Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Endocalyx_20cinctus_20[genbank_20GCA_5F001600455.1_202016-03-01] 17 sequences; 44,773,950 total letters Query= NC_026421.1 Length=182380 Score E Sequences producing significant alignments: (Bits) Value seq1 111 2e-19 >seq1 Length=7732581 Score = 111 bits (122), Expect = 2e-19 Identities = 124/163 (76%), Gaps = 2/163 (1%) Strand=Plus/Minus Query 147231 CAGCTGGTCCACGCCCTGGCCCCCGTAGTTTGTCC-CGCAGTCCACGTACCTGGCCCCAA 147289 |||||| || |||||||| ||| |||| | ||| ||| |||||||||| |||||| | Sbjct 2738686 CAGCTGATCGACGCCCTGACCCGCGTAATCCGTCTTCGC-GTCCACGTACTCGGCCCCGA 2738628 Query 147290 AGTGCCTCCACTGGAAGCCGTACACTGGCCCCAGGTCGCCGGGCTTTCTGTGCGAGAAGC 147349 |||| | ||||||||| |||||||| |||||||||||||| || | ||||| | | Sbjct 2738627 AGTGTCGCCACTGGAACCCGTACACCGGCCCCAGGTCGCCCACCTCGCGATGCGACAGTC 2738568 Query 147350 CCGCCCGCTTGAGAAACTCGGGGGACCCGTGGGCGTCCCAGAT 147392 || | | | ||| |||||| | ||||||| ||||||| || Sbjct 2738567 CCACGCTGTCGAGGAACTCGCGCGACCCGTTCCCGTCCCATAT 2738525 Score = 102 bits (112), Expect = 1e-16 Identities = 119/161 (74%), Gaps = 0/161 (0%) Strand=Plus/Minus Query 146926 TCCACGTGGTTGAGGTAGACGTGCGCGTCCCCCAGGGTGTGCACAAAGTCCCCCGGCTTA 146985 || ||||||| | ||| ||||||||||| |||| | |||| | | ||| ||| Sbjct 2739066 TCGACGTGGTCGCAGTACACGTGCGCGTCGCCCATGACGTGCGTCAGGCTCCCGGGCACG 2739007 Query 146986 AGGCCGGTCACGTGGGCCACCATGTAGGTGAGCAGCGAGTAGCTGGCTATGTTGAAGGGG 147045 || || |||||| || | ||||| || || |||| ||||||||| |||||||| || Sbjct 2739006 AGCTCGCACACGTGCGCGATCATGTGCGTCAGGAGCGCGTAGCTGGCGATGTTGAACGGC 2738947 Query 147046 ACCCCCAGGCCCATGTCCCCCGACCTCTGGTACAGCTGGCA 147086 || |||||||||||||| | || | |||||| ||||| || Sbjct 2738946 ACGCCCAGGCCCATGTCGCAGGAGCGCTGGTATAGCTGACA 2738906 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 583487876008800