Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Endocalyx_20cinctus_20[genbank_20GCA_5F001600455.1_202016-03-01] 17 sequences; 44,773,950 total letters Query= NC_023442.1 Length=120420 Score E Sequences producing significant alignments: (Bits) Value seq6 114 1e-20 >seq6 Length=3640113 Score = 114 bits (126), Expect = 1e-20 Identities = 157/217 (72%), Gaps = 2/217 (1%) Strand=Plus/Plus Query 29571 ACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGA 29630 ||| || ||||| ||||| ||||||||||| ||||||||||| || | | || || Sbjct 611852 ACGGAGGACCAAGTGAAGGGTGGATTCTTTCTGAATGTTATAGTCGGACAAAGTTCGTCC 611911 Query 29631 ATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTT 29690 ||| || | || || ||||| | || | | |||||| || || || |||||||| || Sbjct 611912 ATCTTCCAACTGCTTTCCAGCGAAGATGAGACGTTGCTGGTCAGGTGGGATACCCTCCTT 611971 Query 29691 GTCTTGTAATTTTTG-TTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTA 29749 |||||| ||| || | ||||| | || | ||| || ||| ||| || || ||||| | Sbjct 611972 GTCTTG-AATCTTCGACTTGACGTTGTCGATAGTATCGGAAGATTCGACCTCGAGAGTAA 612030 Query 29750 TAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786 | || || || || ||||| || || || |||||||| Sbjct 612031 TCGTCTTACCCGTCAAGGTCTTGACGAAGATCTGCAT 612067 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 385219120187397