Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Endocalyx_20cinctus_20[genbank_20GCA_5F001600455.1_202016-03-01] 17 sequences; 44,773,950 total letters Query= NC_020852.1 Length=186468 Score E Sequences producing significant alignments: (Bits) Value seq11 257 2e-63 seq1 91.5 2e-13 >seq11 Length=1431289 Score = 257 bits (284), Expect = 2e-63 Identities = 1116/1740 (64%), Gaps = 35/1740 (2%) Strand=Plus/Plus Query 75212 CCACAGTACATGTTCATGCGGGTCGCAATCGGCATCCACGGGGAAGACATTGATTCTGTC 75271 || ||| ||||| ||||||| || || |||| ||| || || ||| |||| ||| Sbjct 451482 CCGCAGCACATGATCATGCGTGTTGCCGTCGGTATCTGGGGTGACGACGTTGAAAAGGTC 451541 Query 75272 TTGGAGACATACGACAAGATGTCC--CAAGGTATGTTCATTCACGCAACACCAACCCTCT 75329 | ||||||||| | |||||| ||| ||| |||| ||||| | || ||||| | Sbjct 451542 ATTGAGACATACAATCTCATGTCCAGCAAA-TAT-TTCACCCACGCCTCCCCCACCCTTT 451599 Query 75330 TCAATGCTGGTACACCAAGACCGCAGATGTCCAGTTGCTTCCTTATCGCCAACAAGGAGG 75389 |||| || ||||| || | ||| | ||| ||| |||||| | | || ||||| | Sbjct 451600 TCAACGCCGGTACCCCCCAGGCTCAGCTTTCCTCTTGTTTCCTTGTAGACATGAAGGATG 451659 Query 75390 ACTCAATCAACGGTATCTATGGAACTCTTACGGAGTGTGCGCAAATCTCAAAGTGGGCTG 75449 || || | |||||||||| || || | | ||||| ||||| ||| ||| | Sbjct 451660 ACAGCATTGAGGGTATCTATGACACCCTCAAGACTTGTGCTATGATCTCCAAGATGGCGG 451719 Query 75450 GGGGTATTGGGATGCACATCCATGATGTGAGAGCCAATAAATCTCGTATTCGGGGGACAA 75509 | |||||||| | || | || | | || | | |||| ||| || || | Sbjct 451720 GTGGTATTGGTCTCAACGTTCACCGTATCCGATCTACCGGATCTTACATTGCCGGTACCA 451779 Query 75510 ATGGTCAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGCGCTATG 75569 | ||| || | |||||| | || |||||||| || || ||| ||| || | || | Sbjct 451780 ACGGTACTTCTAACGGTATTGTACCTATGCTTCGTGTCTTCAACAACACGGCCAGATACG 451839 Query 75570 TAAATCAAGCGGGGCGTCGCAAGG---GGT-CCATCGCGGTCTACTTGGAACCATGGCAT 75625 | | || | | ||| | || ||| || | || ||||| | || || ||||| Sbjct 451840 TTGACCAGG-GTGGCAACAAGAGACCTGGTGCCTTTGCCATCTACCTCGAGCCGTGGCAC 451898 Query 75626 GCCGATATCATGGAGTTCCTTGAGTTACGACTCAACCAAGGTGACGAAGAGGCTCGGTGT 75685 | ||| | | |||||| | || | || ||||| || | || || | ||| | Sbjct 451899 TCGGATGTTTTCGAGTTCTTGGATCTCCGTAAGAACCACGGAAAGGAGGAAGTTCGCGCT 451958 Query 75686 AGAGATCTCTTTTCATCC-CTGTGGATTCCAGACCTTTTCATGAAGCGGGTTGAGGAGGG 75744 | ||||| ||| | | | || |||||||| || |||||||||||||| |||||| || Sbjct 451959 CGCGATCT-TTTCCTTGCTCTCTGGATTCCCGATCTTTTCATGAAGCGTGTTGAGAAGAA 452017 Query 75745 TGGTCAATGGTCTCTTTTCTGTCCAGACAAGGCACCAGGTCTCTCCGACGCGGTGGGTGA 75804 ||| ||||| | || | ||||| || || || || ||| | |||| || || Sbjct 452018 CGGTGAATGGACGCTCATGTGTCCCAACGAGTGCCCTGGCCTCGCTGACGTCTACGGCGA 452077 Query 75805 GGAGTTTGAAGCCCTCTACACAAAGTATGAAGAGGAGGGTAGAGCCAATGCGACTGTACC 75864 ||||| || || || ||| ||||| |||| ||||| | | | || || | Sbjct 452078 TGAGTTCGAGGCTCTGTACGAGAAGTACGAAGCCGAGGGCCGTGGCCGCCAGAAGGT-CA 452136 Query 75865 AGCCGCCGATG-TTTGGAAGGCTATTCTCAAATCACAGACGGAGACTGGAACACCATATA 75923 || | | || ||||| | || || ||| | | ||||| |||||||| | |||| | Sbjct 452137 AGGCCCAGAAACTTTGGTATGCCATCCTCGAGGCTCAGACTGAGACTGGTAACCCATTCA 452196 Query 75924 TGCTTTACAAGGATGCTTGTAACAAGAAGAGTAACCAAAAGAATTTGGGAACAATCAAGA 75983 |||||||||||||| || ||| ||||| ||||| ||||| ||||||| || | Sbjct 452197 TGCTTTACAAGGATCACTGCAACCGCAAGAGCAACCAGAAGAACCTGGGAACTATTCGCA 452256 Query 75984 GCTCAAATCTTTGCACGGAAATTTTAGAGTACACAGATAAGGATGAGACGGCTGTTTGCA 76043 | || || || ||||| || ||| | |||||| | | | |||||| ||||| |||| Sbjct 452257 GTTCTAACCTCTGCACCGAGATTATTGAGTACTCGGCTCCTGATGAGGTCGCTGTGTGCA 452316 Query 76044 ATTTGGCATCAATCGCCCTTCCAAAGTATGTCAATGAAGAGACTCGCACTTTTGATTATG 76103 | |||| || | ||| | || |||||| | | | | || | | |||| Sbjct 452317 ACCTGGCTTCCCTTGCCTTACCTTCGTATGTGGACTACAACGCGGGCGCCTACGATTTCC 452376 Query 76104 AAAAACTTCATGAAATCACAAAGATTGTTACCAAAAATCTAAACCGAGTCATTGACAGAA 76163 | || | || || | || | || |||||| ||| ||||||| | Sbjct 452377 AGAAGTTGCACGACGTTGTCCAGGTGGTCGTGCGAAATCTGAACAAGATCATTGAGGTCA 452436 Query 76164 ATTTTTATCCCGT---TGAGACTGCGCGAAAGTCTAATATGCGACACAGACCTATTGGTT 76220 | || ||||| |||| || ||| | || || ||||| ||| | || || || | Sbjct 452437 ACCACTACCCCGTACCTGAGGCT-CGCAACAGC--AACATGCGCCACCGTCCCATCGGAT 452493 Query 76221 TGGGTGTTCAAGGTCTCGCGGATGTATTTATTTTGTGCCGCTACGCATTTGATTCAGATG 76280 ||||||| |||||||| || |||| || | ||| ||| |||| || || || Sbjct 452494 TGGGTGTCCAAGGTCTTGCCGATGCTTTCCTAGCTCTCCGATACCCATTCGAATCGCCTG 452553 Query 76281 AAGCCAAGGAGATGAATGCTCGTATCTTTGAAACCATGTATCACGCATCCCTGGAGGCGA 76340 | || ||| | || | ||||| || ||||| || ||||| || || |||| Sbjct 452554 AGGCTAAGTTACTTAACAAACAAATCTTCGAGACCATCTACCACGCCGCCTTGACGGCGT 452613 Query 76341 GTTGTGAATTGGCTGAAGCCCAAGGTTCCTATGAGACATTTGAGGGTTCTCCCGCGTCCC 76400 || | ||| | | | ||| |||| | | | ||||| || || | |||| Sbjct 452614 CCATGGAGCTCGCTAAGGAACTCGGTCCCTACGCCAGCTACGAGGGCTCCCCGGTCTCCC 452673 Query 76401 AAGGGGTGCTTCAGTTTGATATGTGGGAAGGTGAAACCAAGC--TCAACTACGACTGGGA 76458 | || | ||||| | || |||||||| | | || || | | || || |||||||| Sbjct 452674 AGGGTATCCTTCAATACGACATGTGGGATG-TCAAGCCCACCGATCT-CTGGGACTGGGA 452731 Query 76459 TGTTCTCAAGGAACGCATCAAGGAGAAGGGTCTTCGTAACAGTCTTTTGATGGCACCAAT 76518 | ||| ||| | | |||||| || | ||| | ||||||||| | ||| | || || || Sbjct 452732 TAGTCTAAAGCAGCAGATCAAGCAGCACGGTGTCCGTAACAGTTTGTTGGTCGCCCCCAT 452791 Query 76519 GCCAACAGCCTCCACCGCACAAATCTTGGGTAATAATGAATGCTTTGAACCATACACAAC 76578 ||| |||||| ||| | |||||||||||||| ||||| |||||||| || ||||| | Sbjct 452792 GCCCACAGCCAGCACTTCGCAAATCTTGGGTAACAATGAGTGCTTTGAGCCTTACACCTC 452851 Query 76579 AAACATCTACCTGAGAAGAACCCTCGCAGGTGAGTTTGTCATTGTCAACAAGCACCTCGT 76638 ||||||||| | | | |||||| || ||||| |||| ||| || | Sbjct 452852 CAACATCTACTCGCGTCGTGTCCTCGCGGGAGAGTTCCAGGTTGTTAACCCTTGGCTACT 452911 Query 76639 CAATGACCTCAAGAAGATTGGTCTCTGGTCCAAGGATATGAAGGATCTCATGGTGAAAGC 76698 ||| ||||| | || ||||| ||||| | | |||||| | | ||| | | Sbjct 452912 CAAGGACCTTGTCGACATGGGTCTGTGGTCTGACAACATGAAGAACCGCATTATTGCCGA 452971 Query 76699 GGGTGGTTCCATTCAAAATATCTCAGATATCCCAGATGATATCAAGAATCTCTACCGCAC 76758 |||||||| || || || ||| | || || | |||||||||| | ||| || Sbjct 452972 AGGTGGTTCGATCCAGAACATCCCCAGCATTCCTGCTGATATCAAGGCATTGTACAAGAC 453031 Query 76759 AGTGTGGGAAATC---AAGATGAAAGATGTCATTGACATGGCCGCAGATCGTGGTCGCTT 76815 || ||||||||| || | | |||| | ||||| || || |||||| || Sbjct 453032 GGTTTGGGAAATCTCTCAGCGTACCGTTGTC---CAGATGGCTGCCGACCGTGGTGCGTT 453088 Query 76816 CATTGATCAAAGTCAAAG--TATGAATCTATTCATGGAAAGTCCAACGATGTCCAAGCTC 76873 ||| |||| |||| || | | || | |||| | || || ||| |||| || Sbjct 453089 CATCGATC--AGTCCCAGTCTCTTAACATTCACATGAGAGAACCCACTATGGGCAAGATC 453146 Query 76874 TCTTCTATGCATATGTACGCG-TGGAAACAGGGGCTCAAAACCGGAATGTACTATCTCCG 76932 | ||||| | ||| | ||||| | || ||||| || ||||||||||||||||| Sbjct 453147 ACGAGCATGCA-CTTCACGGGTTGGAAGCTCGGTCTCAAGACGGGAATGTACTATCTCCG 453205 Score = 86.0 bits (94), Expect = 7e-12 Identities = 89/117 (76%), Gaps = 0/117 (0%) Strand=Plus/Minus Query 65101 GTGGAGGGTATCTTCTTCTCCGGGTCATTCTGCGCTATTTATTGGTTGAAGAAGCGGGGT 65160 || ||||||||||||||| ||| | ||| | | || | ||| | |||||||| ||| Sbjct 758693 GTCGAGGGTATCTTCTTCAGCGGTGCCTTCGCCTCCATCTTCTGGCTCAAGAAGCGCGGT 758634 Query 65161 CTCATGCCAGGCCTATGCTTCTCAAATGAACTTATTTCCCGAGATGAGGGTCTCCAC 65217 |||||||| ||| | |||||| || || || || ||||| || |||||||||||| Sbjct 758633 CTCATGCCCGGCTTGACCTTCTCCAACGAGCTCATCTCCCGCGACGAGGGTCTCCAC 758577 >seq1 Length=7732581 Score = 91.5 bits (100), Expect = 2e-13 Identities = 159/228 (70%), Gaps = 4/228 (2%) Strand=Plus/Minus Query 175275 TGGTGCCAAGATCCCCCGAGGCGCCCTTCTCGCGGGTAAGCCAGGTACGGGAAAGACCCT 175334 ||||||||||||||| ||||| || | ||||| ||| || || ||||| ||||| || Sbjct 3348268 TGGTGCCAAGATCCCACGAGGTGCTATCCTCGCCGGTCCTCCCGGAACGGGTAAGACGCT 3348209 Query 175335 CCTCGCCCGAGCCATCGCGGGTGAATCAAATGTCCCATTCATCCAGTGCTCTGCCG--CA 175392 || ||| ||||| ||| || || || || || || | ||||| | || | | Sbjct 3348208 ACTGGCCAAAGCCACCGCCGGCGAGTCTGGCGTGCCGTT-TTTCAGTG-TAAGCGGTTCG 3348151 Query 175393 AACTTTGTGGAGATGTTTGTTGGTGTGGGTGCCAAAAGGGTTCGCGATCTCTTTGAAATC 175452 | || || ||||||||||| |||||||| || || || || ||||| ||| | Sbjct 3348150 GAATTCGTCGAGATGTTTGTCGGTGTGGGAGCTTCGAGAGTCCGTGATCTTTTTTCGACG 3348091 Query 175453 GCCCGCGAAAATCAACCATGTATTGTCTTCATTGATGAGATTGATGCG 175500 || ||| | ||| || || || ||||||| ||||| || |||||| Sbjct 3348090 GCGCGCAAGAATGCGCCTTGCATCATCTTCATCGATGAAATCGATGCG 3348043 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 596569473228960