Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Endocalyx_20cinctus_20[genbank_20GCA_5F001600455.1_202016-03-01] 17 sequences; 44,773,950 total letters Query= NC_021249.1 Length=282895 Score E Sequences producing significant alignments: (Bits) Value seq6 109 1e-18 >seq6 Length=3640113 Score = 109 bits (120), Expect = 1e-18 Identities = 162/230 (70%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 171840 ATACCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATTATAATCT 171899 |||||||| | || || | || || || | || | ||||| ||| ||||| || Sbjct 611838 ATACCACCACGGAGACGGAGGACCAAGTGAAGGGTGGATTCTTTCTGAATGTTATAGTCG 611897 Query 171900 GATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGT 171959 || |||| |||| | || ||||| || || ||||| || || | | || ||||||||| Sbjct 611898 GACAAAGTTCGTCCATCTTCCAACTGCTTTCCAGCGAAGATGAGACGTTGCTGGTCAGGT 611957 Query 171960 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGACGATTCT 172019 || || || || || ||||| || || || || || |||||||| || ||||| Sbjct 611958 GGGATACCCTCCTTGTCTTGAATCTTCGACTTGACGTTGTCGATAGTATCGGAAGATTCG 612017 Query 172020 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTGCAT 172069 || || |||||||| || ||||| || || || || | ||| |||||||| Sbjct 612018 ACCTCGAGAGTAATCGTCTTACCCGTCAAGGTCTTGACGAAGATCTGCAT 612067 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 905135807658600