Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Endocalyx_20cinctus_20[genbank_20GCA_5F001600455.1_202016-03-01] 17 sequences; 44,773,950 total letters Query= NC_019491.1 Length=291144 Score E Sequences producing significant alignments: (Bits) Value seq11 307 2e-78 >seq11 Length=1431289 Score = 307 bits (340), Expect = 2e-78 Identities = 994/1519 (65%), Gaps = 53/1519 (3%) Strand=Plus/Minus Query 212906 AGGGTTGACTATCTGGAAGTCACCTGAGAGCACCCTCCTCTGGTAAAAGTTTGAAGTGTA 212965 |||||| || | |||||| || || | ||| || | | | ||| | ||| || ||||| Sbjct 452903 AGGGTTAACAACCTGGAACTCTCCCGCGAGGACACGACGCGAGTAGATGTTGGAGGTGTA 452844 Query 212966 GGGCTCGATGCTCTCGTTGTTCCCCAGAATCTGTGCAGTGCTGGCTGTGGGCATGGGAGC 213025 ||||| | || ||| ||||| |||| || || | ||||||||||||||||||||| || Sbjct 452843 AGGCTCAAAGCACTCATTGTTACCCAAGATTTGCGAAGTGCTGGCTGTGGGCATGGGGGC 452784 Query 213026 CACCAGGAGACTGTTCCTCACTCCGTGCTCGCCGATGAGGCGCCGAAG-CTCTGCCCAGT 213084 |||| | |||||| | || ||||||| ||| | || || || | |||||| Sbjct 452783 GACCAACAAACTGTTACGGACACCGTGCTGCTTGATCTGCTGCTTTAGACTAT-CCCAGT 452725 Query 213085 CCCATCTGCCAGACAGGTCCTCGTCCTTCACGTTCCACATGTCAAACTGCAAGATGCCTT 213144 |||| ||| ||| | ||| || | ||||||||| | || | ||| || | Sbjct 452724 CCCAG-----AGATCGGT----GGGCTTGACATCCCACATGTCGTATTGAAGGATACCCT 452674 Query 213145 TGCTCACGGGGCTGCCCTGGTAAGAGGAGTAGGGGCCATGCTCCTTGGCCAGCTCGCAGG 213204 | || ||| ||||| ||| || |||||| || | ||||| || ||||| || Sbjct 452673 GGGAGACCGGGGAGCCCTCGTAGCTGGCGTAGGGACCGAGTTCCTTAGCGAGCTCCATGG 452614 Query 213205 ACGCCTGCAGGGCAGCGTAGTAGATGGTTTCAAATATCTCCCTGTTGAGCTTCTTGGCCT 213264 ||||| || ||| |||| ||||||||| || || || | |||| || ||| |||| Sbjct 452613 ACGCCGTCAAGGCGGCGTGGTAGATGGTCTCGAAGATTTGTTTGTTAAGTAACTTAGCCT 452554 Query 213265 CTGGGGACGTGAA-GGGCATCATCATGCGTTGGAACACATCAGCCAGCCCCTGGACCCCG 213323 | || || ||| ||| ||| || | |||| |||| || || || ||||| || Sbjct 452553 CAGGCGATTCGAATGGGTATCGGAGAGC-TAGGAAAGCATCGGCAAGACCTTGGACACCC 452495 Query 213324 ATGCCGATGGGTCTGTGTCTCAGGTTAGACTTG-GAGCACTCCTCCAAGGGGTAAAAGTT 213382 | |||||||| | ||| | || ||| ||| |||| ||| | |||||| ||| Sbjct 452494 AATCCGATGGGACGGTGGCGCATGTTGCTGTTGCGAGC-CTCAGGTACGGGGTAGTGGTT 452436 Query 213383 GCAGTCGATGATCTTGTTGAGGTTGCGGGTGGCCACTTTGGTGACATGGGCCAGGTACTC 213442 | || ||||||||||| || || || | |||| | | || | | || ||| Sbjct 452435 GACCTCAATGATCTTGTTCAGATTTCGCACGACCACCTGGACAACGTCGTGCA---ACTT 452379 Query 213443 GTGATTGAACACGTAGCCCCC------GTCCTGCACAAACTCAGGCAGGGCGATGCTGGC 213496 || ||| ||||| | || || | |||| || ||| | ||| | | || Sbjct 452378 CTG---GAAATCGTAGGCGCCCGCGTTGTAGTCCACATACGAAGGTAAGGCAAGGGAAGC 452322 Query 213497 CAGGTTGCAAACGGCCACCTCCTGAGAGTCTGTGTACTCCATGATCTCGGTGCACAGGTT 213556 ||||||||| || || ||||| | || | | |||||| || ||||||||||| ||||| Sbjct 452321 CAGGTTGCACACAGCGACCTCATCAGGAGCCGAGTACTCAATAATCTCGGTGCAGAGGTT 452262 Query 213557 GCTGCATCGGATGGTGCCCAGGTTCTGGTGGTTTGACTTTGCGTTGGCAG-AATCCTTGT 213615 | || || || |||||||||| ||| ||| ||||| | |||| |||||||| Sbjct 452261 AGAACTGCGAATAGTTCCCAGGTTCTTCTGG-TTGCTCTTGCGGTTGCAGTGATCCTTGT 452203 Query 213616 AGAGCATGTAGGGGGACCCGGTCTCTAGCTGGGACACCAGTATCTGGC--TCCAGAGGTA 213673 | |||||| | ||| || ||||| ||| | | | || | |||| ||| || | Sbjct 452202 AAAGCATGAATGGGTTACCAGTCTCAGTCTGAGCCTCGAGGA--TGGCATACCAAAGTTT 452145 Query 213674 CCTGGCCTTGACCACCCGCCTGACAGCTCCGGGCGT-AGCCTCGTACTGTTCGTAGAGCT 213732 | |||||||| || ||| | || ||| | | || ||||||| ||||| || Sbjct 452144 CTGGGCCTTGA----CCTTCTGGCGGCCACGGCCCTCGGCTTCGTACTTCTCGTACAGAG 452089 Query 213733 CGTTGAATTCGTGGCCCCAGACCCTGTCCAGTCCCGGACAGGATGCGGGACACATGAGGC 213792 | | ||| || | ||| |||| | || || || || |||||||||||| Sbjct 452088 CCTCGAACTCATCGCCGTAGACGTCAGCGAGGCCAGGGCACTCGTTGGGACACATGAGCG 452029 Query 213793 TCCAGTCCCCG-TCATCTCTGACTCTCTGCATGAACAGGTCCGGGACCCACAGCGCGGTG 213851 |||| || ||| || |||| || | || |||||| || || || | ||| || || | Sbjct 452028 TCCATTCACCGTTCTTCTC-AACACGCTTCATGAAAAGATCGGGAATCCAGAGAGCAAGG 451970 Query 213852 AACAGGTCCCTGGTCCTCCTCTCGTCCACTCCAGAGTTTTTGCGCAGATCTAGAAAGTCA 213911 || || || | | | || ||| ||| ||| || || ||||| | || || Sbjct 451969 AAAAGATCGCGAGCGCGAACTTCCTCCTTTCCGTGGTTCTTACGGAGATCCAAGAACTCG 451910 Query 213912 AAGATGTCCGCGTGCCACGGCTCCATGTAGATGGCAAAGGCGCCCGGCCTC---TTGCCG 213968 || | |||| |||||||||||| | ||||||||||||||| || || ||| ||||| Sbjct 451909 AAAACATCCGAGTGCCACGGCTCGAGGTAGATGGCAAAGGCACCAGGTCTCTTGTTGCCA 451850 Query 213969 CCCTGGTCCACCAGCCTGGCCACCATGTTGAAGATGCGCAGGACGGGTACCAGCCCGTTG 214028 |||||||| || |||||| ||||||||| || || | ||||| | ||||| Sbjct 451849 CCCTGGTCAACGTATCTGGCCGTGTTGTTGAAGACACGAAGCATAGGTACAATACCGTTA 451790 Query 214029 GACTGTCCGTTGGTTCCCGCTATATACGAGCCGG-AG-GCCCTCAGGTTGCTCATGGAGA 214086 || |||||||| || || || || || |||| || | | | || | | |||| Sbjct 451789 GAAGTACCGTTGGTACCGGCAATGTAAGATCCGGTAGATCGGATACGGTGAACGTTGAGA 451730 Query 214087 GCCCTATGCCACCGGCGTACTTGGAGATCATGGCGCAGCGCCTCACAGTCTCCATGATGC 214146 || || ||||| || |||||||||||| || || | | | || || ||| | Sbjct 451729 --CCAATACCACCCGCCATCTTGGAGATCATAGCACAAGTCTTGAGGGTGTCATAGATAC 451672 Query 214147 CGGCCATGCTGTCATCTGTGAGGTTCAGCAAGAAGCAGCTCGAGAGCTGGGGCCTGGACG 214206 | | ||||||||||| | | || | | ||| || || ||||| | | || | Sbjct 451671 CCTCAATGCTGTCATCCTTCATGTCTACAAGGAAACAAGAGGAAAGCTGAGCCTGGGGGG 451612 Query 214207 AGCCAGAGTTGAAAAGCGTGGGGCTGGCATGGATCATAAACTTGTTAGAGAGGAGCCTGT 214266 || | ||||||||| |||||| ||| ||| | | | | ||| | || | ||| ||| Sbjct 451611 TACCGGCGTTGAAAAGGGTGGGGGAGGCGTGGGTGAAATATTTGCTGGACATGAGATTGT 451552 Query 214267 AGGTCTCCAGGACTGAGGGGATGTCGTGCTTGTGGATCTGTAGAGCGCACCTCATCAGCA 214326 | ||||| | ||| | ||||| ||| | || | ||| | || Sbjct 451551 ATGTCTCAATGACCTTTTCAACGTCGTCACCCCAGATACCGACGGCAACACGCATGATCA 451492 Query 214327 TGTGCTGGGGCCTCT---CTATGGGTCCTTTGGGGCCCTTGAGCAGGTAGGAGCGCTCCA 214383 ||||||| |||| || | || || ||| | |||||| ||||| || ||||||| Sbjct 451491 TGTGCTGCGGCCGCTCGGCAATTTTGCCATTGAG---CTTGAGAAGGTATGATCGCTCCA 451435 Query 214384 GAGTCTTGAACCCAAAGTA 214402 ||||||||| |||||||| Sbjct 451434 AAGTCTTGAAGCCAAAGTA 451416 Score = 168 bits (186), Expect = 1e-36 Identities = 344/505 (68%), Gaps = 11/505 (2%) Strand=Plus/Plus Query 47839 CTGGTAGTCCCCCACTCTATTCTCAAAGAAGTTTGTCTTCCCCTCCAACGAGATGTTCTC 47898 |||||| || || || | ||||| |||||||| ||||| || | | ||||||||||| Sbjct 758274 CTGGTACTCGCCGACGCGCTTCTCGAAGAAGTTGGTCTTGCCGCCGAGAGAGATGTTCTC 758333 Query 47899 CATGAAGAGGAAGGGGTTGGGTGTGTTATACACCCGTGTCAG-GCCCATCTGTTCCAGCA 47957 ||| ||| ||| ||||||| | || ||| | || ||| | | || | Sbjct 758334 CATAAAGTCGAACGGGTTGGCGGACCGGTAGACCT-TCTCGTTGCCGAGGGCGACGAGGA 758392 Query 47958 GGTGATCCGCGACGTACTCGATGTATTTTGACATGAGGGTGATGTTCATGCCTATGAGGG 48017 || | || |||||| |||||||||| | ||||||| | ||||||||| | ||||| Sbjct 758393 GGCGGTCGGCGACGAACTCGATGTACTGCTTCATGAGGTTCGAGTTCATGCCGAGGAGGG 758452 Query 48018 ACACGGGCAAAGCCTTTGTGAGAAACTCCTTCTCTATCTGCACGGCTTCCCCCACAATCT 48077 |||| |||| || || ||||||| ||| |||| ||||| ||| | |||| Sbjct 758453 CGCAAGGCAGGGCCTCGGTCAGGAACTCCTGCTCGATCTTGACGGCGTCCATGATGATCT 758512 Query 48078 GCTTAACGCGGGACT--CTGAGG-GTTTGTTGCGCAGGTGCTTGGCATAGAGCATGCAGG 48134 || || || ||| || | |||||| ||||| || | |||| ||||| Sbjct 758513 CCTGAATCATCTGCTTGCTGGGGCGGTTGTTG---AGGTG---GGAGAACAGCAGGCAGG 758566 Query 48135 CAAAGTCCCTGTGCAAGCCTTCGTCCCGGCTGATGAGCACGTTGGAGAAGCAGAGACCAG 48194 | ||||| |||| | || ||||| ||| ||||||| ||||||||||| | || | Sbjct 758567 CGAAGTCGGTGTGGAGACCCTCGTCGCGGGAGATGAGCTCGTTGGAGAAGGTCAAGCCGG 758626 Query 48195 GCATGACCCCCCTCTGTTTGAGCCAGAAAATTGCCGCGAAAGAGCCAGAGAAGAAGATGC 48254 |||||| || | || ||||||||||| || | ||||| | || ||||||||| | Sbjct 758627 GCATGAGACCGCGCTTCTTGAGCCAGAAGATGGAGGCGAAGGCACCGCTGAAGAAGATAC 758686 Query 48255 CCTCCACTGCCGCGAACGCGGTGAGCCTCTCTCCGAAAGAAGCGTTCTTGTCTGAGATCC 48314 |||| || || ||||| ||| | | | || |||||| | | |||||| | ||||| Sbjct 758687 CCTCGACGGCGGCGAAGGCGATCAAACGCTGAGCGAAAGTCGACTGCTTGTCGGCGATCC 758746 Query 48315 AGGAAAGCGCCCAGTCTGCCTTCTT 48339 | || |||||||| |||||||| Sbjct 758747 ATCGGAGAGCCCAGTCGGCCTTCTT 758771 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 931532602049280