Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Endocarpon_20pusillum_20[genbank_20GCA_5F000611755.1_202014-04-02] 40 sequences; 37,173,200 total letters Query= NC_010191.2 Length=186713 Score E Sequences producing significant alignments: (Bits) Value seq18 219 5e-52 seq9 102 1e-16 seq33 82.4 9e-11 >seq18 Length=894979 Score = 219 bits (242), Expect = 5e-52 Identities = 1137/1781 (64%), Gaps = 51/1781 (3%) Strand=Plus/Minus Query 113565 TGAACTGAATGGGTCTCGCCTTGGCCTTTGATCGGAGGTAGTACATCCCCGTCTTGAGCC 113624 ||||||| |||||| | |||| | | || ||||||||||| |||||||| | | Sbjct 725510 TGAACTGGATGGGTGCAGAGGCGGCCATGGTACGCAGGTAGTACATTCCCGTCTTCAAGC 725451 Query 113625 CCTGCTTCCAGGCATACATATGCATCGAGGACAACTTGGAGAGTGTTGGA--CTTTCCAT 113682 | | ||||| || | |||||| |||| | |||| | || || ||| || Sbjct 725450 CAAGTTTCCACCCAGCAAAATGCATGGAGGTGATCTTGCCCATGGTAGGCTCCTTGAGAT 725391 Query 113683 GAAGAGGTTCATACTTTGGGATTGATCGATGAAGCGTCCACGATCCGCCGCCATATCAAT 113742 ||| | | | ||| ||||||| || ||||| || ||||| || ||||| | | Sbjct 725390 GAATATTTAGAGACT--GGGATTGGTCAATGAATGCACCCCGATCAGCAGCCATCTGCA- 725334 Query 113743 CACATCCTTCATCT--TGATTTCCCACACAGTTCTGTAGAGGTTCTTAATATCATCTGGG 113800 || || ||| | |||| ||||| ||||| |||| | || |||||| | || Sbjct 725333 CA-ATAGTTCGTTGGCTGATCTCCCAAACAGTCTTGTACAATGCTTTGATATCAGCAGGA 725275 Query 113801 ATATCCACGATATTTTGGATGGAGCCACCC---GCCTTGACCATGAGATCCTTCATATCC 113857 || | |||||||||| ||||| || || ||| || | |||||| | Sbjct 725274 ATGTTGGGAATATTTTGGACTGAGCCGCCATCAGCAATGATTCTG---TTCTTCATGTTG 725218 Query 113858 TTTGACCAGAGACCAATCTTTTTGAGATCCTCCACGAG--ATGCTTATTGACAACAACAA 113915 | ||||||||||| | | ||||| | || || ||| |||||| || | Sbjct 725217 TCGGACCAGAGACCCAGATCAACAAGATCTTTCAACAGCCATGG--ATTGACGACCTGGA 725160 Query 113916 ACTCACCCGCGAGGGTGCGTCTCAGA-TAGATATTGGTCGTGTATGGCTCAAAGCACTCA 113974 | || || || ||| ||| | ||| |||||||| | || |||||||| || ||||| Sbjct 725159 ATTCTCCAGCCAGGACGCGACG-AGAGTAGATATTCGAGGTATATGGCTCGAAACACTCG 725101 Query 113975 TTGTTACCCAAGATTTGGGCGGTGGAGGCTGTGGGCATGGGTGCCATGAGAAGGCTGTTA 114034 ||||| |||||||| |||| |||||| ||||| ||||| || |||| || || ||| Sbjct 725100 TTGTTTCCCAAGATCTGGGAGGTGGATGCTGTCGGCATAGGCGCCACAAGGAGAGAGTTG 725041 Query 114035 CGGAGACCCTTTTCCCTAATGCGTTCCTTGAGGGCGTCCCAGTCGTAGT--TGAG-CTTT 114091 || | ||| | | ||| |||| | | | |||| || | | | | | Sbjct 725040 CGAACACCATGCTTGGCGATGTCAGCCTTCAAGCTGGCCCAATCCCACAAATCCGACGGT 724981 Query 114092 GTCTCCCCCTGCCACATATCAAACTGGAGGATACCTTGGGAGGCTGGCGATCCCTCAAAT 114151 || | ||| ||||| || |||| || |||| ||| |||| || ||||| | Sbjct 724980 GTGACGCCC---CACATGTCGTACTGAAGCTCGCCTTTCGAGACTGGAGAACCCTCGTAC 724924 Query 114152 GTCTCGTATGGGCCCTCAACCTCCGCCAATTCGGAGCTCGCCTCGAGGGCTGCGTGATAC 114211 ||||| |||| || | | || | || || || ||| || | ||||| Sbjct 724923 GTCTCATATGTTCCGAGCTCTTTGGCAAGCTCACAGGAGGCAGTGAGTGCGCCATGATAG 724864 Query 114212 ATTGTCTCAAAAATGCGAGCATTCA-TTGCCTTGGCCTCGTCGGAATCAAACGCGAGTCG 114270 || || ||||| || | | || | ||| | || | || ||||| || | || || Sbjct 724863 ATCGTTTCAAATATCTGGGTGTTTAGTTGACGTG-CTTCAGGAGAATCGAATGGCAGACG 724805 Query 114271 GCACAAAATAAATACATCCGCGAGACCTTGGACACCGAGGCCAATTGGGCGATGTCTCAT 114330 | || ||| |||| || ||||| || ||||| || ||||| || | ||||| | Sbjct 724804 CAATGCAAGAAAGGCATCTGCAAGACCCTGAACACCAAGACCAATAGGTCTATGTCGGAA 724745 Query 114331 ATTAGACTTT--CGAGCGGTCTCCACGGGATAAAAATTCCTATCGATAACCCTATTTAGA 114388 ||| ||| || || ||| || |||||| | | ||||| || || || || Sbjct 724744 ATTG--CTTCGGCGTGCCTCCTCGACTGGATAATGGCTGCGTTCGATGACTCTGTTCAGG 724687 Query 114389 TTTTTGGTGACAACCTTTGTGATTTCATGAAGCTTTTCGTAATCAAAACTGCGAGTCT-- 114446 || || || |||| | ||| || || | | || | || || || Sbjct 724686 TTGCGTGTCACGACCTGGACCACTTCGTGGAGGCGGCCAAAGTCGTA-CT-CGCCTCGAC 724629 Query 114447 CTTCATTGACATACTTAGGAAGGGCGATTGACGCCAGATTACACACAGAGGTCTCATCCT 114506 | || ||||| | ||||| || | || |||||||| || || | | |||||| Sbjct 724628 CAGAATCAACATAAGTGGGAAGAGCCAACGATGCCAGATTGCAAACTGCGACCTCATCTG 724569 Query 114507 TATCAGTGTACTCTATAATTTCCGTACACAAATTTGAACTCTTAATGGTGCCCAAGTTCT 114566 | |||| || | ||| || || || | ||| || || || || || | ||||| Sbjct 724568 GTGCGCTGTATTCAACAATCTCAGTGCAGAGATTGGAGCTTCGGATAGTCCCAAGGTTCT 724509 Query 114567 TTTGATTTGACTTTGTGTTACACGCATCCTTGTAAAGCATGTATGGCGTCCCCGTCTCCG 114626 | || || |||| |||||||||||||||| ||||||||||| |||||||| ||||| | Sbjct 724508 TCTGGTTGCTCTTTTTGTTACACGCATCCTTATAAAGCATGTACGGCGTCCCAGTCTCTG 724449 Query 114627 TTTGGGACTTGAGAATAGCCTTCCAGACATCGGCGGCTGGCACAG--TGGCGTTGGCTCG 114684 | || |||| ||||| || | ||||| | ||| ||||| | || | || Sbjct 724448 TCTGAGACTCAAGAATTGCATACCAGAGTTTCTGGGCCTTCACAGCTTTCCGAC--CACG 724391 Query 114685 CCCCTCCTCCTCGTACTTTGTGTAGAGGGCTTCAAACTCTTCACCCACGGCCTCTGAGAG 114744 || |||| |||||| | ||| || || || ||||| ||||| | |||| || Sbjct 724390 GCCTTCCTTCTCGTATCTCTCGTAAAGTGCCTCGAACTCGTCACCATACACATCTGCCAG 724331 Query 114745 CCCTGGTGCCTTATCTGGGCAGAAGAGAGACCATTGACCACCCTCCTCAACACGCTTCAT 114804 ||||| |||| | ||||||||||||| ||| | | | || ||| ||||| ||||| Sbjct 724330 GCCTGGAGCCTCGTGAGGGCAGAAGAGAGTCCAGTCAAGATTCTTCTCGACACGTTTCAT 724271 Query 114805 GAAGAGGTCTGGGATCCAGAGAGCTGAGAAGAGATCCCGACAGCGAGCTTCTTCATCCCC 114864 ||| ||||||||| |||||||||| |||||||||| || || ||| || | || Sbjct 724270 GAATAGGTCTGGGGTCCAGAGAGCATAGAAGAGATCTCGGGCCCGGCTTTCCTCCTTGCC 724211 Query 114865 CTGATTGAGACGCAACTCCAAAAAGTCCATGATATCCGCGTGCCACGGTTCCAGGTACAC 114924 ||||| || | ||||||||||| | || || || ||||| || || || || | Sbjct 724210 GTGATTCTTGCGAAGGTCCAAAAAGTCAAAGACGTCGGCATGCCATGGCTCAAGATATAT 724151 Query 114925 CGCGATTGACCCCTTACG---ACGACCAGCCTGGTTTACATACCTCGCTGTGGCATTAAA 114981 |||| | ||| ||| || | || | ||||| | || ||| || || Sbjct 724150 AGCGAAGGCACCCGGACGCTTGTTGCCGCCTTGATCGACATAACGAGCGGTGTTGTTGAA 724091 Query 114982 TACGCGAAGCATTGGAATGATACCATCAGATTGGCCATTTGTCCCCCGAATACGAGACTT 115041 ||||| | ||| ||| | | || | ||| |||||||| || | ||| || Sbjct 724090 GACGCGTAACATAGGAGTCAATCCGTTGGATGACCCATTTGTGCCACCAATGTAGGAACC 724031 Query 115042 ATTGGCTCTGACATCA-TGGATGTGCATACCAATACCCCCTGCCCACTTTGAGATTTGCG 115100 | | || | || || || | || | |||||||| || || ||| ||||| | Sbjct 724030 AGTAGCGC-GAATGCAGTGAACGTTGAGCCCAATACCTCCAGCGTTCTTGGAGATCATGG 723972 Query 115101 CGCACTCCGTGAGACTGCCGTAGATCCCGTCGATCGAGTCACCCTTATTTGCGATAAGGA 115160 | || ||||| || ||||||| || || || ||| | || | |||| |||| Sbjct 723971 CACAGATTTTGAGAGTGTCGTAGATGCCTTCAATACTGTCCTCTTTCATATCGATGAGGA 723912 Query 115161 AGCAGCTCGACATTTGTGGCCTT--GGTGTACCAGCGTTGAAGAGGGTTGGTGTCGCGTG 115218 ||||| || || ||| |||| ||||||||||||||||| || || || | || || Sbjct 723911 AGCAGGACGCCAACTGT--CCTTGCGGTGTACCAGCGTTGAACAGCGTAGGAGAAGCATG 723854 Query 115219 GATGAACATACCTTGGGACATCTTATCGTAGGTCTCCA-AGACGGCGGGAATGTCTTCCC 115277 |||| | ||||||||| | ||| || || | | | | | ||||| || | Sbjct 723853 TGTGAAGAACTTTTGGGACATGAGGTTGTAAGTTTCAATCGCCCTCTCG-ATGTCGTCGC 723795 Query 115278 CGTGAATACCGATCGAGACCCGCATAAACATGTATTGGGGT 115318 | || || || | || || ||||||| ||||| ||||||| Sbjct 723794 CATGGATGCCCACAGAAACACGCATAAGCATGTGTTGGGGT 723754 >seq9 Length=1292822 Score = 102 bits (112), Expect = 1e-16 Identities = 118/159 (74%), Gaps = 0/159 (0%) Strand=Plus/Minus Query 126046 GGCAAACTCTTGGTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGTCC 126105 |||||| ||| || |||||||||||||| ||||| || |||||||||||| || || Sbjct 487041 GGCAAAATCTGTATGCAGACCCTCGTCACGAGAGATCAGCTCATTCGAGAAGGTGAGACC 486982 Query 126106 TGGCATGAGACCCCGCTTCTTCAACCAGAAAATCGCACAAAATGAACCCGAGAAGAAGAT 126165 |||||| || || |||||||| | ||| || | | || || || || |||||||| Sbjct 486981 TGGCATCAGGCCACGCTTCTTGAGCCAAAAGACAGATGCGAAGGAGCCAGAAAAGAAGAT 486922 Query 126166 TCCCTCCACACACGCGAACGCAAAGAGACGCTCAGCAAA 126204 |||||| || ||||| |||| || || | |||||| Sbjct 486921 TCCCTCGACGGCTGCGAAGGCAACAAGGCGTTGAGCAAA 486883 >seq33 Length=225063 Score = 82.4 bits (90), Expect = 9e-11 Identities = 163/237 (69%), Gaps = 6/237 (3%) Strand=Plus/Minus Query 10957 CTTACCGACGGCGTCAATTTCATCGATGAAAACGATACACGGTTGATTTTCACGGGCAAC 11016 ||| || | ||| ||||| |||||||| || | |||||| || ||| | || ||| Sbjct 181736 CTTTCCAATGGCATCAATCTCATCGATAAATATGATACAAGGGGTATTCTTGCGAGCA-- 181679 Query 11017 TTC--AAAGATATCTCGGACTCTCTTGGCACCGACACCCACAAACATTTCCACAAAATTG 11074 ||| ||| | |||||| |||||| | || || || ||||||||||| ||||| | Sbjct 181678 TTCGAAAACAGATCTCGCACTCTCGACGGCCCAACCCCAACAAACATTTCGACAAACTCC 181619 Query 11075 GCGGCGGA-ACATTGGATGAAGGGGACGTTGGATTCACCCGCGATGGCTCGGGCGAGGAG 11133 | | || || | | ||||| || ||||||||| || | ||| ||| ||||| Sbjct 181618 GAACCCGAGACCGAGTA-AAAGGGTACTCCGGATTCACCTGCCGTTGCTTTGGCAAGGAG 181560 Query 11134 GGTCTTCCCCGTCCCAGGTTTCCCTGCGAGAAGGGCACCACGTGGGATCCTGGCACC 11190 ||||| || || |||||| |||| | | |||||||| ||||| |||| || Sbjct 181559 TGTCTTACCAGTACCAGGTGGGCCTGATAAGATCGCACCACGAGGGATTTTGGCGCC 181503 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 597353301323200