Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Endocalyx_20cinctus_20[genbank_20GCA_5F001600455.1_202016-03-01] 17 sequences; 44,773,950 total letters Query= NC_010276.1 Length=156179 Score E Sequences producing significant alignments: (Bits) Value seq15 113 5e-20 seq6 91.5 1e-13 >seq15 Length=310649 Score = 113 bits (124), Expect = 5e-20 Identities = 152/212 (72%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 64232 AGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCT 64291 || || || |||| || || || || || |||||||| || | | || || |||| Sbjct 111211 AGGACGAGGTGAAGGGTGGACTCCTTCTGGATGTTGTAGTCAGAAAGAGTACGGCCGTCC 111152 Query 64292 TCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCT 64351 || |||||||||||||| | || || |||||||||||||||||||||||||| || || Sbjct 111151 TCGAGCTGCTTGCCGGCGAAGATCAGACGCTGCTGGTCGGGAGGAATTCCTTCCTTGTCC 111092 Query 64352 TGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTC 64411 || || || || ||| || | ||||| | | ||||| || | || | ||| Sbjct 111091 TGAATCTTGGATTTGACATTATCGATGGTATCGCTAGACTCCACCTCGAGGGTGATAGTC 111032 Query 64412 TTGCCGGTCAAAGTTTTTACGAAAATTTGCAT 64443 ||||| || | || ||||||||||| ||||| Sbjct 111031 TTGCCCGTAAGGGTCTTTACGAAAATCTGCAT 111000 >seq6 Length=3640113 Score = 91.5 bits (100), Expect = 1e-13 Identities = 140/200 (70%), Gaps = 0/200 (0%) Strand=Plus/Plus Query 64247 GTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCTTCAAGCTGCTTGCCG 64306 || || || || || |||||||| || | || ||||| |||| || || ||||| || Sbjct 612406 GTAGACTCCTTCTGGATGTTGTAGTCGGAGAGAGTGCGACCGTCCTCGAGTTGCTTACCA 612465 Query 64307 GCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCTTGTATTTTTTGCTTT 64366 || |||| | ||||||||||| |||||||| ||||| || || || || || ||| Sbjct 612466 GCGAAAATCAATCGCTGCTGGTCAGGAGGAATACCTTCCTTGTCCTGGATCTTCGACTTA 612525 Query 64367 ACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTCTTGCCGGTCAAAGTT 64426 || || | || || | || || || | ||| | |||||||||||| | || Sbjct 612526 ACGTTGTCGATAGTGTCGGAAGACTCGACCTCAAGAGTGATGGTCTTGCCGGTAAGGGTC 612585 Query 64427 TTTACGAAAATTTGCATTTT 64446 || |||||||| ||||| || Sbjct 612586 TTAACGAAAATCTGCATCTT 612605 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 499644693825480