Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Endocalyx_20cinctus_20[genbank_20GCA_5F001600455.1_202016-03-01] 17 sequences; 44,773,950 total letters Query= NC_015398.1 Length=101487 Score E Sequences producing significant alignments: (Bits) Value seq6 122 6e-23 >seq6 Length=3640113 Score = 122 bits (134), Expect = 6e-23 Identities = 153/210 (73%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 34773 ACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCC 34832 |||||||||| ||| ||||||||||||||||||||| || | ||||| |||| ||| Sbjct 611859 ACCAAGTGAAGGGTGGATTCTTTCTGAATGTTATAGTCGGACAAAGTTCGTCCATCTTCC 611918 Query 34833 AGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTA 34892 | ||| ||||| || || || || ||||||||||| | || | ||||||||||| | Sbjct 611919 AACTGCTTTCCAGCGAAGATGAGACGTTGCTGGTCAGGTGGGATACCCTCCTTGTCTTGA 611978 Query 34893 ATCTTCTGTTTGACGGATGCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTT 34952 |||||| |||||| | || | || | || || |||| || || || || Sbjct 611979 ATCTTCGACTTGACGTTGTCGATAGTATCGGAAGATTCGACCTCGAGAGTAATCGTCTTA 612038 Query 34953 CCCGTGAGAGTCTTCACAAAGATCTGCATA 34982 ||||| | ||||| || |||||||||||| Sbjct 612039 CCCGTCAAGGTCTTGACGAAGATCTGCATA 612068 Score = 84.2 bits (92), Expect = 1e-11 Identities = 126/179 (70%), Gaps = 0/179 (0%) Strand=Plus/Plus Query 34791 TCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAAT 34850 || ||||||||||| |||||||||||| | || |||| || ||||| || || ||||| Sbjct 612105 TCCTTCTGAATGTTGTAGTCCGAAAGGGTACGGCCATCCTCGAGCTGCTTACCAGCAAAG 612164 Query 34851 ATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGAT 34910 || | ||| |||||||| | || | |||||||| || |||||| |||||| Sbjct 612165 ATCAATCGCTGCTGGTCGGGAGGGATGCCCTCCTTATCCTGGATCTTCGACTTGACGTTG 612224 Query 34911 GCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCAC 34969 | || | || | ||| || || | ||| ||||| || || || || ||||| || Sbjct 612225 TCAATGGTGTCGGAAGACTCGACCTCAAGGGTGATGGTCTTGCCGGTAAGGGTCTTGAC 612283 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 324633532739976