Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Endocarpon_20pusillum_20[genbank_20GCA_5F000611755.1_202014-04-02] 40 sequences; 37,173,200 total letters Query= NC_009011.2 Length=131331 Score E Sequences producing significant alignments: (Bits) Value seq9 122 7e-23 >seq9 Length=1292822 Score = 122 bits (134), Expect = 7e-23 Identities = 165/230 (72%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 114153 ATACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCG 114212 || || || || ||||||| ||| | ||||| ||||||||||| ||||||||||| ||| Sbjct 436670 ATGCCACCTCGCAGTCTCAGAACAAGATGTAGTGTAGATTCTTTCTGAATGTTGTAGTCG 436729 Query 114213 CTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGA 114272 || || ||| ||| || || || || || ||| |||| | ||||| || || ||| Sbjct 436730 GACAGTGTGCGACCATCCTCCAGCTGCTTGCCGGCGAAGATCAAGCGCTGCTGATCTGGA 436789 Query 114273 GGAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCG 114332 ||||||||||| || || ||||| || | | || | |||||||| ||||| Sbjct 436790 GGAATGCCTTCCTTATCCTGGATCTTGCTCTTCACATTATCGATGGTGTCGGACGATTCA 436849 Query 114333 ACGTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 114382 || || | ||| | || |||||||||| || || || || || ||||| Sbjct 436850 ACTTCTAAGGTGATGGTCTTGCCGGTCAATGTCTTGACGAAGATTTGCAT 436899 Score = 96.9 bits (106), Expect = 3e-15 Identities = 152/218 (70%), Gaps = 0/218 (0%) Strand=Plus/Plus Query 114153 ATACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCG 114212 ||||| ||||| || | | || | || | ||||||||||| || |||||||| ||| Sbjct 436898 ATACCACCACGAAGACGGAGGACGAGGTGAAGAGTAGATTCTTTCTGGATGTTGTAGTCG 436957 Query 114213 CTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGA 114272 | || || |||||| ||||||||||||||| |||| || || || || ||||| Sbjct 436958 GATAGGGTTCGGCCATCTTCGAGTTGTTTACCAGCGAAGATAAGTCGTTGCTGATCCGGG 437017 Query 114273 GGAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCG 114332 ||||| || || ||||| ||| || |||| | || | ||||| | || ||| Sbjct 437018 GGAATACCCTCCTTGTCCTGAATTTTGCTCTTTACATTGTCGATAGTGTCAGACGACTCG 437077 Query 114333 ACGTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTAC 114370 || |||| || | || || || |||||||| || || Sbjct 437078 ACCTCCAGAGTGATGGTCTTCCCAGTCAGAGTCTTGAC 437115 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 420134195184480