Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Endocalyx_20cinctus_20[genbank_20GCA_5F001600455.1_202016-03-01]
17 sequences; 44,773,950 total letters
Query= NC_030394.2
Length=126965
Score E
Sequences producing significant alignments: (Bits) Value
seq1 120 2e-22
>seq1
Length=7732581
Score = 120 bits (132), Expect = 2e-22
Identities = 145/195 (74%), Gaps = 2/195 (1%)
Strand=Plus/Minus
Query 29621 CTGGGCTCCCTCTCGAGCTGAATCCTCAGCGGTTCCACGTGGTCAAGGTAGACGTGAGCA 29680
|||||||| | ||||||||| | || |||| || |||||||| ||| ||||| ||
Sbjct 2739099 CTGGGCTCGCGCTCGAGCTGCACCCGGAGCGCATCGACGTGGTCGCAGTACACGTGCGCG 2739040
Query 29681 TCTCCCAGGGTGTG-GACAAACTCTCCCGGTTCTAGCCCGGTGACGTGAGCCATCATGTA 29739
|| |||| | ||| | || ||| || || | ||| || ||||| || |||||||
Sbjct 2739039 TCGCCCATGACGTGCGTCAGGCTC-CCGGGCACGAGCTCGCACACGTGCGCGATCATGTG 2738981
Query 29740 CGTGAGGAGAGAGTAGCTGGCGATGTTAAAGGGCACCCCGAGCCCCATGTCCCCTGACCT 29799
||| ||||| | ||||||||||||||| || ||||| || || |||||||| | || |
Sbjct 2738980 CGTCAGGAGCGCGTAGCTGGCGATGTTGAACGGCACGCCCAGGCCCATGTCGCAGGAGCG 2738921
Query 29800 CTGGTAGAGCTGGCA 29814
|||||| ||||| ||
Sbjct 2738920 CTGGTATAGCTGACA 2738906
Score = 98.7 bits (108), Expect = 8e-16
Identities = 150/210 (71%), Gaps = 4/210 (2%)
Strand=Plus/Minus
Query 30015 CGAAATGCCTCCACTGGAACCCGTACACCGGTCCCAGGTCTCCCTCTTCCCTGTGCTCGA 30074
|||| || | ||||||||||||||||||||| |||||||| ||| | || | || |||
Sbjct 2738630 CGAAGTGTCGCCACTGGAACCCGTACACCGGCCCCAGGTCGCCCACCTCGCGATG--CGA 2738573
Query 30075 -AGCCCCTC-TTGTCCAAAAAGTCTCTGGAACCGTTGGCGTCCCAGATCTTTACCCCCTT 30132
|| ||| | |||| | || || | || ||||| ||||||| ||||| |||||
Sbjct 2738572 CAGTCCCACGCTGTCGAGGAACTCGCGCGACCCGTTCCCGTCCCATATCTTGACCCCGGC 2738513
Query 30133 CTCGGAGAGCTCTTTGGAGTTTGTGGACCCTCTGACGAACCACAGCAGCTCCTCCACGAC 30192
||| || ||| | || ||| ||| |||||||| || |||||| | |||||
Sbjct 2738512 CTCCGATAGCGCCAGCGACGACGTGTTCCCCTCCACGAACCATAGAAGCTCCGCTACGAC 2738453
Query 30193 GGCCTTCCAAAAGACCCTCTTGGTCGTGAG 30222
|||||| ||||||| ||| ||||| ||
Sbjct 2738452 GGCCTTGAGGAAGACCCGCTTCGTCGTCAG 2738423
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 406163115848062
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |