Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Endocalyx_20cinctus_20[genbank_20GCA_5F001600455.1_202016-03-01] 17 sequences; 44,773,950 total letters Query= NC_027778.1 Length=124244 Score E Sequences producing significant alignments: (Bits) Value seq4 98.7 8e-16 >seq4 Length=4458946 Score = 98.7 bits (108), Expect = 8e-16 Identities = 311/471 (66%), Gaps = 17/471 (4%) Strand=Plus/Plus Query 19441 AATGGTCCTGAAATCTTAAATAAATATGTAGGTCAATCGGAAGAAAATGTACGACGTTTG 19500 |||||||| || |||| ||||| ||||| |||||||||||||| || | ||| || Sbjct 3743444 AATGGTCCCGAGGTCTTGAATAAGTATGTTGGTCAATCGGAAGAGAACATTCGAAAGATG 3743503 Query 19501 TTTGCTGACGCTGAAGAAGAACAAAAACGTTTAGGGCGCA-AAAGTTCTTTGCACATTAT 19559 ||||| || || || ||||| | ||| | | || | | | ||| | ||||||| || Sbjct 3743504 TTTGCCGATGCGGAGAAAGAATACAAA-GAGAAAGGTGAAGAGAGTGATCTGCACATCAT 3743562 Query 19560 AATACTAGATGAATTGGACGCAATCTGTAAGCAAAGAGGTTCTGGTGTAAATGG-AGTAC 19618 || | || |||||||| || ||||||| || ||||| || | || |||| Sbjct 3743563 CATTTTCGACGAATTGGATGCTGTCTGTAAACAGAGAGGAAGCGGAGCCGGCGGCGGTAC 3743622 Query 19619 A--------TGACACTGTTGTCAATCAACTCCTGTCAAAATTAGACGGTGTTAACCAACT 19670 | ||| | || ||||| || || | |||||| | || ||||| | ||| | Sbjct 3743623 AGGCGTTGGTGATAGCGTGGTCAACCAGCTTTTATCAAAACTTGATGGTGTCGATCAATT 3743682 Query 19671 GAATAATATTTTAGTTATTGGCATGACTAATAGACTGGAATTAATAGACAGCGC-CTTAT 19729 ||||| ||| | |||| || ||||| || | ||| | || ||| || ||| | Sbjct 3743683 AAATAACATTCTGCTTATCGGAATGACCAACCGCAAGGATATGATCGACGATGCTCTTCT 3743742 Query 19730 TACGACCCGGTCGGTTGGAAATAAAGATCGAAATTAACTTACCCGATGAATGTGGACGTG 19789 | |||||||| || | ||| | ||||||| || | ||||||||| || || Sbjct 3743743 T-CGACCCGGACGTCTTGAACTTCAGATCGAGATCTCTCTGCCCGATGAACACGGCCGCC 3743801 Query 19790 TGGAAATTTTAAACATACATACATCAACCATGCGACAAAATAACCTTTTAAATGACGATG 19849 || | ||| | ||||| ||||| || | || || || ||| || |||||||| Sbjct 3743802 TGCAGATTCTTAACATCCATACCTCCAAGATACGGGCAATCAACAAGTTGGCTGACGATG 3743861 Query 19850 TAGATCTAGA-AGAAATTGCAGCGGCT-ACCAAAAACTATAGCGGCGCAGA 19898 | || || || ||| | ||| || | ||||| |||||| ||| || || Sbjct 3743862 TTGA-CTTGATCGAACTAGCA-CGCTTAACCAAGAACTATTCCGGTGCCGA 3743910 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397455917652085