Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Endocarpon_20pusillum_20[genbank_20GCA_5F000611755.1_202014-04-02] 40 sequences; 37,173,200 total letters Query= NC_007346.1 Length=407339 Score E Sequences producing significant alignments: (Bits) Value seq18 251 2e-61 >seq18 Length=894979 Score = 251 bits (278), Expect = 2e-61 Identities = 1103/1719 (64%), Gaps = 60/1719 (3%) Strand=Plus/Plus Query 363454 CCGCAGCATATGTTAATGCGTGTTGCTATTGGTATCCATTGCCCGGATGTTGATGCCGCG 363513 || || || ||| | ||||||||| || | || |||||| || || | || ||| Sbjct 723755 CCCCAACACATGCTTATGCGTGTTTCTGTGGGCATCCATGGCGACGACATCGAGAGGGCG 723814 Query 363514 ATTGAAACATATAAGCTTCTAAGTGCTC---GTGTATTCACGCACGCCACGCCAACAATG 363570 |||||||| || || || | || | || | ||||| || || | || || || Sbjct 723815 ATTGAAACTTACAACCTCAT--GTCCCAAAAGT-TCTTCACACATGCTTCTCCTACGCTG 723871 Query 363571 TACAATGCTGGAACTCGTAATCCACAGATGTCTTCTTGCTTTCTTCTAAAAATGAAGGAC 363630 | ||| ||||| || | | |||| || | || ||||| || | | ||||| || Sbjct 723872 TTCAACGCTGGTACACCGCAAGGACAGTTGGCGTCCTGCTTCCTCATCGATATGAAAGAG 723931 Query 363631 GATTCCATCGAGGGTATCTTTGACACACTTAAGAATTGTGCTCTTATTTCCAAGAATGCA 363690 || || || || |||| ||||| || || | ||||| | || |||||||| || Sbjct 723932 GACAGTATTGAAGGCATCTACGACACTCTCAAAATCTGTGCCATGATCTCCAAGAACGCT 723991 Query 363691 GGCGGAATTGGTGT-ATCGATCCACAATGTTCGTGC-ACAGAACAGTT---ACATTCGCG 363745 || || ||||| | | || || || |||| || || | ||| ||||| | | Sbjct 723992 GGAGGTATTGGGCTCAACGTTC-ACTGCATTCGCGCTACTG----GTTCCTACATTGGTG 724046 Query 363746 GCACAGGGGGATACTCGAATGGGCTGGTTCCCATGCTTCGTGTGTTTGACAATACTGCGA 363805 ||||| || | || || || || ||| ||| | || || || |||| || || Sbjct 724047 GCACAAATGGGTCATCCAACGGATTGACTCCTATGTTACGCGTCTTCAACAACACCGCTC 724106 Query 363806 GGTACGTCGACCAGGGTGGAGGAAAGCGCAAAGGGGCGTTTGCTATGTATCTCGAGCCTC 363865 | || ||||| || || || ||||| || || || ||||| ||||| ||||| Sbjct 724107 GTTATGTCGATCAAGGCGGCAACAAGCGTCCGGGTGCCTTCGCTATATATCTTGAGCCAT 724166 Query 363866 ATCATGCCGATATTTTTGAGTTTCTTGAGCTCCGGAAAAA-CACGGGAAAAGAGGAATTG 363924 |||||||| | ||||| ||| | || || || || || ||||| || |||||| Sbjct 724167 GGCATGCCGACGTCTTTGACTTTTTGGACCTTCGCAAGAATCACGGCAAG-GAGGAAAGC 724225 Query 363925 CGTGCACGTGATCTGTTCTATGCACTTTGGGTTTCTGACCATTTTATGAAGCGCGTGGAG 363984 || || || ||||| |||||||| || ||| | |||| || ||||| || || ||| Sbjct 724226 CGGGCCCGAGATCTCTTCTATGCTCTCTGGACCCCAGACCTATTCATGAAACGTGTCGAG 724285 Query 363985 GCAGGTAAGAAT------TGGTCACTCTTTTGCCCACACGAATGTCCAGGTCTTTCCGAT 364038 |||||| ||| | ||||| ||||| ||||| |||||| || | ||| Sbjct 724286 ------AAGAATCTTGACTGGACTCTCTTCTGCCCTCACGAGGCTCCAGGCCTGGCAGAT 724339 Query 364039 GTATGGGGTGACGACTATGTTGCTCTATACGAAAAGTATGAATCGGAGGGAAAGGCTCGT 364098 || | |||||||| | | || || ||||| | || || ||| || | ||| Sbjct 724340 GTGTATGGTGACGAGTTCGAGGCACTTTACGAGAGATACGAGAAGGAAGGCCGTGGTCGG 724399 Query 364099 AAGACAATTCCCGCACAGAAGCTATGGTTTGCCATCATGGATTCGCAGATTGAGACAGGA 364158 || | | || ||||| || |||| ||| || | || || |||| ||||| || Sbjct 724400 AAAGCTGTGAAGGCCCAGAAACTCTGGTATGCAATTCTTGAGTCTCAGACAGAGACTGGG 724459 Query 364159 ACACCCTATATGTTGTACAAAGATTCGTGCAACCGCAAGTCCAACCAGCAGCACCTTGGT 364218 || || || ||| | || || ||| |||| ||| ||| ||||||| || ||||||| Sbjct 724460 ACGCCGTACATGCTTTATAAGGATGCGTGTAACAAAAAGAGCAACCAGAAGAACCTTGGG 724519 Query 364219 ACAATTCAGCAGAGC-AACCTATGTACCGAGATTATTGAATACACCGCTCCCGACGAGAC 364277 || || | | || | || || || || |||||| ||||||||| ||| || || ||| Sbjct 724520 ACTATCC-GAAGCTCCAATCTCTGCACTGAGATTGTTGAATACAGCGCACCAGATGAGGT 724578 Query 364278 TGCCGTATGTAACCTTGCGTCGATCGCGCTTCCGGCGTTTGTAAAAGATGGTACTTTTGA 364337 || || || || || || ||| | || ||||| | | ||| | |||| || Sbjct 724579 CGCAGTTTGCAATCTGGCATCGTTGGCTCTTCCCACTTATGTTGATTCTGGTCGAGGCGA 724638 Query 364338 CCACCAGCAT------CTTTATGACGTAACCTA--TCATGCTACTTGCAATCTCGACAAG 364389 || | | || | || || | | || || || |||| || ||| Sbjct 724639 GTACGACTTTGGCCGCCTCCACGAAGTGGTCCAGGTCGTGACAC--GCAACCTGAACAGA 724696 Query 364390 GTTATCGACAAGAATTATTATCCAATTCCTGAAGCCGAGCGTTCTAATATGCGTCATCGC 364449 || ||||| | |||||||| | || || || ||| | || ||| | Sbjct 724697 GTCATCGAACGCAGCCATTATCCAGTCGAGGAGGCACGCCGAAGCAATTTCCGACATAGA 724756 Query 364450 CCGATTGGTCTTGGTGTACAGGGCCTCGCTGACGTTTTTATGATGC--TCAAGATGGCAT 364507 || |||||||||||||| ||||| || || || | ||| | ||| | || ||| Sbjct 724757 CCTATTGGTCTTGGTGTTCAGGGTCTTGCAGATGCCTTTCT--TGCATTGCGTCTGCCAT 724814 Query 364508 TTGATTCGCCTGACGCTCGTGTTCTAAATAAGGAGATCTTTGAAACAATGTATTTTGCCG 364567 | ||||| ||||| || ||| ||||| | |||| |||||||| || ||| || || Sbjct 724815 TCGATTCTCCTGAAGCACGTCAACTAAACACCCAGATATTTGAAACGATCTATCATGGCG 724874 Query 364568 CAATGACTGCTTCGTGTGAT-TTGGCAAAAACCAAGGGAAAGTACTCTACTTATGAGGGG 364626 || | ||||| || ||||| ||| |||| | | || | | || || || ||||| Sbjct 724875 CACTCACTGCCTCCTGTGAGCTTGCCAAAGAGCTCGGAACA-TATGAGACGTACGAGGGT 724933 Query 364627 TCCCCTCTTTCGCAGGGAAAATTCCAGTTTGATCTATGGAATGTCACGCCATCTGTCCGA 364686 || || | ||| | || | | |||| || | ||| ||||| || || | Sbjct 724934 TCTCCAGTCTCGAAAGGCGAGCTTCAGTACGACATGTGGGGCGTCACACCGTCGGATTTG 724993 Query 364687 TGGAACTGGGATACGCT--ACGTTCCAACGTTAAGAAGCATGGTACTCGCAACTCCCTCG 364744 ||| | |||| | ||| | | | || | ||||||||| ||||||||| ||| Sbjct 724994 TGGGATTGGGCCA-GCTTGAAGG-CTGACATCGCCAAGCATGGTGTTCGCAACTCTCTCC 725051 Query 364745 TTACAGCGCCCATGCCCACGGCTTCTACTGCACAGATCCTCGGAAACAACGAGTGCTTCG 364804 || ||||| ||||| || || || || | |||||| | |||||||||||||| |||| Sbjct 725052 TTGTGGCGCCTATGCCGACAGCATCCACCTCCCAGATCTTGGGAAACAACGAGTGTTTCG 725111 Query 364805 AACCGTTTACAAGCAATCTTTATTCACGCCGGGTTCTTTCCGGAGAATTTCCGGTAGTTA 364864 | || | ||| ||| | || || || || || || | |||||||| | ||| || | Sbjct 725112 AGCCATATACCTCGAATATCTACTCTCGTCGCGTCCTGGCTGGAGAATTCCAGGTCGTCA 725171 Query 364865 ATAAGTACCTAGTCAAGGATCTTTCCGACCGCGGGCTGTGGGGTGACAGCATGAAGAACT 364924 || | || | || |||||| || | || || ||| |||| |||||||||| Sbjct 725172 ATCCATGGCTGTTGAAAGATCTTGTTGATCTGGGTCTCTGGTCCGACAACATGAAGAACA 725231 Query 364925 ATATCATCGCCGCTAATGGTTCTGTGCAGAACATTCCAGGATTTCCAGAAGATCTGAAGC 364984 ||||| || | | || || || || || ||||| |||| | ||| | || Sbjct 725232 GAATCATTGCTGATGGCGGCTCAGTCCAAAATATTCCCAACATTCCTGCTGATATCAAAG 725291 Query 364985 CTATTTACAAAACCGTATGGGAAATTTCCATGCGAACTCTCATTGATATGGCGGCCGATC 365044 | | ||||| || || ||||| || | |||||| | | | ||||| || |||| Sbjct 725292 CATTGTACAAGACTGTTTGGGAGATCAGCCAACGAACTATTGTGCAGATGGCTGCTGATC 725351 Query 365045 GCGGTGCTTTTATCTGTCAGAGCCAGTCGTTTAACGTATTCATGACTC----AGCCAACC 365100 | ||||| || || || |||||| | ||| ||||||| ||| |||| ||| Sbjct 725352 GGGGTGCATTCATTGACCAATCCCAGTC-TCTAA-ATATTCAT--CTCAAGGAGCCTACC 725407 Query 365101 TCCGCCAAGCTTACATCCATGCATTTCTACGGGTGGAAA 365139 | |||| | || ||||||||||| ||||||||| Sbjct 725408 ATGGGCAAGATCACCTCCATGCATTTTGCTGGGTGGAAA 725446 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1303352932031280