Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Endocarpon_20pusillum_20[genbank_20GCA_5F000611755.1_202014-04-02] 40 sequences; 37,173,200 total letters Query= NC_013288.1 Length=191761 Score E Sequences producing significant alignments: (Bits) Value seq18 196 6e-45 seq9 105 8e-18 >seq18 Length=894979 Score = 196 bits (216), Expect = 6e-45 Identities = 1133/1783 (64%), Gaps = 55/1783 (3%) Strand=Plus/Minus Query 115526 TGAACTGAATGGGTCTCGCCTTGGCCTTTGATCGGAGGTAGTACATCCCCGTCTTGAGCC 115585 ||||||| |||||| | |||| | | || ||||||||||| |||||||| | | Sbjct 725510 TGAACTGGATGGGTGCAGAGGCGGCCATGGTACGCAGGTAGTACATTCCCGTCTTCAAGC 725451 Query 115586 CCTGCTTCCAGGCATACATATGCATTGAGGACAACTTGGAGAGTGTTGGA--CTTTCCAT 115643 | | ||||| || | |||||| |||| | |||| | || || ||| || Sbjct 725450 CAAGTTTCCACCCAGCAAAATGCATGGAGGTGATCTTGCCCATGGTAGGCTCCTTGAGAT 725391 Query 115644 GAAGAGGTTCATACTTTGGGATTGATCGATGAAGCGTCCCCGATCCGCCGCCATATCAAT 115703 ||| | | | ||| ||||||| || ||||| |||||||| || ||||| | | Sbjct 725390 GAATATTTAGAGACT--GGGATTGGTCAATGAATGCACCCCGATCAGCAGCCATCTGCA- 725334 Query 115704 CACATCCTTCATCT--TGATTTCCCACACAGTTCTGTAGAGGTTCTTAATATCATCTGGG 115761 || || ||| | |||| ||||| ||||| |||| | || |||||| | || Sbjct 725333 CA-ATAGTTCGTTGGCTGATCTCCCAAACAGTCTTGTACAATGCTTTGATATCAGCAGGA 725275 Query 115762 ATATCCACGATATTTTGGATAGAGCCACCT---GCCTTGACCATGAGATCCTTCATATCC 115818 || | |||||||||| ||||| || || ||| || | |||||| | Sbjct 725274 ATGTTGGGAATATTTTGGACTGAGCCGCCATCAGCAATGATTCTG---TTCTTCATGTTG 725218 Query 115819 TTTGACCAGAGACCAATCTTCTTGAGATCCTCCACGAGGTGCTTATTGACAACAACAAAC 115878 | ||||||||||| | | ||||| | || || |||||| || || Sbjct 725217 TCGGACCAGAGACCCAGATCAACAAGATCTTTCAACAGCCATGGATTGACGACCTGGAAT 725158 Query 115879 TCACCCGCGAGGGTGCGTCTCAGA-TAGATGTTGGTCGTGTATGGCTCAAAGCACTCATT 115937 || || || ||| ||| | ||| ||||| || | || |||||||| || ||||| || Sbjct 725157 TCTCCAGCCAGGACGCGACG-AGAGTAGATATTCGAGGTATATGGCTCGAAACACTCGTT 725099 Query 115938 GTTACCCAAGATTTGGGCTGTGGAGGCTGTGGGCATGGGTGCCATGAGAAGGCTGTTGCG 115997 ||| |||||||| |||| ||||| ||||| ||||| || |||| || || |||||| Sbjct 725098 GTTTCCCAAGATCTGGGAGGTGGATGCTGTCGGCATAGGCGCCACAAGGAGAGAGTTGCG 725039 Query 115998 GAGACCCACCCCCCTAATGCGTTCCTTGAGGGCGTCCCAGTCGTAGT--TGAG-CTTTGT 116054 | ||| | ||| |||| | | | |||| || | | | | ||| Sbjct 725038 AACACCATGCTTGGCGATGTCAGCCTTCAAGCTGGCCCAATCCCACAAATCCGACGGTGT 724979 Query 116055 CTCCCCCTCCCACATATCAAACTGGAGGATACCTTGGGACGCTGGCGATCCCTCAAATGT 116114 | ||| ||||| || |||| || |||| || |||| || ||||| | || Sbjct 724978 GACGCCC---CACATGTCGTACTGAAGCTCGCCTTTCGAGACTGGAGAACCCTCGTACGT 724922 Query 116115 CTCATATGGGCCCTCAACCTCCGCCAATTCGGAGCTCGCCTCGAGGGCTGCGTGATACAT 116174 |||||||| || | | || | || || || ||| || | ||||| || Sbjct 724921 CTCATATGTTCCGAGCTCTTTGGCAAGCTCACAGGAGGCAGTGAGTGCGCCATGATAGAT 724862 Query 116175 TGTCTCAAAAATGCGAGCATTCA-TTGCCTTGGCCTCGTCGGAATCAAACGCGAGACGGC 116233 || ||||| || | | || | ||| | || | || ||||| || | ||||| Sbjct 724861 CGTTTCAAATATCTGGGTGTTTAGTTGACGTG-CTTCAGGAGAATCGAATGGCAGACGCA 724803 Query 116234 ACAAAATAAATACATCCGCGAGACCTTGGACACCGAGGCCAATTGGGCGATGTCTCATAT 116293 | || ||| |||| || ||||| || ||||| || ||||| || | ||||| | || Sbjct 724802 ATGCAAGAAAGGCATCTGCAAGACCCTGAACACCAAGACCAATAGGTCTATGTCGGAAAT 724743 Query 116294 TAGACTTT--CGAGCGGTCTCCACGGGATAAAAATTCCTATCGATAACCCTATTTAGATT 116351 | ||| || || ||| || |||||| | | ||||| || || || || || Sbjct 724742 TG--CTTCGGCGTGCCTCCTCGACTGGATAATGGCTGCGTTCGATGACTCTGTTCAGGTT 724685 Query 116352 TTTGGTGACAACCTTTGTGATTTCATGAAGCTTTTCGTAATCAAAACTGCGAGTCT--CT 116409 || || |||| | ||| || || | | || | || || || | Sbjct 724684 GCGTGTCACGACCTGGACCACTTCGTGGAGGCGGCCAAAGTCGTA-CT-CGCCTCGACCA 724627 Query 116410 TCATTGACATACTTAGGAAGGGCGATTGACGCCAGATTACACACAGAGGTCTCATCCTTA 116469 || ||||| | ||||| || | || |||||||| || || | | |||||| Sbjct 724626 GAATCAACATAAGTGGGAAGAGCCAACGATGCCAGATTGCAAACTGCGACCTCATCTGGT 724567 Query 116470 TCAGTGTACTCTATAATTTCCGTACACAAATTTGAACTCTTAATGGTGCCCAAGTTCTTT 116529 | |||| || | ||| || || || | ||| || || || || || | |||||| Sbjct 724566 GCGCTGTATTCAACAATCTCAGTGCAGAGATTGGAGCTTCGGATAGTCCCAAGGTTCTTC 724507 Query 116530 TGATTTGACTTTGTGTTACACGCATCCTTGTAGAGCATATATGGCGTCCCCGTCTCCGTT 116589 || || |||| |||||||||||||||| || ||||| || |||||||| ||||| || Sbjct 724506 TGGTTGCTCTTTTTGTTACACGCATCCTTATAAAGCATGTACGGCGTCCCAGTCTCTGTC 724447 Query 116590 TGGGACTTGAGAATAGCCTTCCATACATCGGCGGCTGGCACAG--TGGCGTTGGCTCGCC 116647 || |||| ||||| || | ||| | | ||| ||||| | || | || | Sbjct 724446 TGAGACTCAAGAATTGCATACCAGAGTTTCTGGGCCTTCACAGCTTTCCGAC--CACGGC 724389 Query 116648 CCTCCTCCTCGTACTTTGTGTAGAGGGCCTCAAACTCTTCACCC-ACAGCCTCTGAGAGC 116706 | |||| |||||| | ||| || ||||| ||||| ||||| ||| | |||| || Sbjct 724388 CTTCCTTCTCGTATCTCTCGTAAAGTGCCTCGAACTCGTCACCATACA-CATCTGCCAGG 724330 Query 116707 CCTGGTGCCTTATCTGGACAGAAGAGAGACCATTGACCACCCTCCTCAACCCGCTTCATG 116766 ||||| |||| | || |||||||||| ||| | | | || ||| || || |||||| Sbjct 724329 CCTGGAGCCTCGTGAGGGCAGAAGAGAGTCCAGTCAAGATTCTTCTCGACACGTTTCATG 724270 Query 116767 AAGAGGTCTGGGATCCAGAGCGCCGAGAAGAGATCCCGACAGCGAGCTTCTTCATCCCCC 116826 || ||||||||| ||||||| || |||||||||| || || ||| || | || Sbjct 724269 AATAGGTCTGGGGTCCAGAGAGCATAGAAGAGATCTCGGGCCCGGCTTTCCTCCTTGCCG 724210 Query 116827 TGATTGAGACGCAACTCCAAAAAGTCCATGATATCCGCGTGCCACGGTTCCAGGTACACC 116886 ||||| || | ||||||||||| | || || || ||||| || || || || | Sbjct 724209 TGATTCTTGCGAAGGTCCAAAAAGTCAAAGACGTCGGCATGCCATGGCTCAAGATATATA 724150 Query 116887 GCGATTG-ACCC-----CTTGCGACGACCAGCCTGGTTTACATACCTCGCCGTTGCGTTA 116940 |||| | |||| |||| || | || | ||||| | || || ||| Sbjct 724149 GCGAAGGCACCCGGACGCTTG---TTGCCGCCTTGATCGACATAACGAGCGGTGTTGTTG 724093 Query 116941 AATACGCGAAGCATTGGAATGATACCATCAGATTGGCCATTTGTCCCCCGAA--TACGAG 116998 || ||||| | ||| ||| | | || | ||| |||||||| || | || || || Sbjct 724092 AAGACGCGTAACATAGGAGTCAATCCGTTGGATGACCCATTTGTGCCACCAATGTAGGA- 724034 Query 116999 ACTTGTTGGCTCTGACATCGTGGATGTGCATACCAATACCCCCTGCCCACTTTGAGATTT 117058 || | | || | | ||| | || | |||||||| || || ||| ||||| Sbjct 724033 ACCAG-TAGCGCGAATGCAGTGAACGTTGAGCCCAATACCTCCAGCGTTCTTGGAGATCA 723975 Query 117059 GTGCGCACTCCGTGAGACTGCCGTAGATCCCATCGATCGAGTCACCCTTATTTGCGATGA 117118 || || ||||| || ||||||| || || || ||| | || | |||||| Sbjct 723974 TGGCACAGATTTTGAGAGTGTCGTAGATGCCTTCAATACTGTCCTCTTTCATATCGATGA 723915 Query 117119 GGAAGCAGCTCGACATTTGTGGCCTT--GGTGTACCAGCGTTGAAGAGGGTTGGTGTCGC 117176 |||||||| || || ||| |||| ||||||||||||||||| || || || | || Sbjct 723914 GGAAGCAGGACGCCAACTGT--CCTTGCGGTGTACCAGCGTTGAACAGCGTAGGAGAAGC 723857 Query 117177 GTGGATGAACATACCTTGGGACATCTTATCGTAGGTCTCCAAGACAGAGGGAATGTCTTC 117236 || |||| | ||||||||| | ||| || || | | ||||| || Sbjct 723856 ATGTGTGAAGAACTTTTGGGACATGAGGTTGTAAGTTTCAATCGCCCTCTCGATGTCGTC 723797 Query 117237 CCCGTGAATACCGATTGAGACCCGCATAAACATGTATTGGGGT 117279 || || || || | || || ||||||| ||||| ||||||| Sbjct 723796 GCCATGGATGCCCACAGAAACACGCATAAGCATGTGTTGGGGT 723754 >seq9 Length=1292822 Score = 105 bits (116), Expect = 8e-18 Identities = 118/158 (75%), Gaps = 0/158 (0%) Strand=Plus/Minus Query 127520 GCAAACTCTTGGTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGACCT 127579 ||||| ||| || |||||||||||||| ||||| || |||||||||||| |||||| Sbjct 487040 GCAAAATCTGTATGCAGACCCTCGTCACGAGAGATCAGCTCATTCGAGAAGGTGAGACCT 486981 Query 127580 GGCATGAGACCCCGCTTCTTCAACCAGAAAATCGCACAAAATGAGCCAGAGAAGAAGATC 127639 ||||| || || |||||||| | ||| || | | || |||||||| |||||||| Sbjct 486980 GGCATCAGGCCACGCTTCTTGAGCCAAAAGACAGATGCGAAGGAGCCAGAAAAGAAGATT 486921 Query 127640 CCCTCCACACACGCGAACGCAAATAGACGCTCGGCAAA 127677 ||||| || ||||| |||| || || | ||||| Sbjct 486920 CCCTCGACGGCTGCGAAGGCAACAAGGCGTTGAGCAAA 486883 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 613506893246400