Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Endocalyx_20cinctus_20[genbank_20GCA_5F001600455.1_202016-03-01] 17 sequences; 44,773,950 total letters Query= NC_027213.1 Length=214699 Score E Sequences producing significant alignments: (Bits) Value seq11 228 1e-54 >seq11 Length=1431289 Score = 228 bits (252), Expect = 1e-54 Identities = 620/943 (66%), Gaps = 16/943 (2%) Strand=Plus/Minus Query 69277 GATGCTAGATTACAAACTGCTACCTCATTAGAATTTGCATATTGTATTATCTCTGTACAT 69336 || || || || || || || ||||||| || | | || | || ||||| || || Sbjct 452326 GAAGCCAGGTTGCACACAGCGACCTCATCAGGAGCCGAGTACTCAATAATCTCGGTGCAG 452267 Query 69337 AGATTACTACATTTGATAGTCCCCAGATTTTGCTGATTACTCTTTTTGTTACAGGCGTCC 69396 || ||| || ||||| ||||| || | ||| || ||||| ||| ||| ||| Sbjct 452266 AGGTTAGAACTGCGAATAGTTCCCAGGTTCTTCTGGTTGCTCTTGCGGTTGCAGTGATCC 452207 Query 69397 TTGTAAAGAATAAACGGAGTACCAGTTTCAATCTGAGATTCGATAATAGATTTCCAAAC- 69455 |||||||| || || || ||||||| ||| |||||| |||| || | | ||||| Sbjct 452206 TTGTAAAGCATGAATGGGTTACCAGTCTCAGTCTGAGCCTCGAGGATGGCATACCAAAGT 452147 Query 69456 ----GACCCTAGCATTTATTACGGTCTTGTAACGCTTCTCTTTTTCATA-TTGT-GTATA 69509 | ||| | || | ||| | ||| ||| ||| || || | ||| | Sbjct 452146 TTCTGGGCCTTGACCTTCTGGCGGCC-----ACGGCCCTCGGCTTCGTACTTCTCGTACA 452092 Query 69510 TAGCCGTTCGAATTCATCTCCCCAAACATCATCCAATCCAGGACATTCATTTGGACACAT 69569 |||| ||||| ||||| || | || ||| | | ||||| || || || |||||||| Sbjct 452091 GAGCC--TCGAACTCATCGCCGTAGACGTCAGCGAGGCCAGGGCACTCGTTGGGACACAT 452034 Query 69570 CAATGACCACACATCATCATCCTTAACTCGTTTCATAAATAGATCGGGAATCCAAAGAGC 69629 | | ||| || | | | || ||| || ||||| || |||||||||||||| ||||| Sbjct 452033 GAGCGTCCATTCACCGTTCTTCTCAACACGCTTCATGAAAAGATCGGGAATCCAGAGAGC 451974 Query 69630 TATAAAGAGATCTCTGGTTCTATTTTCTTCATTTCCTGTAttttttttAAGATCGAGAAA 69689 | || ||||| | | | | ||| || ||||| || || ||||| | || Sbjct 451973 AAGGAAAAGATCGCGAGCGCGAACTTCCTCCTTTCCGTGGTTCTTACGGAGATCCAAGAA 451914 Query 69690 CTCCATAATATCAGAATGCCATGGTTCTAGATATATCGCCATGACTCCCGGTCGTTTATT 69749 ||| | || ||| || ||||| || || || || || || | | | || |||| || || Sbjct 451913 CTCGAAAACATCCGAGTGCCACGGCTCGAGGTAGATGGCAAAGGCACCAGGTCTCTTGTT 451854 Query 69750 TCCTCCCTGATCTATGTATCTGGCAGTGTTATTATAGACTCTCAGCATCGGAATAATACC 69809 || ||||| || | ||||||||| ||||| || |||| | ||||| || | |||||| Sbjct 451853 GCCACCCTGGTCAACGTATCTGGCCGTGTTGTTGAAGACACGAAGCATAGGTACAATACC 451794 Query 69810 ATTAGATTTACCATTTGTTCCAGAAATATAACTTCCTCTTGCGCGAATATTACTAATAGA 69869 ||||| |||| || || || | ||| ||| ||| | | || ||| || Sbjct 451793 GTTAGAAGTACCGTTGGTACCGGCAATGTAAGATCCGGTAGATCGGATACGGTGAACGTT 451734 Query 69870 TAGACCTATTCCTCCTGCCATTTTAGAGATTAGAGCACAACGTTTCAATGTGTCATATAT 69929 ||||| || || || ||||| || ||||| | ||||||| || | |||||||| || Sbjct 451733 GAGACCAATACCACCCGCCATCTTGGAGATCATAGCACAAGTCTTGAGGGTGTCATAGAT 451674 Query 69930 ACCCTCTATGCTATCATCTATCATGTTAAGAAGAAAACAGCTAGACATTTGATGATGTAT 69989 |||||| ||||| ||||| |||||| | ||| ||||| || | ||| || Sbjct 451673 ACCCTCAATGCTGTCATCCTTCATGTCTACAAGGAAACAAGAGGAAAGCTGAGCCTGGGG 451614 Query 69990 AGTTCCCGCATTAAATAATGTAGGAGATGCGTGAGTGAACCATTTTTCAGAAAGCAGATT 70049 || || || || || | || || || ||||| ||||| |||| || | ||||| Sbjct 451613 GGTACCGGCGTTGAAAAGGGTGGGGGAGGCGTGGGTGAAATATTTGCTGGACATGAGATT 451554 Query 70050 GTATGTTTCAATAGCTGATTCTATATC-CCACTGATGAATTCCTATCGCGACACGCATCA 70108 |||||| ||||| | ||| | || ||| | || || | || |||||||| | Sbjct 451553 GTATGTCTCAATGACCTTTTCAACGTCGTCACCCCAG-ATACCGACGGCAACACGCATGA 451495 Query 70109 ACATATGCTGAGGTCGTTCTACCGTTTTATTATTTATTTTCAACAGGTATGATTTTTCCA 70168 ||| ||||| || || || | |||| ||| | || | ||||||||| |||| Sbjct 451494 TCATGTGCTGCGGCCGCTCGGCAATTTTGCCATTGAGCTTGAGAAGGTATGATCGCTCCA 451435 Query 70169 GAGTTTTAAACCCAAAATAGTTGTATGAAAAGTCTCTTTCGTA 70211 ||| || || ||||| || | ||| ||||||| ||||| Sbjct 451434 AAGTCTTGAAGCCAAAGTATTGGTAGTTGAAGTCTCGGTCGTA 451392 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 686908654031880