Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Endocarpon_20pusillum_20[genbank_20GCA_5F000611755.1_202014-04-02] 40 sequences; 37,173,200 total letters Query= NC_011183.1 Length=154641 Score E Sequences producing significant alignments: (Bits) Value seq18 179 4e-40 >seq18 Length=894979 Score = 179 bits (198), Expect = 4e-40 Identities = 490/740 (66%), Gaps = 14/740 (2%) Strand=Plus/Plus Query 93898 CCGACCCTGTTCAACGCGGGGACCCCGGTGCCACAGATGTCTTCGTGTTTCCTGATGACG 93957 || || ||||||||||| || || ||| |||| || | || || ||||| || Sbjct 723863 CCTACGCTGTTCAACGCTGGTACACCGCAAGGACAGTTGGCGTCCTGCTTCCTCATCGAT 723922 Query 93958 AACAAGGCCGACTCCATCTCCGGAATTTTCGACAGCCTCAAGGACTGTGCGACCATCTCA 94017 | || | ||| || || || | ||||| ||||| |||||| | ||||| Sbjct 723923 ATGAAAGAGGACAGTATTGAAGGCATCTACGACACTCTCAAAATCTGTGCCATGATCTCC 723982 Query 94018 AAATACGCGGGGGGAATCGGGATCAGTGTCCACGACGTACGTGCCAGGGGTTCCTACATC 94077 || |||| || || || ||| ||| || ||| | | || || | ||||||||||| Sbjct 723983 AAGAACGCTGGAGGTATTGGGCTCAACGTTCACTGCATTCGCGCTACTGGTTCCTACATT 724042 Query 94078 CGCGGTACCAATGGCACCTCCAACGGCCTCGTCCCTATGCTCCGGGTCTTCAACAACGCG 94137 | || || ||||| | |||||||| | |||||| | || |||||||||||| | Sbjct 724043 GGTGGCACAAATGGGTCATCCAACGGATTGACTCCTATGTTACGCGTCTTCAACAACACC 724102 Query 94138 GCGCGCTACGTGGACCAGGGTGGTGGGAGGAGGAAGGGTTCTTTCGCGGTCTATCTCGAG 94197 || || || || || || || || | | | |||| | ||||| | ||||| ||| Sbjct 724103 GCTCGTTATGTCGATCAAGGCGGCAACAAGCGTCCGGGTGCCTTCGCTATATATCTTGAG 724162 Query 94198 CCCTGGCACGCGGACGTGCAGGCTTTCATCGACCTGCGAAAGAACCACGGCAACGATCTG 94257 || ||||| || ||||| | || | ||||| || ||||| |||||||| || | Sbjct 724163 CCATGGCATGCCGACGTCTTTGACTTTTTGGACCTTCGCAAGAATCACGGCAAGGA---G 724219 Query 94258 GAGA---GGGCCAGAGACCTCTTCTACGCTCTCTGGGTGCCAGACCTTTTTATGAAACGC 94314 || | ||||| |||| |||||||| ||||||||| |||||||| || |||||||| Sbjct 724220 GAAAGCCGGGCCCGAGATCTCTTCTATGCTCTCTGGACCCCAGACCTATTCATGAAACGT 724279 Query 94315 GTCGAGAAAAACTCCGCCTGGAGTCTTTTTTGTCCCAATGAATGTCCCGGACTGTCCGAC 94374 |||||||| || | ||||| ||| || || || | || ||| || ||| | || Sbjct 724280 GTCGAGAAGAATCTTGACTGGACTCTCTTCTGCCCTCACGAGGCTCCAGGCCTGGCAGAT 724339 Query 94375 GTTTGTGGATCGCGTTTTGAAG--ACTTGTATGCTCGTTACGA-ATCGCAGGGCAAGGCC 94431 || | ||| | || || || |||| || | | ||||| | | ||| | || | Sbjct 724340 GTGTATGG-TGACGAGTTCGAGGCACTT-TACGAGAGATACGAGAAGGAAGGCCGTGGTC 724397 Query 94432 AGGAAGGTTATGGATGCTAGGAAGCTGTGGGATCAGATCGTGGACGTACAGGTGGAGACG 94491 |||| | | || | || ||| || ||| || || | || ||| ||||| Sbjct 724398 -GGAAAGCTGTGAAGGCCCAGAAACTCTGGTATGCAATTCTTGAGTCTCAGACAGAGACT 724456 Query 94492 GGTACGCCCTACATCTTGTTCAAGGACTC-TGTCAACGCCAAGTCCAACCAGCAGCACCT 94550 || ||||| ||||| | | ||||| | ||| ||| ||| ||||||| || |||| Sbjct 724457 GGGACGCCGTACATGCTTTATAAGGATGCGTGT-AACAAAAAGAGCAACCAGAAGAACCT 724515 Query 94551 CGGGGTGATCAAGAGCTCGAATCTGTGCACCGAGATTGTCGAGTATACTTCTCCGGACGA 94610 ||| ||| ||||| ||||| ||||| |||||||| || || | | || || || Sbjct 724516 TGGGACTATCCGAAGCTCCAATCTCTGCACTGAGATTGTTGAATACAGCGCACCAGATGA 724575 Query 94611 GATTGCTGTGTGTAACCTGG 94630 | | || || || || |||| Sbjct 724576 GGTCGCAGTTTGCAATCTGG 724595 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 494722952638400