Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Endocarpon_20pusillum_20[genbank_20GCA_5F000611755.1_202014-04-02] 40 sequences; 37,173,200 total letters Query= NC_007383.1 Length=134394 Score E Sequences producing significant alignments: (Bits) Value seq9 102 7e-17 >seq9 Length=1292822 Score = 102 bits (112), Expect = 7e-17 Identities = 162/229 (71%), Gaps = 4/229 (2%) Strand=Plus/Minus Query 23991 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAAC 24050 |||||| | || || || ||||| || || || | || ||| | ||||| || | | Sbjct 436899 ATGCAAATCTTCGTCAAGACATTGACCGGCAAGACCATCACCTTAGAAGTTGAATCGTCC 436840 Query 24051 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCAA 24110 ||||||||||| | || || ||||| || || |||||||| ||||| ||||| Sbjct 436839 GACACCATCGATAATGTGAAGAGCAAGATCCAGGATAAGGAAGGCATTCCTCCAGATCAG 436780 Query 24111 CAGAGACTGATTTACGGCGGCAAGCAACTCGAAGAT-GACAGAAAC-GTCAGCGATTATA 24168 ||| | |||| | || ||||||||| || || ||| | | | || ||| ||| || | Sbjct 436779 CAGCGCTTGATCTTCGCCGGCAAGCAGCTGGAGGATGGTCGCACACTGTC--CGACTACA 436722 Query 24169 ACATTCAAAAAGAATCTACAATTCATTTAGTGTTAAGATTGAGAGGAGG 24217 ||||||| |||||||||||| | ||| | || | ||| || |||| || Sbjct 436721 ACATTCAGAAAGAATCTACACTACATCTTGTTCTGAGACTGCGAGGTGG 436673 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 429935790406200