Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Endocalyx_20cinctus_20[genbank_20GCA_5F001600455.1_202016-03-01] 17 sequences; 44,773,950 total letters Query= NC_021246.1 Length=281182 Score E Sequences producing significant alignments: (Bits) Value seq6 87.8 3e-12 >seq6 Length=3640113 Score = 87.8 bits (96), Expect = 3e-12 Identities = 161/236 (68%), Gaps = 0/236 (0%) Strand=Plus/Plus Query 193125 ATTTATATACCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATTA 193184 |||| |||||||| | | || || |||| || | || | ||||| ||| ||| Sbjct 611832 ATTTGCATACCACCACGGAGACGGAGGACCAAGTGAAGGGTGGATTCTTTCTGAATGTTA 611891 Query 193185 TAGTCGGATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTGA 193244 |||||||| || |||| ||| || || || ||||| || || || | | || || Sbjct 611892 TAGTCGGACAAAGTTCGTCCATCTTCCAACTGCTTTCCAGCGAAGATGAGACGTTGCTGG 611951 Query 193245 TCAGGAGGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGAA 193304 ||||| || || || || || ||||| || || | || | || |||||||||||| Sbjct 611952 TCAGGTGGGATACCCTCCTTGTCTTGAATCTTCGACTTGACGTTGTCGATAGTATCGGAA 612011 Query 193305 GACTCAACTTCTAGAGTTATAGTTTTACCTGTTAGCGTTTTTACAAATATTTGCAT 193360 || || || || ||||| || || ||||| || | || || || || || ||||| Sbjct 612012 GATTCGACCTCGAGAGTAATCGTCTTACCCGTCAAGGTCTTGACGAAGATCTGCAT 612067 Score = 87.8 bits (96), Expect = 3e-12 Identities = 150/218 (69%), Gaps = 0/218 (0%) Strand=Plus/Plus Query 193146 CGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATTATAGTCGGATAACGTTCTAGAA 193205 || || |||| || | |||| ||| || || || |||||||| | || | | Sbjct 612388 CGGAGGACCAAGTGGAGGGTAGACTCCTTCTGGATGTTGTAGTCGGAGAGAGTGCGACCG 612447 Query 193206 TCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTGATCAGGAGGTATTCCTTCTTTA 193265 || || | ||| || || || ||||| |||| ||| || |||||||| || ||||| || Sbjct 612448 TCCTCGAGTTGCTTACCAGCGAAAATCAATCGCTGCTGGTCAGGAGGAATACCTTCCTTG 612507 Query 193266 TCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGAAGACTCAACTTCTAGAGTTATA 193325 || || || || | || | || ||||| ||||||||||| || || ||||| || Sbjct 612508 TCCTGGATCTTCGACTTAACGTTGTCGATAGTGTCGGAAGACTCGACCTCAAGAGTGATG 612567 Query 193326 GTTTTACCTGTTAGCGTTTTTACAAATATTTGCATTTT 193363 || || || || || || || || || || ||||| || Sbjct 612568 GTCTTGCCGGTAAGGGTCTTAACGAAAATCTGCATCTT 612605 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 899654208823440