Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Endocalyx_20cinctus_20[genbank_20GCA_5F001600455.1_202016-03-01] 17 sequences; 44,773,950 total letters Query= NC_031033.1 Length=217124 Score E Sequences producing significant alignments: (Bits) Value seq11 185 1e-41 >seq11 Length=1431289 Score = 185 bits (204), Expect = 1e-41 Identities = 468/708 (66%), Gaps = 4/708 (1%) Strand=Plus/Minus Query 77913 GTATATAGCCGTTCAAATTCATCTCCCCAAACATCATCCAATCCAGGGCATTCATTTGGG 77972 ||| | |||| || || ||||| || | || ||| | | |||||||| || || || Sbjct 452096 GTACAGAGCC--TCGAACTCATCGCCGTAGACGTCAGCGAGGCCAGGGCACTCGTTGGGA 452039 Query 77973 CACATCAATGACCAGTCACCATCTTCCTTAACTCGTTTCATAAAGAGATCAGGTATCCAT 78032 ||||| | | ||| ||||| | | || ||| || ||||| || ||||| || ||||| Sbjct 452038 CACATGAGCGTCCATTCACCGTTCTTCTCAACACGCTTCATGAAAAGATCGGGAATCCAG 451979 Query 78033 AGAGCAATAAATAGATCTCGGGTTCTATGTTCTTCATTTCCTGTATTCTTTTTAAGATCG 78092 ||||||| || ||||| || | | | ||| || ||||| ||||| ||||| Sbjct 451978 AGAGCAAGGAAAAGATCGCGAGCGCGAACTTCCTCCTTTCCGTGGTTCTTACGGAGATCC 451919 Query 78093 AGAAACTCCATAATATCAGAATGCCATGGTTCTAGATATATTGCCATAACTCCAGGTCGT 78152 | ||||| | || ||| || ||||| || || || || || || | | ||||||| Sbjct 451918 AAGAACTCGAAAACATCCGAGTGCCACGGCTCGAGGTAGATGGCAAAGGCACCAGGTCTC 451859 Query 78153 TTATTACCTCCCTGATCTATATATCTGGCGGTGTTATTATAAACTCTCAACATTGGAATA 78212 || || || ||||| || | |||||||| ||||| || | || | | ||| || | | Sbjct 451858 TTGTTGCCACCCTGGTCAACGTATCTGGCCGTGTTGTTGAAGACACGAAGCATAGGTACA 451799 Query 78213 ATACCGTTAGATGTTCCATTTGTTCCAGAAATATAACTTCCACTTGCGCGAATATTACTA 78272 ||||||||||| || || || || || | ||| ||| ||| | | || ||| | Sbjct 451798 ATACCGTTAGAAGTACCGTTGGTACCGGCAATGTAAGATCCGGTAGATCGGATACGGTGA 451739 Query 78273 ATGGATATCCCTATTCCTCCTGCCATCTTAGATATTAGAGCGCAACGTTTCAATGTATCG 78332 | | | || || || || |||||||| || || | ||| ||| || | || || Sbjct 451738 ACGTTGAGACCAATACCACCCGCCATCTTGGAGATCATAGCACAAGTCTTGAGGGTGTCA 451679 Query 78333 TAGATACCCTCTATACTGTCATCCATCATGTTAAGAAGAAAACAGCTAGACATTTGATGA 78392 ||||||||||| || ||||||||| |||||| | ||| ||||| || | ||| Sbjct 451678 TAGATACCCTCAATGCTGTCATCCTTCATGTCTACAAGGAAACAAGAGGAAAGCTGAGCC 451619 Query 78393 TGAACAGTTCCTGCATTAAATAATGTCGGAGATGCATGCGTAAACCATTTTTCAGAAAGT 78452 || || || || || || | || || || || || || || |||| || | Sbjct 451618 TGGGGGGTACCGGCGTTGAAAAGGGTGGGGGAGGCGTGGGTGAAATATTTGCTGGACATG 451559 Query 78453 AGATTGTATGTTTCAATAGCTGATTCTATGTC-CCATTGATGAATTCCTACCGCTACACG 78511 ||||||||||| ||||| | ||| | ||| || | || || || || ||||| Sbjct 451558 AGATTGTATGTCTCAATGACCTTTTCAACGTCGTCACCCCAG-ATACCGACGGCAACACG 451500 Query 78512 CATCAACATATGCTGAGGTCTTTCAACCGTCTTATTATTTATTTTCAACAAGTATGATTT 78571 ||| | ||| ||||| || | || | | || ||| | || | | ||||||| Sbjct 451499 CATGATCATGTGCTGCGGCCGCTCGGCAATTTTGCCATTGAGCTTGAGAAGGTATGATCG 451440 Query 78572 TTCCAAAGTTTTAAAACCAAAATAGTTGTATGAAAAGTCTCTCTCGTA 78619 |||||||| || || ||||| || | ||| ||||||| ||||| Sbjct 451439 CTCCAAAGTCTTGAAGCCAAAGTATTGGTAGTTGAAGTCTCGGTCGTA 451392 Score = 122 bits (134), Expect = 1e-22 Identities = 376/577 (65%), Gaps = 6/577 (1%) Strand=Plus/Minus Query 76770 TTCTT-ATCCAATGTAAACTGAATTGGAGAAGATGCGGGTTTTGTACGTAGATAGTACAT 76828 ||||| ||||| || ||||| || || | || | || ||||| ||||||||||| Sbjct 453251 TTCTTGATCCACGGTGAACTGGATGGGCTGGGCGGCAGCTTGGGTACGGAGATAGTACAT 453192 Query 76829 ACCAGTTTTTAGACCCAGACTCCATCCGTAGAAATGCATGCTTGTCAGTTTGGAATAACT 76888 || || || ||||| || |||| || ||| |||||||| || | ||| | | Sbjct 453191 TCCCGTCTTGAGACCGAGCTTCCAACCCGTGAAGTGCATGCTCGTGATCTTGCCCATAGT 453132 Query 76889 AGGATCGGCTATATGAATATTCATCGACTGACTTTGATCGATGAAAGCTCCTCTATCAGC 76948 || || || ||||| || | ||||| ||||||||||| || || | || || Sbjct 453131 GGGTTCTCTCATGTGAATGTTAAGAGACTGGGACTGATCGATGAACGCACCACGGTCGGC 453072 Query 76949 CGCCATTTTTATAATGGTCTTTTGAGGAATTTCCCAAATAGTTTTGAAAACTTGTTTGAT 77008 ||||| | | || ||| |||| |||||||||| || ||| | | | ||||| Sbjct 453071 AGCCATCTGGACAACGGTACGCTGAGAGATTTCCCAAACCGTCTTGTACAATGCCTTGAT 453012 Query 77009 ATCATCTGGAAGGTTTG---TATTTTGAATGGAACCACCATCTGATATAATTGTATTCTT 77065 |||| | |||| | | | | || || || |||||||| || | ||||| ||||| Sbjct 453011 ATCAGCAGGAATGCTGGGGATGTTCTGGATCGAACCACCTTCGGCAATAATGCGGTTCTT 452952 Query 77066 TATATCATCATTCCACAATTTCCTCTCTGTTAAAACTCTAAGGAGATGAGGATTAACTAT 77125 || | ||| ||||| | | || | | | || || ||| ||||| | Sbjct 452951 CATGTTGTCAGACCACAGACCCATGTCGACAAGGTCCTTGAGTAGCCAAGGGTTAACAAC 452892 Query 77126 TTGAAATTCTCCAGACAATACTCTACGAGTGTAAATATTACTGGTATATGGTTCCACAGA 77185 || || ||||| | | || | ||| | ||| || || ||| || || || | | Sbjct 452891 CTGGAACTCTCCCGCGAGGACACGACGCGAGTAGATGTTGGAGGTGTAAGGCTCAAAGCA 452832 Query 77186 TTCATTGTTTCCCAAAATTTGAGCAGTAGAAGCAGTTGGCATAGGTGCCACCAATAAACT 77245 |||||||| ||||| ||||| | ||| || || ||||| || || ||||| ||||| Sbjct 452831 CTCATTGTTACCCAAGATTTGCGAAGTGCTGGCTGTGGGCATGGGGGCGACCAACAAACT 452772 Query 77246 ATTTCTGAGACCATG-TGTTCTGATTTTATCTTTTAGATATTTCCAATCCCAAAGATCTG 77304 || | || ||| || || | |||| | | |||||| | ||| ||||| ||||| | Sbjct 452771 GTTACGGACACCGTGCTGCT-TGATCTGCTGCTTTAGACTATCCCAGTCCCAGAGATCGG 452713 Query 77305 AAGGTACAACATCCCAAAGATCGTATTGTAGAATTCC 77341 || |||||||| | |||||||| || || || Sbjct 452712 TGGGCTTGACATCCCACATGTCGTATTGAAGGATACC 452676 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 694668652382880