Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Endocalyx_20cinctus_20[genbank_20GCA_5F001600455.1_202016-03-01] 17 sequences; 44,773,950 total letters Query= NC_025412.1 Length=369360 Score E Sequences producing significant alignments: (Bits) Value seq6 122 2e-22 >seq6 Length=3640113 Score = 122 bits (134), Expect = 2e-22 Identities = 151/207 (73%), Gaps = 0/207 (0%) Strand=Plus/Minus Query 206173 CAGATATTTTGCAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGAC 206232 || || ||| ||| || ||||| ||||| || ||||| | || |||||| ||| || Sbjct 611836 CAAATCTTTGTCAAGACCCTCACCGGAAAGACCATCACACTCGAGGTGGAATCTTCGGAT 611777 Query 206233 ACAGTCGAATCAGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAA 206292 || | || || ||| ||||| || || || || || || ||| ||| ||| Sbjct 611776 ACCATTGACAACGTGAAGAGCAAGATCCAGGACAAGGAGGGTATCCCGCCTGACCAGCAA 611717 Query 206293 AGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTC 206352 | |||||||||||||| ||||||||||| ||||| | |||||| ||| |||||| || Sbjct 611716 CGTCTTATCTTCGCCGGTAAGCAGTTGGAGGATGGCCGAACTTTGAGCGACTACAACATC 611657 Query 206353 CAGAAAGAGTCTACTCTTCACCTTGTT 206379 ||||| ||||| ||||||||| | ||| Sbjct 611656 CAGAAGGAGTCGACTCTTCACTTGGTT 611630 Score = 111 bits (122), Expect = 4e-19 Identities = 145/201 (72%), Gaps = 0/201 (0%) Strand=Plus/Minus Query 206173 CAGATATTTTGCAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGAC 206232 ||||| || ||| || | || || || ||||| ||| | || || ||| ||| || Sbjct 612064 CAGATCTTCGTCAAGACCTTGACGGGTAAGACGATTACTCTCGAGGTCGAATCTTCCGAT 612005 Query 206233 ACAGTCGAATCAGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAA 206292 || |||| || ||| ||||||||||| || || || || || ||| ||| Sbjct 612004 ACTATCGACAACGTCAAGTCGAAGATTCAAGACAAGGAGGGTATCCCACCTGACCAGCAA 611945 Query 206293 AGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTC 206352 | || |||||||| ||||||||||||||||||||| | |||||| |||| || ||| | Sbjct 611944 CGTCTCATCTTCGCTGGAAAGCAGTTGGAAGATGGACGAACTTTGTCCGACTATAACATT 611885 Query 206353 CAGAAAGAGTCTACTCTTCAC 206373 |||||||| || || |||||| Sbjct 611884 CAGAAAGAATCCACCCTTCAC 611864 Score = 89.7 bits (98), Expect = 1e-12 Identities = 72/87 (83%), Gaps = 0/87 (0%) Strand=Plus/Plus Query 204769 GTGAAGAGTAGACTCTTTCTGGACATTATAGTCAGCCAAAGTCCTTCCATCTTCCAGCTG 204828 |||||| || || |||||||| | |||||||| | |||||| | ||||||||||| ||| Sbjct 611864 GTGAAGGGTGGATTCTTTCTGAATGTTATAGTCGGACAAAGTTCGTCCATCTTCCAACTG 611923 Query 204829 CTTTCCGGCGAAGATAAGCCGTTGTTG 204855 |||||| |||||||| || ||||| || Sbjct 611924 CTTTCCAGCGAAGATGAGACGTTGCTG 611950 Score = 87.8 bits (96), Expect = 4e-12 Identities = 75/93 (81%), Gaps = 0/93 (0%) Strand=Plus/Plus Query 204763 AACAAGGTGAAGAGTAGACTCTTTCTGGACATTATAGTCAGCCAAAGTCCTTCCATCTTC 204822 ||| | ||||||||| ||||| ||||||| || ||||| |||||| | ||||| || Sbjct 611630 AACCAAGTGAAGAGTCGACTCCTTCTGGATGTTGTAGTCGCTCAAAGTTCGGCCATCCTC 611689 Query 204823 CAGCTGCTTTCCGGCGAAGATAAGCCGTTGTTG 204855 || |||||| |||||||||||||| ||||| || Sbjct 611690 CAACTGCTTACCGGCGAAGATAAGACGTTGCTG 611722 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1181820542584657