Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Endocalyx_20cinctus_20[genbank_20GCA_5F001600455.1_202016-03-01] 17 sequences; 44,773,950 total letters Query= NC_015284.1 Length=183806 Score E Sequences producing significant alignments: (Bits) Value seq8 96.9 4e-15 >seq8 Length=2592500 Score = 96.9 bits (106), Expect = 4e-15 Identities = 167/243 (69%), Gaps = 0/243 (0%) Strand=Plus/Minus Query 158422 GACATTGCTGTAGGTAGTATGCAAAGGTTTGGTATTCCTATGGGATACGGAGGTCCTCAT 158481 || ||||| | ||||| ||| | || || |||| ||||| | ||| ||||| || Sbjct 246882 GATATTGCCTTCGGTAGCGCGCAGCGTTTCGGCGTTCCCATGGGCTTCGGTGGTCCCCAC 246823 Query 158482 GCTGCATTCTTTGCAACAACAGACAAGTATAAGAGAAAGATACCTGGCAGAATTGTAGGT 158541 || || ||||| || | || ||| | ||||| ||||| || || ||| |||| ||| Sbjct 246822 GCGGCGTTCTTCGCTGTTAACGATAAGCACAAGAGGAAGATTCCCGGTAGACTTGTCGGT 246763 Query 158542 CAGTCAGTAGATAGCGAAGGTAATAAAGCATACAGATTAGCACTACAGACTAGAGAGCAG 158601 ||| ||| | ||| | || | || | ||||| | ||||| ||||||||| Sbjct 246762 TTGTCCAAGGATCGGCTAGGCCAGAAGGGCTATCGTTTAGCCTTGCAGACGAGAGAGCAG 246703 Query 158602 CATATCAGAAGAGACAAAGCAACCAGTAACATCTGCACAGCACAAGCACTGCTGGCTAAT 158661 || ||| ||||||| || || || || ||| |||| || | || ||| |||| ||||| Sbjct 246702 CACATCCGAAGAGAGAAGGCCACTAGCAACGTCTGTACTTCCCAGGCATTGCTAGCTAAC 246643 Query 158662 ATG 158664 ||| Sbjct 246642 ATG 246640 Score = 82.4 bits (90), Expect = 9e-11 Identities = 146/213 (69%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 157891 GGATACTATGGAACCATCACACCCCCAGTCATACAGCGAAACGTTCTTGAGAATCCTAGT 157950 || ||||||||||| ||| || || ||||| || ||||| || | ||||||||| | Sbjct 247443 GGTTACTATGGAACGCACACCCCTCCCGTCATCCAACGAAATGTGTTGGAGAATCCTGCT 247384 Query 157951 TGGTACACATCTTACACTCCCTATCAAGCTGAGATATCTCAGGGAAGATTGGAAGCTTTA 158010 ||||| || |||||||||||||| | || ||| ||||| | ||||| | || Sbjct 247383 TGGTATACCAGCTACACTCCCTATCAGCCAGAAATAAGCCAGGGTCGGTTGGAGTCGTTG 247324 Query 158011 TTCAATTACCAAACGCTCATCACAGAACTCACAGGACTACCGATAGCAAACGCATCTCTA 158070 |||| | ||| || | | | || ||||| | || || || || ||||| | | Sbjct 247323 GTCAACTTCCAGACTATGGTTTCTGATCTCACTGCTCTTCCCATCGCCAACGCGAGTTTG 247264 Query 158071 TTAGATGAAGCAACTGCAGCAGCAGAAGCAATG 158103 || ||||||| || || || || || || ||| Sbjct 247263 TTGGATGAAGGCACGGCCGCCGCTGAGGCTATG 247231 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 588051075039120