Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Endocalyx_20cinctus_20[genbank_20GCA_5F001600455.1_202016-03-01] 17 sequences; 44,773,950 total letters Query= NC_020845.1 Length=180977 Score E Sequences producing significant alignments: (Bits) Value seq8 82.4 9e-11 >seq8 Length=2592500 Score = 82.4 bits (90), Expect = 9e-11 Identities = 164/243 (67%), Gaps = 0/243 (0%) Strand=Plus/Plus Query 139298 CATATTTGCGAGCAGTGCTTGTGCTGTGCAGATGTTACTGGTTGCTTTGTCTCTTCTAAT 139357 ||| || || |||| ||| || | || |||| ||| || || || || ||||||| || Sbjct 246640 CATGTTAGCTAGCAATGCCTGGGAAGTACAGACGTTGCTAGTGGCCTTCTCTCTTCGGAT 246699 Query 139358 ATGCTGCTCTCTAGTTTGTAGTGCTAATCTGTATGCAGGATTGCCTTCGCTGTCCACTGA 139417 ||||||||||| || || | ||||| | || | | |||| | ||| || Sbjct 246700 GTGCTGCTCTCTCGTCTGCAAGGCTAAACGATAGCCCTTCTGGCCTAGCCGATCCTTGGA 246759 Query 139418 CTGACCTACAATTCTGCCAGGTATCTTTCTCTTATACTTGTCTGTTGTTGCAAAGAATGC 139477 | ||| |||| ||| || || ||||| ||||| | ||| || | || ||||| || Sbjct 246760 CAAACCGACAAGTCTACCGGGAATCTTCCTCTTGTGCTTATCGTTAACAGCGAAGAACGC 246819 Query 139478 AGCATGAGGACCTCCGTATCCCATAGGAATACCAAACCTTTGCATACTACCTACAGCAAT 139537 || || ||||| ||| | ||||| |||| || || | ||| ||||| | ||||| Sbjct 246820 CGCGTGGGGACCACCGAAGCCCATGGGAACGCCGAAACGCTGCGCGCTACCGAAGGCAAT 246879 Query 139538 ATC 139540 ||| Sbjct 246880 ATC 246882 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 578998276962840