Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Endocarpon_20pusillum_20[genbank_20GCA_5F000611755.1_202014-04-02] 40 sequences; 37,173,200 total letters Query= NC_006998.1 Length=194711 Score E Sequences producing significant alignments: (Bits) Value seq9 264 1e-65 seq18 178 2e-39 >seq9 Length=1292822 Score = 264 bits (292), Expect = 1e-65 Identities = 573/849 (67%), Gaps = 10/849 (1%) Strand=Plus/Minus Query 33013 TTTTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTTTTTCCTTCCAATGATATATTT 33072 ||||| || |||||||| || || ||||| || || ||||| || | | || ||||| Sbjct 487334 TTTTGATAGTCACCCACGCGCTTCTCGAAGAAGTTGGTTTTGCCAGCAAGAGAGATATTG 487275 Query 33073 TCCATGAAATCAAACGGATTGGTAACATTATAAAtttttttAAATCCCAATTCAGAAATC 33132 |||||||| || || ||||| |||||||| |||| || || || | || || Sbjct 487274 TCCATGAAGTCGAAGGGATTCGTAACATTGTAAAACTTGTTGTTGCCAAGAGCAACAAGT 487215 Query 33133 AATCTATCCGCGACGAATTCTATATATGTTTTCATCATTTCACAATTCATTCCTATAAGT 33192 | | ||| || || ||||| || ||| ||||||| | ||||| || | | | Sbjct 487214 AGACGATCAGCAACAAATTCAATGTATTGCTTCATCAAGGTCGAGTTCATGCCGAGCAAT 487155 Query 33193 TTAACTGGAAGAGCCGCAGTAAGAAATTCTTGTTCAATGGATACCGCATCTGTTATAATA 33252 || ||||| |||| ||||| ||||| || || || || || ||||| || Sbjct 487154 GCGCACGGCAGAGCATCAGTGAGAAACTCTTGCTCGATCACGACTGCCTCGGTTATGATG 487095 Query 33253 GAT-CTAACGGTTTCTTCACTCGGTGGATGCAATAAATGTTTAAACATCAAACATGCGAA 33311 | ||| || | ||| | ||| || || || |||| | || || || Sbjct 487094 TCTTCTACCGCCTGCTTTGAT-GGTCTGTGGTTTAGGTGGGAGAACAAGAGGCAGGCAAA 487036 Query 33312 ATCGCAGTGCAGACCCTCGTCTCTACTAATTAGTTCGTTGGAAAACGTGAGTCCGGGCAT 33371 ||| |||||||||||||| | | || || || || || || ||||| || ||||| Sbjct 487035 ATCTGTATGCAGACCCTCGTCACGAGAGATCAGCTCATTCGAGAAGGTGAGACCTGGCAT 486976 Query 33372 TAGGCCACGCTTTTTAAGCCAAAATATGGAAGCGAATGATCCAGAAAAGAAGATTCCTTC 33431 ||||||||||| || |||||||| | || ||||| || ||||||||||||||||| || Sbjct 486975 CAGGCCACGCTTCTTGAGCCAAAAGACAGATGCGAAGGAGCCAGAAAAGAAGATTCCCTC 486916 Query 33432 TACTGCAGCAAAGGCAATAAGTCTCTCTCCATAA-CCGGCGC--TGTCATGTATCCACTT 33488 || || || ||||||| ||| | | || || || | | |||| ||||| Sbjct 486915 GACGGCTGCGAAGGCAACAAGGCGTTGAGCAAAAGTCGACTCCTTGTCCGAAATCCATCG 486856 Query 33489 TTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGTTTCTATGGCATTAAAGAGATA 33548 ||||||| | ||| || ||| | ||||| || || || ||||| | || || || Sbjct 486855 AAGAGCCCAGTTGGCTTTTTTTCGGATGCAAGGAATGGTGTCAATGGCGTCGAACAGGTA 486796 Query 33549 GtttttttCATTACTATCTTTAACATAAGTATCGATCAAAAGACTATACATTTCCGAATG 33608 | | ||| || || || | || || || ||||| | ||| ||||| ||||| || Sbjct 486795 TTGTCTTTGTTTTGGCTCCTTGATGTACGTGTCAATCAACAAACTGTACATCTCCGAGTG 486736 Query 33609 AATGTTTTCAATGGCCATCTGAAATCCGTAGAAACATCTAGCCTCGGTAATCTGTACTTC 33668 |||||| || || || ||||| || ||||| || | |||||||| || || ||||| Sbjct 486735 AATGTTCTCCATCATGATTTGAAAGCCATAGAAGCACCGAGCCTCGGGTATTTGGACTTC 486676 Query 33669 TGTACAAAATCGTTCCGCCAAATTTTCATTCACTATTCCGTCACTGGCTGCAAAAAACGC 33728 |||||||||| | | ||||||||| || || || |||||||| ||||| || || Sbjct 486675 GCCTGAAAATCGTTCGACGAGATTTTCATTGACAATGCCATCACTGGCAGCAAAGAAGGC 486616 Query 33729 CAATACATGTTTTATAAAATATTTTTCGTC-TGGTGTTA---GTTTATTCCAATCATTGA 33784 | || || | || ||| ||||||| | || ||| ||| | |||| |||| Sbjct 486615 AAGGACGTGGGAGACGAAGTATCTTTCGTCATCGT-TTAGACGTTCACTCCAGTCATGTT 486557 Query 33785 TATCTTTAGATATATCTACTTCTTCCACTGTCCAAAATGATGCCTCTGCCTTTTTATACA 33844 |||||| || | || |||||||| ||||||| || || || || || || ||||||| Sbjct 486556 GATCTTTTGACAGGTCGACTTCTTCTGCTGTCCAGAAAGAAGCTTCGGCTTTCTTATACA 486497 Query 33845 TGTTCCAGA 33853 | | ||||| Sbjct 486496 TCTGCCAGA 486488 >seq18 Length=894979 Score = 178 bits (196), Expect = 2e-39 Identities = 1199/1904 (63%), Gaps = 59/1904 (3%) Strand=Plus/Minus Query 61983 TCCTTGTCCAATGTGAATTGAATGGGAGCGGATGCGGGTTTCGTACGTAGATAGTACATT 62042 |||| ||||| |||||| || ||||| || || |||| | ||||| || ||||||||| Sbjct 725523 TCCTGGTCCACTGTGAACTGGATGGGTGCAGAGGCGGCCATGGTACGCAGGTAGTACATT 725464 Query 62043 CCCGTTTTTAGACCGAGACTCCATCCGTAAAAATGCATACTCGTTAGTTTGGAATAACTC 62102 ||||| || | || || |||| || ||||||||| || | ||| | Sbjct 725463 CCCGTCTTCAAGCCAAGTTTCCACCCAGCAAAATGCATGGAGGTGATCTTGCCCATGGTA 725404 Query 62103 GGATCTGCTATATGGATATTCATAGATTGACTTTGATCGATGAAGGCTCCCCTGTCTGCA 62162 || || | ||| ||||| | ||| || ||| || ||||| || |||| || ||| Sbjct 725403 GGCTCCTTGAGATGAATATTTAGAGACTGGGATTGGTCAATGAATGCACCCCGATCAGCA 725344 Query 62163 GCCATTTTTATGATCGTCTTTTGTGGAATTTCCCAAATAGTTTTATAAACTCGCTTAATA 62222 ||||| | | || || ||| || ||||||| ||| || || | | || ||| Sbjct 725343 GCCATCTGCACAATAGTTCGTTGGCTGATCTCCCAAACAGTCTTGTACAATGCTTTGATA 725284 Query 62223 TCTTCTGGAAGGTTTG---TATTCTGAATGGATCCACCATCTGCCATAATCCTATTCTTG 62279 || | |||| ||| | |||| || | || || ||||| || || || || ||||| Sbjct 725283 TCAGCAGGAATGTTGGGAATATTTTGGACTGAGCCGCCATCAGCAATGATTCTGTTCTTC 725224 Query 62280 ATCTCATCATTCCATAATTTTCTCTCGGTTAAAACTCTAAGGAGATGCGGATTAACTACT 62339 || | || ||| | || | | || | | || ||||| || || Sbjct 725223 ATGTTGTCGGACCAGAGACCCAGATCAACAAGATCTTTCAACAGCCATGGATTGACGACC 725164 Query 62340 TGAAATTCTCCAGACAATACTCTCCGAGTGTAAATATTACTGGTATACGGTTCCACCGAC 62399 || |||||||||| || || | |||| ||| ||||| |||||| || || | || Sbjct 725163 TGGAATTCTCCAGCCAGGACGCGACGAGAGTAGATATTCGAGGTATATGGCTCGAAACAC 725104 Query 62400 TCATTATTTCCCAAAATTTGAGCAGTTGATGCAGTCGGCATAGGTGCCACCAATAAACTA 62459 || || |||||||| || || | || ||||| ||||||||||| ||||| | | | Sbjct 725103 TCGTTGTTTCCCAAGATCTGGGAGGTGGATGCTGTCGGCATAGGCGCCACAAGGAGAGAG 725044 Query 62460 TTTCTAAGACCGTATGTTCTGATTTTATCTTTTAGAGGTT-CCCAATTCCAAAGATCCGA 62518 || | || ||| | | ||| | | | || | || | |||||| ||| | |||||| Sbjct 725043 TTGCGAACACCATGCTTGGCGATGTCAGCCTTCA-AGCTGGCCCAATCCCACAAATCCGA 724985 Query 62519 CGGTACAACNNNNNNNNNNNNNNNTTGTAGAATACCGTT----ACTGGCGTACGATCCTA 62574 |||| || || || || || ||||| | || || || Sbjct 724984 CGGTGTGACGCCCCACATGTCGTACTGAAGCTCGCCTTTCGAGACTGGAGAACCCTCGTA 724925 Query 62575 CATATGTATCGTATGGTCCTTCCTTCTCAGCTAGTTCACAACTCGCCTCTAATGCACCGT 62634 | || || |||| ||| || | || || ||||| || | ||| || | Sbjct 724924 C----GTCTCATATGTTCCGAGCTCTTTGGCAAGCTCACAGGAGGCAGTGAGTGCGCCAT 724869 Query 62635 AATAAATGGTTTCGAAGATCTTCTTATTTAGATCTTGTGCTTCCAGGCTATCAAATGGAT 62694 ||| || ||||| || |||| | ||||| | ||||||| | ||| ||||| Sbjct 724868 GATAGATCGTTTCAAATATCTGGGTGTTTAGTTGACGTGCTTCAGGAGAATCGAATGGCA 724809 Query 62695 AATTTAAGAGAATAAACGCGTCCGCTAATCCTTGAACACCAATACCGATAGGTCTATGTC 62754 | || || ||| || || || | || |||||||||| ||| ||||||||||||| Sbjct 724808 GACGCAATGCAAGAAAGGCATCTGCAAGACCCTGAACACCAAGACCAATAGGTCTATGTC 724749 Query 62755 TCTTATTAGAGATTTCAGCTT-----CTGGAATAGGATAATAATTAATATCTATAATTTT 62809 ||| ||| || | || || | ||||||| | || || | | | Sbjct 724748 GGAAATTGC----TTCGGCGTGCCTCCTCGACT-GGATAATGGCTGCGTTCGATGACTCT 724694 Query 62810 ATTGAGATTTC-TGACAATTACTTTGACCACATCCTTCAGTTTGAGAAAATCAAA-TCGC 62867 || || || | || || || | |||||| || | || | ||| || | |||| Sbjct 724693 GTTCAGGTTGCGTGTCACG-ACCTGGACCACTTCGTGGAGGCGGCCAAAGTCGTACTCGC 724635 Query 62868 C-CATCTATTACAAACAT--GTTC-AAG-GCAACAGATGCCAGATTACAAACGGCTACCT 62922 | | | | | ||||| || ||| || | ||||||||||| ||||| || |||| Sbjct 724634 CTCGACCAGAATCAACATAAGTGGGAAGAGCCAACGATGCCAGATTGCAAACTGCGACCT 724575 Query 62923 CATTAGCATCCGCA-TATTGTATTATCTCAGTGCAAAGATTACTACACTTGATAGTTCCT 62981 ||| | | ||| |||| | ||||||||||| ||||| | |||||| || Sbjct 724574 CATCTGG-TGCGCTGTATTCAACAATCTCAGTGCAGAGATTGGAGCTTCGGATAGTCCCA 724516 Query 62982 AAATTTTGTTGATTACTCTTTTTGTTACACGCATCCTTATAAAGAATGAATGGAGTACCA 63041 | || | || || ||||||||||||||||||||||||||||| ||| | || || ||| Sbjct 724515 AGGTTCTTCTGGTTGCTCTTTTTGTTACACGCATCCTTATAAAGCATGTACGGCGTCCCA 724456 Query 63042 GTTTCAATCTGAGATTCTATAATCGCTTTCCAGACGACTC-GAGCCTTTATTATAGATTT 63100 || || ||||||| || | ||| || | ||||| | || | |||| | | || ||| Sbjct 724455 GTCTCTGTCTGAGACTCAAGAATTGCATACCAGA-GTTTCTGGGCCT---TCACAGCTTT 724400 Query 63101 -GTATCTC--CTTTCTCTTTCGTATAGTGTATACAATCGTTCGAACTCGTCTCCCCAAAC 63157 | | | | ||| | |||||| || | | ||||||||||| || | || Sbjct 724399 CCGACCACGGCCTTCCTTCTCGTATCTCTCGTAAAGTGCCTCGAACTCGTCACCATACAC 724340 Query 63158 ATTGTCCAATCCAGGACATTCATCCGGACACATCAACGACCACTCTCCGTCATCCTTCAC 63217 || ||| || ||| || | || || | | | ||| || | | || || Sbjct 724339 ATCTGCCAGGCCTGGAGCCTCGTGAGGGCAGAAGAGAGTCCAGTCAAGATTCTTCTCGAC 724280 Query 63218 TCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATA-AATAGATCTCTGGTTCTATGTT 63276 |||||||| || || || || |||| ||||| ||| || ||||||| || | || Sbjct 724279 ACGTTTCATGAATAGGTCTGGGGTCCAGAGAGC-ATAGAAGAGATCTCGGGCCCGGCTTT 724221 Query 63277 CCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGGTT 63336 |||| || || |||||| ||| || | || | | | || | |||||| || | Sbjct 724220 CCTCCTTGCCGTGATTCTTGCGAAGGTCCAAAAAGTCAAAGACGTCGGCATGCCATGGCT 724161 Query 63337 CCAAGTATATGGCCATAACTCCAGGCCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGG 63396 | | ||||| || | | || || || ||||| || || ||||| | || | ||||| Sbjct 724160 CAAGATATATAGCGAAGGCACCCGGACGCTTGTTGCCGCCTTGATCGACATAACGAGCGG 724101 Query 63397 TGTTATTATAAACTCTCAACATTGGAATAATACCGTTTGATATACCATTGGTACCGGAGA 63456 |||| || | || | ||||| ||| | | ||||| ||| ||||| || || | Sbjct 724100 TGTTGTTGAAGACGCGTAACATAGGAGTCAATCCGTTGGATGACCCATTTGTGCCACCAA 724041 Query 63457 TATAGCTTCCACTGGCACGAATATTACTAATTGAT-AGACCTATTCCCCCTGCCATTTTA 63515 | ||| ||| | || ||||| | | | | | || || || || || || | || Sbjct 724040 TGTAGGAACCAGTAGCGCGAAT-GCAGTGAACGTTGAGCCCAATACCTCCAGCGTTCTTG 723982 Query 63516 GAGATTAATGCGCATCGTTTTAACGTGTCATAGATACCCTCTATGCTATCATCGATCATG 63575 ||||| | || || ||| | ||||| ||||| || || || || || || |||| Sbjct 723981 GAGATCATGGCACAGATTTTGAGAGTGTCGTAGATGCCTTCAATACTGTCCTCTTTCATA 723922 Query 63576 TTAAGTAGAAAACAGCTAGACATTTGGTGACGACTAGTTCCCGCATTAAATAAGGTAGGA 63635 | | || || ||| | || || | || || || || || | |||||| Sbjct 723921 TCGATGAGGAAGCAGGACGCCAACTGTCCTTGCGGTGTACCAGCGTTGAACAGCGTAGGA 723862 Query 63636 GAAGCGTGCGTAAACCATTTTTCAGAAAGTAGATTGTACGTCTCAATAGCTGAGTCTATA 63695 ||||| || || || | |||| || | || ||||| || ||||| || || || Sbjct 723861 GAAGCATGTGTGAAGAACTTTTGGGACATGAGGTTGTAAGTTTCAATCGCCCTCTCGATG 723802 Query 63696 TC----CCATTGATGAATTCCTACTGCGACACGCATTAACATGTGCTGAGGTCTTTCAAC 63751 || |||| |||| || || | |||||||| | |||||| || ||||| ||| | Sbjct 723801 TCGTCGCCATGGATG----CCCACAGAAACACGCATAAGCATGTGTTGGGGTCTCTCAGC 723746 Query 63752 GATCTTG-TTGTTTATTTTCAACAAGTAGGATTTTTCCAAAGTTTTAAAACCAAAATAGT 63810 | |||| || || || | | || || |||||||||||| || || ||||| | Sbjct 723745 TA-CTTGTTTACCAATCTTGAGGAGATATGAACGTTCCAAAGTTTTGAAGCCGAAATATT 723687 Query 63811 TGTA--TGAAAAGTCTCGTTCGTAAATAATAACCGAGTTGAGTT 63852 ||| ||||| |||| || || | ||| | ||||| |||| Sbjct 723686 GGTAATTGAAA--TCTCTGTCATAGACGATAGCAGAGTTCAGTT 723645 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 622946888526400