Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Endocalyx_20cinctus_20[genbank_20GCA_5F001600455.1_202016-03-01] 17 sequences; 44,773,950 total letters Query= NC_014637.1 Length=617453 Score E Sequences producing significant alignments: (Bits) Value seq6 89.7 2e-12 seq2 89.7 2e-12 seq3 86.0 2e-11 >seq6 Length=3640113 Score = 89.7 bits (98), Expect = 2e-12 Identities = 145/209 (69%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 391050 ATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATCT 391109 ||| | ||||||||||| || || || || || || || |||||||| || || || || Sbjct 612602 ATGCAGATTTTCGTTAAGACCCTTACCGGCAAGACCATCACTCTTGAGGTCGAGTCTTCC 612543 Query 391110 GATAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCAA 391169 || | || || |||| || || || || |||||||| ||||||||||| || Sbjct 612542 GACACTATCGACAACGTTAAGTCGAAGATCCAGGACAAGGAAGGTATTCCTCCTGACCAG 612483 Query 391170 CAACGTTTAATTTTCTCAGGGAAACAACTTGAAGATGGAAGAACTTTGGCGGATTATAAT 391229 || || || |||||| | || || ||||| || || || | ||| | | || || || Sbjct 612482 CAGCGATTGATTTTCGCTGGTAAGCAACTCGAGGACGGTCGCACTCTCTCCGACTACAAC 612423 Query 391230 ATTGATAAGGATGCAACACTTCACTTAGT 391258 || | ||||| | || || ||||| || Sbjct 612422 ATCCAGAAGGAGTCTACCCTCCACTTGGT 612394 >seq2 Length=5912960 Score = 89.7 bits (98), Expect = 2e-12 Identities = 212/302 (70%), Gaps = 39/302 (13%) Strand=Plus/Minus Query 291103 atttttatactattatttaattttttatataattcattactattaacatatata-GAACA 291161 |||||||| |||||| ||||||||| |||||| |||| | | ||| | | | ||| | Sbjct 5030931 ATTTTTATTATATTAT--AATTTTTTA-ATAATTAATTATTTTAAACTTTAAAACGAATA 5030875 Query 291162 ----AGTATAGTAATT-TAATGTTTCTATTATATAT--------AATGGAATTGTATC-a 291207 | |||| ||||| | | |||||||||||||| ||| | | |||| | Sbjct 5030874 TTTTATTATAATAATTCTTTTATTTCTATTATATATCTTATTAAAATAATAATTTATCGA 5030815 Query 291208 attttatcatttaaaataacataaatattagagttatttatatattttaaaaataaatta 291267 ||||||| | ||||| | | || |||||| | ||| || |||| | |||| ||||| Sbjct 5030814 ATTTTATTAATTAAATTTAAAT--ATATTATAATTAGTTTTATA-TATAAATTAAAATTT 5030758 Query 291268 aaattttgtaataacccaataaataatatattattagttgaatttactaaagttatatta 291327 |||| | |||| | ||||||||||||| ||||| || ||| || ||||||| Sbjct 5030757 AAATAAT-TAATTAATAAATAAATAATATA-TATTATTT---TTT----AAATTATATTT 5030707 Query 291328 caatttattaatttt--tta-tattttttatCAATAATGACTTTACATACATTTAAACTT 291384 || | |||||||| ||| |||| ||||| ||||| | || ||| |||||||||| Sbjct 5030706 TAACT--TTAATTTTAATTATTATTATTTAT--ATAATTA-AATAAATA-ATTTAAACTT 5030653 Query 291385 TT 291386 || Sbjct 5030652 TT 5030651 >seq3 Length=5105224 Score = 86.0 bits (94), Expect = 2e-11 Identities = 113/157 (72%), Gaps = 0/157 (0%) Strand=Plus/Plus Query 391051 TGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATCTG 391110 |||||| |||||||| || ||||| || || || || || || || || || || || | Sbjct 833416 TGAATAGCTTCGTTAAGACCCTGACGGGCAAGACCATCACCCTCGAGGTGGAGTCTTCCG 833475 Query 391111 ATAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCAAC 391170 | | |||||| | | || || ||||| || |||||||||||||| ||||| || | Sbjct 833476 ACACCATTGACAATGTCAAGTCCAAGATTCAGGACAAGGAAGGAATTCCCCCTGACCAGC 833535 Query 391171 AACGTTTAATTTTCTCAGGGAAACAACTTGAAGATGG 391207 | ||| | || ||| | || || || || || ||||| Sbjct 833536 AGCGTCTGATCTTCGCTGGAAAGCAGCTCGAGGATGG 833572 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1975717969663836