps = 0/147 (0%) Strand=Plus/Plus Query 126058 GTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGTCCTGGCATGAGACC 126117 ||||||||||||||| ||||||||||| || || |||||| || || ||||||||||| Sbjct 758577 GTGGAGACCCTCGTCGCGGGAGATGAGCTCGTTGGAGAAGGTCAAGCCGGGCATGAGACC 758636 Query 126118 CCGCTTCTTCAACCAGAAAATCGCACAAAATGAACCCGAGAAGAAGATTCCCTCCACACA 126177 |||||||| | |||||| || | || | ||| ||||||||| ||||| || Sbjct 758637 GCGCTTCTTGAGCCAGAAGATGGAGGCGAAGGCACCGCTGAAGAAGATACCCTCGACGGC 758696 Query 126178 CGCGAACGCAAAGAGACGCTCAGCAAA 126204 ||||| || | | ||||| ||| || Sbjct 758697 GGCGAAGGCGATCAAACGCTGAGCGAA 758723 >seq1 Length=7732581 Score = 84.2 bits (92), Expect = 3e-11 Identities = 158/228 (69%), Gaps = 6/228 (3%) Strand=Plus/Plus Query 10967 GCGTCAATTTCATCGATGAAAACGATACACGGTTGATTTTCACGGGCAACTTC--AAAGA 11024 || || |||||||||||||| | ||| || || ||| | || || | || ||| | Sbjct 3348044 GCATCGATTTCATCGATGAAGATGATGCAAGGCGCATTCTTGCGCGC--CGTCGAAAAAA 3348101 Query 11025 TATCTCGGACTCTCTTGGCACCGACACCCACAAACATTTCCACAAAATTGGCGGCG-GAA 11083 ||| ||||||||| || || ||||| |||||||| || || || | | || | Sbjct 3348102 GATCACGGACTCTCGAAGCTCCCACACCGACAAACATCTCGACGAATTCCGAACCGCTTA 3348161 Query 11084 CATTGGATGAAGGGGACGTTGGATTCACCCGCGATGGCTCGGGCGAGGAGGGTCTTCCCC 11143 || | || || || ||| || || || ||| ||||| ||| || || ||||| ||| Sbjct 3348162 CACT-GAAAAACGGCACGCCAGACTCGCCGGCGGTGGCTTTGGCCAGTAGCGTCTTACCC 3348220 Query 11144 GTCCCAGGTTTCCCTGCGAGAAGGGCACCACGTGGGATCCTGGCACCA 11191 || || || || ||||| | ||||| ||||||||| |||||||| Sbjct 3348221 GTTCCGGGAGGACCGGCGAGGATAGCACCTCGTGGGATCTTGGCACCA 3348268 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 597353473062360