Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Endocarpon_20pusillum_20[genbank_20GCA_5F000611755.1_202014-04-02] 40 sequences; 37,173,200 total letters Query= NC_007151.1 Length=149622 Score E Sequences producing significant alignments: (Bits) Value seq9 111 2e-19 >seq9 Length=1292822 Score = 111 bits (122), Expect = 2e-19 Identities = 164/229 (72%), Gaps = 4/229 (2%) Strand=Plus/Minus Query 26769 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATTAGAATCAAAC 26828 |||||| | || || || ||||| || || || | |||||| | ||| | ||||| | Sbjct 436899 ATGCAAATCTTCGTCAAGACATTGACCGGCAAGACCATCACCTTAGAAGTTGAATCGTCC 436840 Query 26829 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGATCAA 26888 ||||||||||| | || || ||||| || || ||||| || ||||| ||||| Sbjct 436839 GACACCATCGATAATGTGAAGAGCAAGATCCAGGATAAGGAAGGCATTCCTCCAGATCAG 436780 Query 26889 CAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAA-AC-GTCAGCGACTATA 26946 || | | || | || |||||| || || || |||| | | | || ||| |||||| | Sbjct 436779 CAGCGCTTGATCTTCGCCGGCAAGCAGCTGGAGGATGGTCGCACACTGTC--CGACTACA 436722 Query 26947 ACATTCAAAAAGAATCTACTATCCATCTGGTCCTGAGACTTAGAGGAGG 26995 ||||||| ||||||||||| | ||||| || |||||||| |||| || Sbjct 436721 ACATTCAGAAAGAATCTACACTACATCTTGTTCTGAGACTGCGAGGTGG 436673 Score = 86.0 bits (94), Expect = 6e-12 Identities = 110/152 (72%), Gaps = 0/152 (0%) Strand=Plus/Minus Query 26829 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGATCAA 26888 ||||| ||||| | || || || ||| ||||| || || || || || ||||| Sbjct 437067 GACACTATCGACAATGTAAAGAGCAAAATTCAGGACAAGGAGGGTATTCCCCCGGATCAG 437008 Query 26889 CAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAACGTCAGCGACTATAAC 26948 ||| |||| || | || || |||||||||||||||| ||| | | |||||| ||| Sbjct 437007 CAACGACTTATCTTCGCTGGTAAACAACTCGAAGATGGCCGAACCCTATCCGACTACAAC 436948 Query 26949 ATTCAAAAAGAATCTACTATCCATCTGGTCCT 26980 || || |||||||||||| | || || ||||| Sbjct 436947 ATCCAGAAAGAATCTACTCTTCACCTCGTCCT 436916 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 478662160668800