Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Endocalyx_20cinctus_20[genbank_20GCA_5F001600455.1_202016-03-01] 17 sequences; 44,773,950 total letters Query= NC_030394.2 Length=126965 Score E Sequences producing significant alignments: (Bits) Value seq1 120 2e-22 >seq1 Length=7732581 Score = 120 bits (132), Expect = 2e-22 Identities = 145/195 (74%), Gaps = 2/195 (1%) Strand=Plus/Minus Query 29621 CTGGGCTCCCTCTCGAGCTGAATCCTCAGCGGTTCCACGTGGTCAAGGTAGACGTGAGCA 29680 |||||||| | ||||||||| | || |||| || |||||||| ||| ||||| || Sbjct 2739099 CTGGGCTCGCGCTCGAGCTGCACCCGGAGCGCATCGACGTGGTCGCAGTACACGTGCGCG 2739040 Query 29681 TCTCCCAGGGTGTG-GACAAACTCTCCCGGTTCTAGCCCGGTGACGTGAGCCATCATGTA 29739 || |||| | ||| | || ||| || || | ||| || ||||| || ||||||| Sbjct 2739039 TCGCCCATGACGTGCGTCAGGCTC-CCGGGCACGAGCTCGCACACGTGCGCGATCATGTG 2738981 Query 29740 CGTGAGGAGAGAGTAGCTGGCGATGTTAAAGGGCACCCCGAGCCCCATGTCCCCTGACCT 29799 ||| ||||| | ||||||||||||||| || ||||| || || |||||||| | || | Sbjct 2738980 CGTCAGGAGCGCGTAGCTGGCGATGTTGAACGGCACGCCCAGGCCCATGTCGCAGGAGCG 2738921 Query 29800 CTGGTAGAGCTGGCA 29814 |||||| ||||| || Sbjct 2738920 CTGGTATAGCTGACA 2738906 Score = 98.7 bits (108), Expect = 8e-16 Identities = 150/210 (71%), Gaps = 4/210 (2%) Strand=Plus/Minus Query 30015 CGAAATGCCTCCACTGGAACCCGTACACCGGTCCCAGGTCTCCCTCTTCCCTGTGCTCGA 30074 |||| || | ||||||||||||||||||||| |||||||| ||| | || | || ||| Sbjct 2738630 CGAAGTGTCGCCACTGGAACCCGTACACCGGCCCCAGGTCGCCCACCTCGCGATG--CGA 2738573 Query 30075 -AGCCCCTC-TTGTCCAAAAAGTCTCTGGAACCGTTGGCGTCCCAGATCTTTACCCCCTT 30132 || ||| | |||| | || || | || ||||| ||||||| ||||| ||||| Sbjct 2738572 CAGTCCCACGCTGTCGAGGAACTCGCGCGACCCGTTCCCGTCCCATATCTTGACCCCGGC 2738513 Query 30133 CTCGGAGAGCTCTTTGGAGTTTGTGGACCCTCTGACGAACCACAGCAGCTCCTCCACGAC 30192 ||| || ||| | || ||| ||| |||||||| || |||||| | ||||| Sbjct 2738512 CTCCGATAGCGCCAGCGACGACGTGTTCCCCTCCACGAACCATAGAAGCTCCGCTACGAC 2738453 Query 30193 GGCCTTCCAAAAGACCCTCTTGGTCGTGAG 30222 |||||| ||||||| ||| ||||| || Sbjct 2738452 GGCCTTGAGGAAGACCCGCTTCGTCGTCAG 2738423 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 406163115848062