Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Endocalyx_20cinctus_20[genbank_20GCA_5F001600455.1_202016-03-01] 17 sequences; 44,773,950 total letters Query= NC_013288.1 Length=191761 Score E Sequences producing significant alignments: (Bits) Value seq11 224 1e-53 >seq11 Length=1431289 Score = 224 bits (248), Expect = 1e-53 Identities = 969/1518 (64%), Gaps = 27/1518 (2%) Strand=Plus/Minus Query 115719 GATTTCCCACACAGTTCTGTAGAGGTTCTTAATATCATCTGGGATATCCACGATATTTTG 115778 ||||||||| || || |||| | ||| |||||| | || || ||| || || Sbjct 453044 GATTTCCCAAACCGTCTTGTACAATGCCTTGATATCAGCAGGAATGCTGGGGATGTTCTG 452985 Query 115779 GATAGAGCCACCTGCCTTGACCATGAGATCCTTCATATCCTTTGACCAGAGACCAATCTT 115838 ||| || |||||| | | ||| | | |||||| | | ||||| ||||| || | Sbjct 452984 GATCGAACCACCTTCGGCAATAATGCGGTTCTTCATGTTGTCAGACCACAGACCCATGTC 452925 Query 115839 CTTGAGATCCTCCACGAGGTGCTTATTGACAACAACA---AACTCACCCGCGAGGGTGCG 115895 || |||| ||| || | | |||||| ||||| ||||||||| || Sbjct 452924 GACAAGGTCCTT---GAGTAGCCAAGGGTTAACAACCTGGAACTCTCCCGCGAGGACACG 452868 Query 115896 TCTCAGATAGATGTTGGTCGTGTATGGCTCAAAGCACTCATTGTTACCCAAGATTTGGGC 115955 | | |||||||||| ||||| |||||||||||||||||||||||||||||||| | Sbjct 452867 ACGCGAGTAGATGTTGGAGGTGTAAGGCTCAAAGCACTCATTGTTACCCAAGATTTGCGA 452808 Query 115956 TGTGGAGGCTGTGGGCATGGGTGCCATGAGAAGGCTGTTGCGGAGACCCACCCCCCTAAT 116015 ||| ||||||||||||||| || | | | ||||| |||| ||| | | | || Sbjct 452807 AGTGCTGGCTGTGGGCATGGGGGCGACCAACAAACTGTTACGGACACCGTGCTGCTTGAT 452748 Query 116016 GCGTTCCTTGAGGGCGTCCCAGTCGTAGTTGAGCTTTGT-CTCCCCCTCCCACATATCAA 116074 | | ||| || |||||||| || || | || || | |||||||| || Sbjct 452747 CTGCTGCTTTAGACTATCCCAGTCCCAGA-GATCGGTGGGCTTGACATCCCACATGTCGT 452689 Query 116075 ACTGGAGGATACCTTGGGACGCTGGCGATCCCTCAAATGTCTCATATGGGCCCTCAACCT 116134 | || |||||||| ||||| | || || ||||| | | | || || || ||| Sbjct 452688 ATTGAAGGATACCCTGGGAGACCGGGGAGCCCTCGTAGCTGGCGTAGGGACCGAGTTCCT 452629 Query 116135 CCGCCAATTCGGAGCTCGCCTCGAGGGCTGCGTGATACATTGTCTCAAAAATGCGAGCAT 116194 || | || | |||| | ||| ||||| || || ||||| || || | | Sbjct 452628 TAGCGAGCTCCATGGACGCCGTCAAGGCGGCGTGGTAGATGGTCTCGAAGATTTGTTTGT 452569 Query 116195 TCATTGCCTTGGCCTCGTCGGAATCAAACGCGAGACGGCACAAAATAAATACATCCGCGA 116254 | | | ||| ||||| || || || | | ||| | || |||| || | Sbjct 452568 TAAGTAACTTAGCCTCAGGCGATTCGAATGGGTATCGGAGAGCTAGGAAAGCATCGGCAA 452509 Query 116255 GACCTTGGACACCGAGGCCAATTGGGCGATGTCTCATATTAGACTTTCGAGCGGTCTCC- 116313 ||||||||||||| | || || || || || | ||| || || ||||| ||| Sbjct 452508 GACCTTGGACACCCAATCCGATGGGACGGTGGCGCATGTTGCTGTTGCGAGC---CTCAG 452452 Query 116314 --ACGGGATAAAAATTCCTATCGATAACCCTATTTAGATTTTTGGTGACAACCTTTGTGA 116371 ||||| || || || || | | | || |||||| ||| |||| | Sbjct 452451 GTACGGGGTAGTGGTTGACCTCAATGATCTTGTTCAGATTTCGCACGACCACCTGGACAA 452392 Query 116372 TTTCATGAAGCTTTTCGTAATCAAAACTGCGAGTCTCTTCATTGACATACTTAGGAAGGG 116431 || || | ||| | | |||| | || | | | | |||||| ||| | || Sbjct 452391 CGTCGTGCAACTTCTGGAAATCGTAGGCGCCCGCGTTGTAGTCCACATACGAAGGTAAGG 452332 Query 116432 CGATTGACGCCAGATTACACACAGAGGTCTCATCCTTATCAGTGTACTCTATAATTTCCG 116491 | | || ||||| || ||||||| | |||||| | | | |||||| ||||| || | Sbjct 452331 CAAGGGAAGCCAGGTTGCACACAGCGACCTCATCAGGAGCCGAGTACTCAATAATCTCGG 452272 Query 116492 TACACAAATTTGAACTCTTAATGGTGCCCAAGTTCTTTTGATTTGACTTTGTGTTACACG 116551 | || | || ||||| ||| || |||| |||||| || || ||| ||| || Sbjct 452271 TGCAGAGGTTAGAACTGCGAATAGTTCCCAGGTTCTTCTGGTTGCTCTTGCGGTTGCAGT 452212 Query 116552 CATCCTTGTAGAGCATATATGGCGTCCCCGTCTCCGTTTGGGACTTGAGAATAGCCTTCC 116611 ||||||||| ||||| |||| | || ||||| || || | || ||| || || | || Sbjct 452211 GATCCTTGTAAAGCATGAATGGGTTACCAGTCTCAGTCTGAGCCTCGAGGATGGCATACC 452152 Query 116612 ATACATCGGCGGC--TGGCACAGTGGCGTTGGCTCGCCCCTCCTCCTCGTACTTTGTGTA 116669 | | | ||| || | ||||| | | || ||||| | |||||||| ||| Sbjct 452151 AAAGTTTCTGGGCCTTGACCTTCTGGCG--GCCACGGCCCTCGGCTTCGTACTTCTCGTA 452094 Query 116670 GAGGGCCTCAAACTCTTCACCCACAGCCTCTGAGAGCCCTGGTGCCTTATCTGGACAGAA 116729 || ||||| ||||| || || | || | ||| || || || | ||||| | Sbjct 452093 CAGAGCCTCGAACTCATCGCCGTAGACGTCAGCGAGGCCAGGGCACTCGTTGGGACACAT 452034 Query 116730 GAGAGACCATTGACCACCCTCCTCAACCCGCTTCATGAAGAGGTCTGGGATCCAGAGCGC 116789 ||| | ||||| ||| || |||||| ||||||||||| || || || |||||||| || Sbjct 452033 GAGCGTCCATTCACCGTTCTTCTCAACACGCTTCATGAAAAGATCGGGAATCCAGAGAGC 451974 Query 116790 CGAGAAGAGATCCCGACAGCGAGCTTCTTCATCCCCCTGATTGAGACGCAACTCCAAAAA 116849 ||| ||||| ||| |||| |||| || | || || || ||| | ||||| || Sbjct 451973 AAGGAAAAGATCGCGAGCGCGAACTTCCTCCTTTCCGTGGTTCTTACGGAGATCCAAGAA 451914 Query 116850 GTCCATGATATCCGCGTGCCACGGTTCCAGGTACACCGCGATTG-ACC---CCTTGCGAC 116905 || | | ||||| ||||||||| || ||||| | || | | ||| || | Sbjct 451913 CTCGAAAACATCCGAGTGCCACGGCTCGAGGTAGATGGCAAAGGCACCAGGTCTCTTGTT 451854 Query 116906 GACCAGCCTGGTTTACATACCTCGCCGTTGCGTTAAATACGCGAAGCATTGGAATGATAC 116965 | ||| |||||| || || || ||||| ||| || || |||||||| || | |||| Sbjct 451853 G-CCACCCTGGTCAACGTATCTGGCCGTGTTGTTGAAGACACGAAGCATAGGTACAATAC 451795 Query 116966 CATCAGATTGGCCATTTGTCCCCCGAATACGAGACTTGTTGGCTCTGACATCGTGGATGT 117025 | | ||| || || || || ||| ||| | | | || || | ||| | || Sbjct 451794 CGTTAGAAGTACCGTTGGTACCGGCAATGTAAGATCCGGTAGATCGGATACGGTGAACGT 451735 Query 117026 GCATACCAATACCCCCTGCCCACTTTGAGATTTGTGCGCACTCCGTGAGACTGCCGTAGA 117085 | ||||||||| || ||| ||| ||||| || || | |||| || | |||| Sbjct 451734 TGAGACCAATACCACCCGCCATCTTGGAGATCATAGCACAAGTCTTGAGGGTGTCATAGA 451675 Query 117086 TCCCATCGATCGAGTCACCCTTATTTGCGATGAGGAAGCAGCTCGACATTTGTGGCCTTG 117145 | || || || |||| |||| | | | ||||| || || | || | | | Sbjct 451674 TACCCTCAATGCTGTCATCCTTCATGTCTACAAGGAAACAAGAGGAAAGCTGAGCCTGGG 451615 Query 117146 GTGTACCAGCGTTGAAGAGGGTTGGTGTCGCGTGGATGAACATACCTTG--GGACATCTT 117203 | ||||| |||||||| ||||| || | |||||| |||| ||| ||| |||||| Sbjct 451614 GGGTACCGGCGTTGAAAAGGGTGGGGGAGGCGTGGGTGAA-ATA-TTTGCTGGACATGAG 451557 Query 117204 ATCGTAGGTCTCCAAGAC 117221 || ||| ||||| | ||| Sbjct 451556 ATTGTATGTCTCAATGAC 451539 Score = 96.9 bits (106), Expect = 4e-15 Identities = 294/448 (66%), Gaps = 16/448 (4%) Strand=Plus/Plus Query 127231 GTAGTCCCCGACCCGCTTCTCGAAGAAGTTTGTCTTCCCATCGAGGCTGATATTCTCCAT 127290 ||| || ||||| ||||||||||||||||| ||||| || |||| ||| |||||||| Sbjct 758277 GTACTCGCCGACGCGCTTCTCGAAGAAGTTGGTCTTGCCGCCGAGAGAGATGTTCTCCAT 758336 Query 127291 AAAATCAAATGGGTTCTTTGA---GTT--CCAAATTGTTGGCACCCCAATCTGTTTGAGG 127345 ||| || || ||||| || || || | |||| || | |||| Sbjct 758337 AAAGTCGAACGGGTTGGCGGACCGGTAGACCTTCTCGTTG-----CCGAGGGCGACGAGG 758391 Query 127346 AGACGATCCGAGACGTACTCAATGTACTCAGACATCTTCTCAGAGTTCATACCGATGAGG 127405 || || || | |||| |||| ||||||| ||| | |||||||| |||| |||| Sbjct 758392 AGGCGGTCGGCGACGAACTCGATGTACTGCTTCATGAGGTTCGAGTTCATGCCGAGGAGG 758451 Query 127406 TTACATGGGAGCGCGTCCAAGATGAACCCCTTCTCAATGTCCACAGCTTCCCGTACGATG 127465 || || || || || | |||| ||| ||| || | || || ||| | ||| Sbjct 758452 GCGCAAGGCAGGGCCTCGGTCAGGAACTCCTGCTCGATCTTGACGGCGTCCATGATGATC 758511 Query 127466 GCGTGAATAGTGTCCACCCCAGGTCTATTGCGTAAAGTCTTGAAGAGTTCCA--CAG-CA 127522 | ||||| | | | | || | ||| | | || | ||| || ||| | Sbjct 758512 TCCTGAATCATCTGCTTGCTGGGGCGGTTGT-TGAGGTG--GGAGAACAGCAGGCAGGCG 758568 Query 127523 AACTCTTGGTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGACCTGGC 127582 || || ||||||||||||||| ||||||||||| || || |||||| || || ||| Sbjct 758569 AAGTCGGTGTGGAGACCCTCGTCGCGGGAGATGAGCTCGTTGGAGAAGGTCAAGCCGGGC 758628 Query 127583 ATGAGACCCCGCTTCTTCAACCAGAAAATCGCACAAAATGAGCCAGAGAAGAAGATCCCC 127642 |||||||| |||||||| | |||||| || | || | || ||||||||| ||| Sbjct 758629 ATGAGACCGCGCTTCTTGAGCCAGAAGATGGAGGCGAAGGCACCGCTGAAGAAGATACCC 758688 Query 127643 TCCACACACGCGAACGCAAATAGACGCT 127670 || || ||||| || | | ||||| Sbjct 758689 TCGACGGCGGCGAAGGCGATCAAACGCT 758716 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 613507069629720