Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Endocalyx_20cinctus_20[genbank_20GCA_5F001600455.1_202016-03-01] 17 sequences; 44,773,950 total letters Query= NC_014789.1 Length=184409 Score E Sequences producing significant alignments: (Bits) Value seq11 277 2e-69 seq1 89.7 6e-13 >seq11 Length=1431289 Score = 277 bits (306), Expect = 2e-69 Identities = 1114/1732 (64%), Gaps = 33/1732 (2%) Strand=Plus/Minus Query 105590 CGGAGATAGTACATCCCGGTCTTGAGTCCTTGTTTCCA-CGCGTACATATGCATAGAAGA 105648 |||||||||||||| || |||||||| || | ||||| | ||| | ||||| | Sbjct 453205 CGGAGATAGTACATTCCCGTCTTGAGACCGAGCTTCCAACCCGTGAAG-TGCATGCTCGT 453147 Query 105649 GAGCTTGGACATCGTTGGACTTTCCATGAAAAGATTCATACTTTGACTCTGGTCAATGAA 105708 || |||| ||| || || | |||| || || | | || ||| || ||||| Sbjct 453146 GATCTTGCCCATAGTGGGTTCTCTCATGTGAATGTTAAGAGACTGGGACTGATCGATGAA 453087 Query 105709 GCGACCACGTTGTGCCGCCATATCAATGACATCCTTCATCTT---GATTTCCCACACTGT 105765 |||||| | || ||||| | |||| | | || ||||||||| || || Sbjct 453086 CGCACCACGGTCGGCAGCCATCTG---GACAACGGTACGCTGAGAGATTTCCCAAACCGT 453030 Query 105766 GCGGTAGAGATTCTTGATATCATCTGGGATATCTGAGATATTTTGAATTGAACCCCCCGC 105825 ||| | |||||||||| | || || | ||| || || || ||||| || | Sbjct 453029 CTTGTACAATGCCTTGATATCAGCAGGAATGCTGGGGATGTTCTGGATCGAACCACCTTC 452970 Query 105826 CTTGACCATGAGATCCTTCATATCCTTGGACCAAAGACCAATCTTCTTGAGATCATTGAC 105885 | ||| | | |||||| | | ||||| ||||| || | || || |||| Sbjct 452969 GGCAATAATGCGGTTCTTCATGTTGTCAGACCACAGACCCATGTCGACAAGGTCCTTGAG 452910 Query 105886 GAGATGCTTGTTGACAATCACAAACTCTCCCGCGAGGGTTCTTCTCAGATAGATGTTCGT 105945 || ||| |||| | ||||||||||||||| | | | |||||||| | Sbjct 452909 TAGCCAAGGGTTAACAACCTGGAACTCTCCCGCGAGGACACGACGCGAGTAGATGTTGGA 452850 Query 105946 CGTGTAGGGTTCAAAGCATTCATTATTACCCAAGATTTGTGCGGTGGAGGCTGTTGGCAT 106005 ||||| || |||||||| ||||| |||||||||||||| | ||| |||||| ||||| Sbjct 452849 GGTGTAAGGCTCAAAGCACTCATTGTTACCCAAGATTTGCGAAGTGCTGGCTGTGGGCAT 452790 Query 106006 TGGTGCCATCAAAAGACTGTTACGAAGACCCTTTTCCTTGATGCGTTCCTTGAGAACATC 106065 || || | ||| | ||||||||| | ||| | | |||||| | | ||| ||| ||| Sbjct 452789 GGGGGCGACCAACAAACTGTTACGGACACCGTGCTGCTTGATCTGCTGCTTTAGACTATC 452730 Query 106066 CCAGTCGTAGTTGAGC--TTGGTTTCACCTTCCCACATATCAAATTGAAGCACCCCTTGG 106123 |||||| || || | | || || || | ||||||| || ||||||| | || ||| Sbjct 452729 CCAGTCCCAGA-GATCGGTGGGCTTGACAT-CCCACATGTCGTATTGAAGGATACCCTGG 452672 Query 106124 GACGTGGGAGAACCCTCAAATGTCTCATAGGAACCTTGGGCTTCAGCCAATTCACAGCTC 106183 || || || ||||| | | | |||| ||| | | | ||| | || | | Sbjct 452671 GAGACCGGGGAGCCCTCGTAGCTGGCGTAGGGACCGAGTTCCTTAGCGAGCTCCATGGAC 452612 Query 106184 GCCTCCAGGGATGCGTGATACATGGTTTCAAAGATACGAGCATTCATCTCCTTGGCTTCA 106243 ||| || || ||||| || ||||| || ||||| | || | ||| || ||| Sbjct 452611 GCCGTCAAGGCGGCGTGGTAGATGGTCTCGAAGATTTGTTTGTTAAGTAACTTAGCCTCA 452552 Query 106244 TCTGAATCAAATGCGTAGCGGCACAAAATAAATACATCCGCGAGACCTTGAACACCCAAA 106303 || || |||| ||| ||| | || |||| || |||||||| |||||||| Sbjct 452551 GGCGATTCGAATGGGTATCGGAGAGCTAGGAAAGCATCGGCAAGACCTTGGACACCCAAT 452492 Query 106304 CCAATAGGTCTGTGTCGCATATTAGACTTTCGCGCAGTCTCA---ACGGGATAAAAATTT 106360 || || || | ||| ||||| || || | ||| || |||| ||||| || || Sbjct 452491 CCGATGGGACGGTGGCGCATGTTG--CTGTTGCG-AGCCTCAGGTACGGGGTAGTGGTTG 452435 Query 106361 CTGTCAATGACTCGGTTTAGATTTTTGGTAACAATCTTTGTGATTTCATGAAGTTTTTCA 106420 ||||||| ||| |||||| || | || | || || | || | Sbjct 452434 ACCTCAATGATCTTGTTCAGATTTCGCACGACCACCTGGACAACGTCGTGCAACTTCTGG 452375 Query 106421 TAATCAAAAGTGCGAGTCTCTTCATTGACATACTTTGGAAGGGCGATTGATGCCAAATTG 106480 |||| | | || | | | | |||||| || | ||| | || |||| ||| Sbjct 452374 AAATCGTAGGCGCCCGCGTTGTAGTCCACATACGAAGGTAAGGCAAGGGAAGCCAGGTTG 452315 Query 106481 CAAACAGCCGTCTCATCCTTATCTGTGTACTCTAAAATTTCTGTACACAAGTTGGAACTC 106540 || ||||| |||||| | | | |||||| | ||| || || || | ||| ||||| Sbjct 452314 CACACAGCGACCTCATCAGGAGCCGAGTACTCAATAATCTCGGTGCAGAGGTTAGAACTG 452255 Query 106541 TTAATCGTCCCCAAATTCTTTTGGTTACTCTTTTTGTTGCACGCATCCTTGTAGAGCATG 106600 ||| || |||| ||||| ||||| ||||| |||||| ||||||||| |||||| Sbjct 452254 CGAATAGTTCCCAGGTTCTTCTGGTTGCTCTTGCGGTTGCAGTGATCCTTGTAAAGCATG 452195 Query 106601 TAGGGCGTCCCCGTCTCCGTCTGTGACTTGAGAATTGCCTTCCACACAT-CGGCGGCTGG 106659 | || | || ||||| ||||| | || ||| || || | ||| | | | | | || | Sbjct 452194 AATGGGTTACCAGTCTCAGTCTGAGCCTCGAGGATGGCATACCAAAGTTTCTGGGCCTTG 452135 Query 106660 TACAA-TGGCGTTGGCCCGTCCCTCCGCCTCGTACTTTGTGTAGAGGGCTTCAAACTCCT 106718 | ||||| | | || ||||| || |||||||| ||| || || || ||||| | Sbjct 452134 ACCTTCTGGCG--GCCACGGCCCTCGGCTTCGTACTTCTCGTACAGAGCCTCGAACTCAT 452077 Query 106719 CACCCACCGCGTCGGAGAGACCTGGTGCCTTGTCTGGACAGAAAAGAGACCATTGACCAC 106778 | || |||| | ||| || || || || ||||| | || | ||||| ||| Sbjct 452076 CGCCGTAGACGTCAGCGAGGCCAGGGCACTCGTTGGGACACATGAGCGTCCATTCACCGT 452017 Query 106779 CCTCCTCAACCCGCTTCATGAAAAGGTCTGGAATCCACAG-GGATGAAAAGAGATCTCTA 106837 || |||||| |||||||||||||| || |||||||| || | | | ||| ||||| | | Sbjct 452016 TCTTCTCAACACGCTTCATGAAAAGATCGGGAATCCAGAGAGCAAGGAAA-AGATCGCGA 451958 Query 106838 CACCGAGCCTCTTCGTCACCTTGGTTGAGTCGTAACTCAAGGAACTCCATGATATCCGCG 106897 ||| | || || | || ||||| || | || | |||||| | | ||||| | Sbjct 451957 GCGCGAACTTCCTCCTTTCCGTGGTTCTTACGGAGATCCAAGAACTCGAAAACATCCGAG 451898 Query 106898 TGCCATGGCTCAAGATAGACTGCGATAGATCC----CTTTCGACGCCCAGCTTGATTTAC 106953 ||||| ||||| || |||| || | | || || | | | ||| | || | || Sbjct 451897 TGCCACGGCTCGAGGTAGATGGCAAAGGCACCAGGTCTCTTGTTG-CCACCCTGGTCAAC 451839 Query 106954 ATAGCGCGCTGTGGCGTTAAATACGCGAAGCATTGGAATAATACCATCTGATTGACCATT 107013 || | || ||| ||| || || |||||||| || | |||||| | || ||| || Sbjct 451838 GTATCTGGCCGTGTTGTTGAAGACACGAAGCATAGGTACAATACCGTTAGAAGTACCGTT 451779 Query 107014 TGTCCCCCGAATACGAGATTTATTGGCTCTCACATCATGGATGTGCATCCCAATACCCCC 107073 || || ||| |||| | | || | | || | || | |||||||| || Sbjct 451778 GGTACCGGCAATGTAAGATCCGGTAGATCGGATACGGTGAACGTTGAGACCAATACCACC 451719 Query 107074 AGCCCACTTTGAGATTTGCGCACACTCCGTAAGAGTTCCATAGATACCGTTGATTGAGTC 107133 ||| ||| ||||| ||||| | | || || |||||||||| | || ||| Sbjct 451718 CGCCATCTTGGAGATCATAGCACAAGTCTTGAGGGTGTCATAGATACCCTCAATGCTGTC 451659 Query 107134 CTCCTTGTTGGCGATAAGGAAGCAACTGGACATCTGCGGTCTTGGTGTACCAGCATTGAA 107193 ||||| || | | |||||| ||| ||| | ||| | || ||||| || ||||| Sbjct 451658 ATCCTTCATGTCTACAAGGAAACAAGAGGAAAGCTGAGCCTGGGGGGTACCGGCGTTGAA 451599 Query 107194 GAGGGTTGGTGTTGCGTGAATGAACATACCTTG--GGACATCTTGTCGTATGTCTCCAAG 107251 ||||| || | ||||| |||| ||| ||| |||||| | ||||||||| | | Sbjct 451598 AAGGGTGGGGGAGGCGTGGGTGAA-ATA-TTTGCTGGACATGAGATTGTATGTCTCAATG 451541 Query 107252 ACAGAATCAATGTCTTCCCCGTGGATGCCGATGGCCACACGCATAAACATGT 107303 || |||| ||| || || ||| |||| ||| |||||||| | ||||| Sbjct 451540 ACCTTTTCAACGTCGTCACCCCAGATACCGACGGCAACACGCATGATCATGT 451489 Score = 86.0 bits (94), Expect = 7e-12 Identities = 89/117 (76%), Gaps = 0/117 (0%) Strand=Plus/Plus Query 117285 GTGGAGACCCTCATCTCGGGAAATAAGTTCATTTGAGAAGCATAGGCCTGGCATGAGACC 117344 |||||||||||| || ||||| || || || || |||||| | ||| ||||||||||| Sbjct 758577 GTGGAGACCCTCGTCGCGGGAGATGAGCTCGTTGGAGAAGGTCAAGCCGGGCATGAGACC 758636 Query 117345 CCGCTTCTTCAACCAATAAATAGCGCAGAATGACCCGGAGAAGAAGATACCCTCCAC 117401 |||||||| | ||| | || | | ||| | ||| ||||||||||||||| || Sbjct 758637 GCGCTTCTTGAGCCAGAAGATGGAGGCGAAGGCACCGCTGAAGAAGATACCCTCGAC 758693 >seq1 Length=7732581 Score = 89.7 bits (98), Expect = 6e-13 Identities = 157/226 (69%), Gaps = 2/226 (1%) Strand=Plus/Plus Query 9372 GCATCAATCTCATCAATGAAGACAATACATGGTTGATTTTCGCGGGCGATTTCAAAGAGA 9431 ||||| || ||||| ||||||| || || || ||| | ||| || | ||| ||| Sbjct 3348044 GCATCGATTTCATCGATGAAGATGATGCAAGGCGCATTCTTGCGCGCCGTCGAAAAAAGA 3348103 Query 9432 TCGCGAACCCTTTTGGCGCCCACACCAACAAACATCTCCACAAAGTTTGCGGCGGA-ACA 9490 || || || || || |||||||| ||||||||||| || || | | || ||| Sbjct 3348104 TCACGGACTCTCGAAGCTCCCACACCGACAAACATCTCGACGAATTCCGAACCGCTTACA 3348163 Query 9491 TTGGATGAAGGGGACATTAGATTCACCCGCAATGGCTCGGGCGAGAAGAGTCTTACCCGT 9550 || | || || || ||| || || || ||||| ||| || || ||||||||||| Sbjct 3348164 CTGAAA-AACGGCACGCCAGACTCGCCGGCGGTGGCTTTGGCCAGTAGCGTCTTACCCGT 3348222 Query 9551 ACCTGGCTTACCCGCGAGGAGGGCACCCCGTGGAATCTTGGCGCCA 9596 || || ||| ||||||| ||||| ||||| |||||||| ||| Sbjct 3348223 TCCGGGAGGACCGGCGAGGATAGCACCTCGTGGGATCTTGGCACCA 3348268 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 589980674629080