Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Endocarpon_20pusillum_20[genbank_20GCA_5F000611755.1_202014-04-02] 40 sequences; 37,173,200 total letters Query= NC_005832.1 Length=106332 Score E Sequences producing significant alignments: (Bits) Value seq3 89.7 3e-13 >seq3 Length=2327013 Score = 89.7 bits (98), Expect = 3e-13 Identities = 160/234 (68%), Gaps = 0/234 (0%) Strand=Plus/Plus Query 25740 CTGATCCACCCCCATCCCCGAGTAGTCTGCCCTCATGTCCGTGTACTCTGCTCCGAAATA 25799 |||||| |||||| |||| |||||| || ||| |||||||| || ||||| | Sbjct 590088 CTGATCGACCCCCTTCCCTTGGTAGTCGGCGTGGCAGTCGGTGTACTCGGCGCCGAAGTG 590147 Query 25800 CCTCCACTGGAACCCGTACACCGGTCCTAGGTCTCCATCTTCCCTGTGCTCAAAGCCCCT 25859 | ||||||||| ||||| |||||||||||||| || ||||||| || ||||| Sbjct 590148 GCGCCACTGGAAGCCGTAGACCGGTCCTAGGTCGCCTTCTTCCCGCGACTGGAAGCCGAG 590207 Query 25860 CTTATCCAAAAAGTCTCTGGAACCATTGGCGTCCCAGATCTTTACCCCCTTCTCGGAGAG 25919 || | || | | || |||||| |||||||||| | | ||| ||||||||| Sbjct 590208 TGCGTCGAGGTAGGCGCGCGACCCATTGCCGTCCCAGATGTGGATCCCGGCCTCGGAGAG 590267 Query 25920 CTCTTTGGAGTTTGTGGACCCTCTGACGAACCACAGCAGCTCCGCCGTGACGGC 25973 |||| ||| | || || |||||| || || || | |||||||| Sbjct 590268 GGGGAGGGAGGAGGTGCAGCCCGAGAGGAACCAGAGGAGTTCGGTGGTGACGGC 590321 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 340137434182920