Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Endocalyx_20cinctus_20[genbank_20GCA_5F001600455.1_202016-03-01] 17 sequences; 44,773,950 total letters Query= NC_015280.1 Length=181044 Score E Sequences producing significant alignments: (Bits) Value seq8 96.9 4e-15 >seq8 Length=2592500 Score = 96.9 bits (106), Expect = 4e-15 Identities = 167/243 (69%), Gaps = 0/243 (0%) Strand=Plus/Minus Query 153747 GATATTGCTGTAGGTAGTATGCAAAGGTTTGGTATTCCTATGGGATATGGAGGTCCTCAT 153806 |||||||| | ||||| ||| | || || |||| ||||| | || ||||| || Sbjct 246882 GATATTGCCTTCGGTAGCGCGCAGCGTTTCGGCGTTCCCATGGGCTTCGGTGGTCCCCAC 246823 Query 153807 GCTGCATTCTTTGCAACAACAGACAAGTATAAGAGAAAGATACCTGGCAGAATTGTAGGT 153866 || || ||||| || | || ||| | ||||| ||||| || || ||| |||| ||| Sbjct 246822 GCGGCGTTCTTCGCTGTTAACGATAAGCACAAGAGGAAGATTCCCGGTAGACTTGTCGGT 246763 Query 153867 CAGTCAGTAGATAGTGAAGGTAATAAAGCATACAGATTAGCACTACAGACTAGAGAGCAG 153926 ||| ||| | ||| | || | || | ||||| | ||||| ||||||||| Sbjct 246762 TTGTCCAAGGATCGGCTAGGCCAGAAGGGCTATCGTTTAGCCTTGCAGACGAGAGAGCAG 246703 Query 153927 CATATCAGGAGAGACAAAGCAACCAGTAACATCTGCACAGCTCAGGCACTGCTGGCTAAT 153986 || ||| | ||||| || || || || ||| |||| || | |||||| |||| ||||| Sbjct 246702 CACATCCGAAGAGAGAAGGCCACTAGCAACGTCTGTACTTCCCAGGCATTGCTAGCTAAC 246643 Query 153987 ATG 153989 ||| Sbjct 246642 ATG 246640 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 579212676917280