Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Endocarpon_20pusillum_20[genbank_20GCA_5F000611755.1_202014-04-02] 40 sequences; 37,173,200 total letters Query= NC_001623.1 Length=133894 Score E Sequences producing significant alignments: (Bits) Value seq9 86.0 5e-12 >seq9 Length=1292822 Score = 86.0 bits (94), Expect = 5e-12 Identities = 91/120 (76%), Gaps = 0/120 (0%) Strand=Plus/Minus Query 29046 AAAATTGCCGATAAAGAAGGTGTGCCCGTAGATCAACAAAGACTTATCTTTGCGGGCAAA 29105 |||||| || || || ||| | ||| ||||| ||| |||||||||| || || ||| Sbjct 437043 AAAATTCAGGACAAGGAGGGTATTCCCCCGGATCAGCAACGACTTATCTTCGCTGGTAAA 436984 Query 29106 CAACTGGAAGATTCCAAAACTATGGCCGATTACAATATTCAGAAGGAATCTACTCTTCAC 29165 ||||| |||||| | ||| | |||| ||||| || ||||| ||||||||||||||| Sbjct 436983 CAACTCGAAGATGGCCGAACCCTATCCGACTACAACATCCAGAAAGAATCTACTCTTCAC 436924 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 428335791186200