Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Endocalyx_20cinctus_20[genbank_20GCA_5F001600455.1_202016-03-01] 17 sequences; 44,773,950 total letters Query= NC_024625.1 Length=151109 Score E Sequences producing significant alignments: (Bits) Value seq11 255 6e-63 seq15 132 5e-26 seq6 123 2e-23 seq3 111 2e-19 >seq11 Length=1431289 Score = 255 bits (282), Expect = 6e-63 Identities = 1139/1771 (64%), Gaps = 75/1771 (4%) Strand=Plus/Minus Query 148047 TTAAACGACTGGCTCTGGTCAATGAACGCGCCACGGTCAGCGGCCATTT---CAATGAGT 148103 |||| |||||| ||| || |||||||| |||||||| || ||||| | ||| | Sbjct 453112 TTAAGAGACTGGGACTGATCGATGAACGCACCACGGTCGGCAGCCATCTGGACAACGGTA 453053 Query 148104 CGCTTTATCTTCATCTCCCAGGCCGTCTTGTACAGCCGCTTGATATGATCGGGAATGCCG 148163 |||| || ||||| |||||||||||| |||||||| | | ||||||| | Sbjct 453052 CGCTGAGAG---ATTTCCCAAACCGTCTTGTACAATGCCTTGATATCAGCAGGAATGCTG 452996 Query 148164 TCGATGCGCTGCACCGAGCCGCGGTGCGCAAAAATCTGATTGCGCATTTCGTCCGTGTAT 148223 |||| ||| | ||| || | | |||| ||| | || ||| | ||| | | Sbjct 452995 GGGATGTTCTGGATCGAACCACCTTCGGCAATAATGCGGTTCTTCATGTTGTCAGACCAC 452936 Query 148224 AGGTTGAGCTCGATCAGGTCATCGATCAGATACTGATTCACCACCTGAAACTCGCCGGCG 148283 || | |||| ||||| | || || | | || || ||||| ||||| || ||| Sbjct 452935 AGACCCATGTCGACAAGGTCCTTGAGTAGCCAAGGGTTAACAACCTGGAACTCTCCCGCG 452876 Query 148284 AGCACGCGCCGCAGATACACGTTGCTCGTAAACGGTTCAAACGACTCGTTGTTGCCCAAA 148343 || || || ||| || | |||| || | || ||||| |||| ||||| ||||| Sbjct 452875 AGGACACGACGCGAGTAGATGTTGGAGGTGTAAGGCTCAAAGCACTCATTGTTACCCAAG 452816 Query 148344 ATCTGCGCGGTCGTTGCCGTGGGCATGTACGCTACCAGCAGCGAGTTGCGCAAACCGCGA 148403 || |||| || | || ||||||||| || |||| || ||| || | |||| | Sbjct 452815 ATTTGCGAAGTGCTGGCTGTGGGCATGGGGGCGACCAACAAACTGTTACGGACACCGTGC 452756 Query 148404 TTTTTTATTTTGCGCTTCAGAGCCGCCCAGTCCCAGAG--CGGCGACGGTGTCACGTTCC 148461 | || || | |||| ||| ||||||||||||| ||| | || | || | || Sbjct 452755 TGCTTGATCTGCTGCTTTAGACTATCCCAGTCCCAGAGATCGGTG--GGCTTGACATCCC 452698 Query 148462 ACATGTCGTACTGCAGAATGCCGCGGCTAGCGGGGCTGCCCTCGTACGAGCTGTACGGTC 148521 |||||||||| || || || || || | ||| ||||||||| | ||| || | Sbjct 452697 ACATGTCGTATTGAAGGATACCCTGGGAGACCGGGGAGCCCTCGTAGCTGGCGTAGGGAC 452638 Query 148522 CGTGCGCCGCCGCCAGTTCGCAGCTCGCC-TCGAGCGCGCCGTAGTAAATCGTCTCGGCA 148580 || | || || || || | |||| || || ||| ||| ||| || |||||| Sbjct 452637 CGAGTTCCTTAGCGAGCTCCATGGACGCCGTCAAG-GCGGCGTGGTAGATGGTCTCGAAG 452579 Query 148581 ATTTGCCTGTTGAGCAGCGCCGCCGACTCGCT-TTCGTACGGCATACGCAGCCGCACAAA 148639 ||||| |||| || | | ||| | || |||| | || || || | || Sbjct 452578 ATTTGTTTGTTAAGTAACTTAGCCT-CAGGCGATTCGAATGGGTATCGGAGAGCTAGGAA 452520 Query 148640 CGCGTCGGCAAGGCCCTGTACGCCCACGCCAATGGGCCGGTGTTTAATGTTGGAGAGGCG 148699 || |||||||| || || || |||| || ||||| ||||| |||||| | ||| Sbjct 452519 AGCATCGGCAAGACCTTGGACACCCAATCCGATGGGACGGTGGCGCATGTTGCTGTTGCG 452460 Query 148700 CGCGCTCTCGAGCGGA-TAGTGGTTGCGGTCGATGATCTTGTCAAGATTGCGCACCACCA 148758 || ||| | ||| ||||||||| || |||||||||| ||||| ||||| |||| Sbjct 452459 AGC-CTCAGGTACGGGGTAGTGGTTGACCTCAATGATCTTGTTCAGATTTCGCACGACCA 452401 Query 148759 CCTTTGTAATTCTGCGCAGCAATTCAAAATCGTAC---------TTGTCATCTACGATGC 148809 ||| || | ||| | | |||||||| |||| || || || | Sbjct 452400 CCTGGACAACGTCGTGCAACTTCTGGAAATCGTAGGCGCCCGCGTTGTAGTCCAC-ATAC 452342 Query 148810 ATCGGTTCACGGCGATAGAGGCTAGATTGCACACGGCCGTCTCATCCGGGGCGCTGTACT 148869 ||| | ||| | || || || |||||||| || |||||| || || ||||| Sbjct 452341 GAAGGT--AAGGCAAGGGAAGCCAGGTTGCACACAGCGACCTCATCAGGAGCCGAGTACT 452284 Query 148870 CTACGATCTCGGCGCACAGATTG---CTGC-ATTTGATCACGCCCACGTTCTTTTGATTG 148925 | | ||||||| ||| || || |||| | | | || ||| |||||| || ||| Sbjct 452283 CAATAATCTCGGTGCAGAGGTTAGAACTGCGAATAGTTC----CCAGGTTCTTCTGGTTG 452228 Query 148926 CTCTTGCTGTTGCACGCGTCCTTGTACAGCATGTACGGTCCGCCAGTTTCCACCTGCGTT 148985 ||||||| |||||| |||||||| |||||| | || ||||| || ||| | Sbjct 452227 CTCTTGCGGTTGCAGTGATCCTTGTAAAGCATGAATGGGTTACCAGTCTCAGTCTGAGCC 452168 Query 148986 TCCACTATGA---ACCGATGCAGGTCCTGCGCGCGCACTTGCTGCTCGTAGCGACCCTCC 149042 || | ||| ||| | || | ||| || || | ||| | || ||||| Sbjct 452167 TCGAGGATGGCATACCAA---AGTTTCTGGGCCTTGACCTTCTGGCGGCCACGGCCCTCG 452111 Query 149043 TGCTCGTA--TAAAGTATACAGCCGCTCGAACGCCTCGCCGTAGCAATCGTCGAGACCGG 149100 ||||| | ||| | |||| |||||| | ||||||||| || |||| || | Sbjct 452110 GCTTCGTACTTCTCGTACAGAGCC--TCGAACTCATCGCCGTAGACGTCAGCGAGGCCAG 452053 Query 149101 GGCACTTGTGCGGGCACATGAGCGACCACACGCCGTCCGCGTACACGCGCTTCATAAACA 149160 |||||| || || |||||||||| ||| | |||| | | || |||||||| || | Sbjct 452052 GGCACTCGTTGGGACACATGAGCGTCCATTCACCGTTCTTCTCAACACGCTTCATGAAAA 451993 Query 149161 GATCGGGCACCCAGAGCGCGTACATGAGGTCGCGCGCCTTGCAGTCTTCGGCGC--CCAT 149218 ||||||| | |||||| || | || ||||| || || |||| | || | Sbjct 451992 GATCGGGAATCCAGAGAGCAAGGAAAAGATCGCGAGC---GCGAACTTCCTCCTTTCCGT 451936 Query 149219 GTTGCGG-CGCAGGTTGA-GCACGCTGAATATGTCCGCGTGCCACGGCTCAATGTACACC 149276 | | | || || | | | || | ||| | |||| |||||||||||| | ||| | Sbjct 451935 GGTTCTTACGGAGATCCAAGAACTC-GAAAACATCCGAGTGCCACGGCTCGAGGTAGATG 451877 Query 149277 GCGAGCGCGCC------CTTGCGCTTGCCGCCCTGGTCGACGTGGCGCACCATGTTGTTA 149330 || | || || |||| ||||| |||||||| |||| | || ||||||| Sbjct 451876 GCAAAGGCACCAGGTCTCTTG---TTGCCACCCTGGTCAACGTATCTGGCCGTGTTGTTG 451820 Query 149331 AACACTCGAACCATAGGTTCAATGCCACTGGCAGTGCCGTTAGTAGAGCTAATGCGACTG 149390 || || |||| ||||||| |||| || | | ||| ||||| ||| | |||| | Sbjct 451819 AAGACACGAAGCATAGGTACAATACCGTTAGAAGTACCGTTGGTACCGGCAATGTAAGAT 451760 Query 149391 CCGCGCGCTCGCACTTTGTGCACGTTGACGCCGATGCC-GCCGCCGTACTTTGAGATGGC 149449 ||| | ||| | ||| ||||||| || || || ||||| | ||| ||||| Sbjct 451759 CCGGTAGATCGGATACGGTGAACGTTGAGACCAATACCACCCGCCAT-CTTGGAGATCAT 451701 Query 149450 CGCGC-AGTCGCCGAGCGTCGAGTAGATGCCCTCGATGCTGTCGCGCTTCATGGTCAGCA 149508 || | |||| ||| || ||||| ||||| |||||||| ||||||| | | Sbjct 451700 AGCACAAGTC-TTGAGGGTGTCATAGATACCCTCAATGCTGTCATCCTTCATGTCTACAA 451642 Query 149509 GAAAGCACGAGCACATTTGCGGAAAACGCGTGCCGGCCGCGAACATGGTGGGGCTGGCGT 149568 | || || ||| | | || | | || ||||| ||| | ||||||| ||||| Sbjct 451641 GGAAACAAGAGGAAAGCTGAGCCTGGGGGGTACCGGCGTTGAAAAGGGTGGGGGAGGCGT 451582 Query 149569 GTGTAAAATATTT-CTGGCTCATCATCTCGTACGACTCGAGCACGCGGTCCATGTCATCG 149627 | || |||||||| |||| ||| | | ||| | ||| | || || | ||| || Sbjct 451581 GGGTGAAATATTTGCTGG-ACATGAGATTGTATGTCTCAATGACCTTTTCAACGTCGTCA 451523 Query 149628 CCATGGATGCCTATGGCGACGCGCATCAGCATATGCTGCGGTCGCTCCGCCACTTTGTTT 149687 || ||| || | ||| || ||||| | ||| |||||||| ||||| || | |||| Sbjct 451522 CCCCAGATACCGACGGCAACACGCATGATCATGTGCTGCGGCCGCTCGGCAATTTTG--- 451466 Query 149688 CCA---ATTTTGAGCAAGTAGCCGTTTTCTAGTGTCTTGTAGCCAAAGTACTTGTAGTCA 149744 ||| | ||||| | ||| || | |||||| |||||||||| | ||||| Sbjct 451465 CCATTGAGCTTGAGAAGGTATGATCGCTCCAAAGTCTTGAAGCCAAAGTATTGGTAGTTG 451406 Query 149745 AAGTCGCGGCCGTGGTCAATGGCGGCGTCGA 149775 ||||| ||| ||| | | || || | ||||| Sbjct 451405 AAGTCTCGGTCGTAGACGATTGCCGAGTCGA 451375 Score = 159 bits (176), Expect = 3e-34 Identities = 343/509 (67%), Gaps = 13/509 (3%) Strand=Plus/Plus Query 120351 CTTGTACTCGCCGACGCGTTTCTCAAAAAAGTTTGTTTTGCCCTCCATCGAAATGTTGTT 120410 || ||||||||||||||| ||||| || ||||| || ||||| | | || ||||| | Sbjct 758274 CTGGTACTCGCCGACGCGCTTCTCGAAGAAGTTGGTCTTGCCGCCGAGAGAGATGTTCTC 758333 Query 120411 CATAAACTCGAACGGGTTGCTCG--CGTTAAAGTATTTCGGCTGGCCCAACTGTACGAGC 120468 |||||| |||||||||||| | || || | | ||| | ||| | ||||| Sbjct 758334 CATAAAGTCGAACGGGTTGGCGGACCGGTAGACCTTCTCG--TTGCCGAGGGCGACGAGG 758391 Query 120469 AGTCGGTCCGCTACAAACTCAATGTACTCGCACATGGACTGCGCGTTCATGCCCAGCAAC 120528 || ||||| || || ||||| ||||||| |||| | || ||||||||| || | Sbjct 758392 AGGCGGTCGGCGACGAACTCGATGTACTGCTTCATGAGGTTCGAGTTCATGCCGAGGAGG 758451 Query 120529 GCCACCGGCAACGCCGACGTGAAAAACTCCTTCTCAATGTCCACCGCCTCCTTGAACATG 120588 || |||| ||| || | ||||||| ||| || | || || ||| ||| || Sbjct 758452 GCGCAAGGCAGGGCCTCGGTCAGGAACTCCTGCTCGATCTTGACGGCGTCCATGATGATC 758511 Query 120589 GCGAGCATAGTGTG---GCCGGGCATCTTGTGTTCGATGCGCGTTCGGTAGTACAGGCAC 120645 | | || | || || ||| |||| | | || | | | | |||||| Sbjct 758512 TCCTGAATCATCTGCTTGCTGGGGCGGTTGT-TGAGGTGGGAGAACAG-----CAGGCAG 758565 Query 120646 GCAAAGTCCGTGTGCAGGCCCTCGTCGCGCGATATCAGCTCGTTGCTAAACGTCAGGCCG 120705 || ||||| ||||| || ||||||||||| || || ||||||||| || |||| |||| Sbjct 758566 GCGAAGTCGGTGTGGAGACCCTCGTCGCGGGAGATGAGCTCGTTGGAGAAGGTCAAGCCG 758625 Query 120706 GGCATGATGCCTTTCGTCTTGATGTAGAATATGGCGGCAAAGCTGCCCGAAAAGAACACG 120765 ||||||| || | |||||| |||| |||| ||| ||| || ||||| | Sbjct 758626 GGCATGAGACCGCGCTTCTTGAGCCAGAAGATGGAGGCGAAGGCACCGCTGAAGAAGATA 758685 Query 120766 CCCTCCACGATGGCAAAGGCGACCATGCGCTCGGCCAACGTCGCCGTCTTGCTGTCGATC 120825 ||||| ||| ||| ||||||| || |||| || || |||| | |||| | ||||| Sbjct 758686 CCCTCGACGGCGGCGAAGGCGATCAAACGCTGAGCGAAAGTCGACTGCTTGTCGGCGATC 758745 Query 120826 CACTTCATGGCCCACTCGGCCTTTTTGCG 120854 || | ||||| |||||||| ||||| Sbjct 758746 CATCGGAGAGCCCAGTCGGCCTTCTTGCG 758774 >seq15 Length=310649 Score = 132 bits (146), Expect = 5e-26 Identities = 151/201 (75%), Gaps = 4/201 (2%) Strand=Plus/Minus Query 133463 GGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTGGACGA--GTCCTCGAGCTGCTTG 133520 ||||||||| ||||| || ||||| || | || ||| |||||||||||||||| Sbjct 111197 GGTGGACTCCTTCTGGATGTTGTAGTCAGAAAGAGT--ACGGCCGTCCTCGAGCTGCTTG 111140 Query 133521 CCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGC 133580 || ||| | || || ||||||||||||||||| || ||||||||||| ||||| Sbjct 111139 CCGGCGAAGATCAGACGCTGCTGGTCGGGAGGAATTCCTTCCTTGTCCTGAATCTTGGAT 111080 Query 133581 TTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGA 133640 |||| | || | || ||| | | |||||| |||| ||||| || ||||| || || Sbjct 111079 TTGACATTATCGATGGTATCGCTAGACTCCACCTCGAGGGTGATAGTCTTGCCCGTAAGG 111020 Query 133641 GTTTTTACGAAAATCTGCATG 133661 || |||||||||||||||||| Sbjct 111019 GTCTTTACGAAAATCTGCATG 110999 >seq6 Length=3640113 Score = 123 bits (136), Expect = 2e-23 Identities = 153/207 (74%), Gaps = 2/207 (1%) Strand=Plus/Plus Query 133455 AAATGTATGGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAG 133513 || || | ||| ||||| ||||| || ||||| ||| | ||| ||| ||||||||| Sbjct 612397 AAGTGGAGGGTAGACTCCTTCTGGATGTTGTAGTCGGAGAGAGTGCGACC-GTCCTCGAG 612455 Query 133514 CTGCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGAT 133573 ||||| || ||| |||| | ||||||||||| ||||| || ||||||||||| ||| Sbjct 612456 TTGCTTACCAGCGAAAATCAATCGCTGCTGGTCAGGAGGAATACCTTCCTTGTCCTGGAT 612515 Query 133574 CTTTTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCC 133633 ||| ||| | | || | ||||||| | ||| || || | |||| ||| ||||| Sbjct 612516 CTTCGACTTAACGTTGTCGATAGTGTCGGAAGACTCGACCTCAAGAGTGATGGTCTTGCC 612575 Query 133634 GGTCAGAGTTTTTACGAAAATCTGCAT 133660 ||| || || || |||||||||||||| Sbjct 612576 GGTAAGGGTCTTAACGAAAATCTGCAT 612602 Score = 111 bits (122), Expect = 2e-19 Identities = 139/189 (74%), Gaps = 4/189 (2%) Strand=Plus/Plus Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGTGGACGAG--TCCTCGAGCTGCTTGC 133521 |||||||| ||||| || ||||| || | | | | ||| |||||||||||||| | Sbjct 612099 GTGGACTCCTTCTGAATGTTGTAGTC--CGAAAGGGTACGGCCATCCTCGAGCTGCTTAC 612156 Query 133522 CCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCT 133581 | || | || | ||||||||||||||||||||||| ||||| || |||||| || Sbjct 612157 CAGCAAAGATCAATCGCTGCTGGTCGGGAGGGATGCCCTCCTTATCCTGGATCTTCGACT 612216 Query 133582 TGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAG 133641 ||| | |||| ||||||| | ||| || || | ||||| ||| |||||||| || | Sbjct 612217 TGACGTTGTCAATGGTGTCGGAAGACTCGACCTCAAGGGTGATGGTCTTGCCGGTAAGGG 612276 Query 133642 TTTTTACGA 133650 | || |||| Sbjct 612277 TCTTGACGA 612285 >seq3 Length=5105224 Score = 111 bits (122), Expect = 2e-19 Identities = 112/146 (77%), Gaps = 0/146 (0%) Strand=Plus/Minus Query 133506 TCCTCGAGCTGCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTG 133565 |||||||||||||| || ||| | || || ||||||||||| || || || ||||||||| Sbjct 833569 TCCTCGAGCTGCTTTCCAGCGAAGATCAGACGCTGCTGGTCAGGGGGAATTCCTTCCTTG 833510 Query 133566 TCGGTGATCTTTTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACG 133625 || ||||| ||||| | |||| ||||||| | |||||| |||| ||||| | Sbjct 833509 TCCTGAATCTTGGACTTGACATTGTCAATGGTGTCGGAAGACTCCACCTCGAGGGTGATG 833450 Query 133626 GTTTTGCCGGTCAGAGTTTTTACGAA 133651 || ||||| ||||| || || ||||| Sbjct 833449 GTCTTGCCCGTCAGGGTCTTAACGAA 833424 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 483420697273080