Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Endocalyx_20cinctus_20[genbank_20GCA_5F001600455.1_202016-03-01] 17 sequences; 44,773,950 total letters Query= NC_011423.1 Length=111724 Score E Sequences producing significant alignments: (Bits) Value seq15 114 9e-21 seq6 89.7 4e-13 >seq15 Length=310649 Score = 114 bits (126), Expect = 9e-21 Identities = 147/203 (72%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 14974 TGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTGAGAATTCTCGCGTCTTCTAATTGT 15033 |||||||| || || || || |||||||| || ||| | | |||| || | || Sbjct 111202 TGAAGGGTGGACTCCTTCTGGATGTTGTAGTCAGAAAGAGTACGGCCGTCCTCGAGCTGC 111143 Query 15034 TTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGAATTCCTTCCTTGTCACAAATTTTG 15093 ||||| ||| | |||| |||||| |||||| ||||||||||||||||| ||| ||| Sbjct 111142 TTGCCGGCGAAGATCAGACGCTGCTGGTCGGGAGGAATTCCTTCCTTGTCCTGAATCTTG 111083 Query 15094 CTTTTTACAATTTCTATAGTATCGCTATTTTCTACGTCTAAGGTAATGGTTTTACCTGTC 15153 ||| ||| | || || ||||||||| || || || | ||| || || || || || Sbjct 111082 GATTTGACATTATCGATGGTATCGCTAGACTCCACCTCGAGGGTGATAGTCTTGCCCGTA 111023 Query 15154 AGAGTTTTTACAAAAATTTGCAT 15176 || || ||||| ||||| ||||| Sbjct 111022 AGGGTCTTTACGAAAATCTGCAT 111000 >seq6 Length=3640113 Score = 89.7 bits (98), Expect = 4e-13 Identities = 147/212 (69%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 14968 ACTAAATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTGAGAATTCTCGCGTCTTCT 15027 || || || |||||||| || || || |||||||| ||| |||| | | |||| || Sbjct 612394 ACCAAGTGGAGGGTAGACTCCTTCTGGATGTTGTAGTCGGAGAGAGTGCGACCGTCCTCG 612453 Query 15028 AATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGAATTCCTTCCTTGTCACAA 15087 | ||| || |||||| | ||||| ||||| ||||| ||||| ||||||||||| Sbjct 612454 AGTTGCTTACCAGCGAAAATCAATCGCTGCTGGTCAGGAGGAATACCTTCCTTGTCCTGG 612513 Query 15088 ATTTTGCTTTTTACAATTTCTATAGTATCGCTATTTTCTACGTCTAAGGTAATGGTTTTA 15147 || || || || | || ||||| ||| | || || || | || ||||| || Sbjct 612514 ATCTTCGACTTAACGTTGTCGATAGTGTCGGAAGACTCGACCTCAAGAGTGATGGTCTTG 612573 Query 15148 CCTGTCAGAGTTTTTACAAAAATTTGCATATT 15179 || || || || || || ||||| ||||| || Sbjct 612574 CCGGTAAGGGTCTTAACGAAAATCTGCATCTT 612605 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 357391925952845