Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Endocarpon_20pusillum_20[genbank_20GCA_5F000611755.1_202014-04-02]
40 sequences; 37,173,200 total letters
Query= NC_013797.1
Length=108592
Score E
Sequences producing significant alignments: (Bits) Value
seq9 102 6e-17
>seq9
Length=1292822
Score = 102 bits (112), Expect = 6e-17
Identities = 164/234 (70%), Gaps = 4/234 (2%)
Strand=Plus/Plus
Query 39489 ATCGCCGCCTCGCAAACGCAGTACCAAATGCAAAGTGCTTTCTTTTTGTATATTATAATC 39548
|| ||| || |||| | || || | |||||||||||| ||||| || || ||||||||
Sbjct 436441 ATTGCCACCACGCAGTCTCAACACGAGATGCAAAGTGCTCTCTTTCTGGATGTTATAATC 436500
Query 39549 GGCCAAAACGCGTTCATCGTCCAATTGTTTCCCGCCAAAAATTAAACGCTGCTGATCCGA 39608
| ||| || |||| ||||| || || ||| |||| || | ||||| ||||| |
Sbjct 436501 CGACAATGTCCGACCATCTTCCAACTGCTTGCCGGCAAAGATGAGGCGCTGTTGATCTGG 436560
Query 39609 GGGTACGCCTTCTTTGTC--GCATATTTTTTGTTTAATCGTCGCTACTGTGTCTGCGCTT 39666
||| | || |||||||| | || || | | || ||| | ||| || | ||||
Sbjct 436561 GGGAATACCCTCTTTGTCTTGGATCTTGCTCTTCACATTATCG--ATTGTATCCGAGCTT 436618
Query 39667 TCCACGTCCAAAGTAATTGTTTTACCCGTTAAAGTTTTTACGAAGATCTGCATG 39720
||||| || | || || ||||| || || || || || || ||||||||||||
Sbjct 436619 TCCACTTCGAGTGTGATGGTTTTCCCTGTCAAGGTCTTGACAAAGATCTGCATG 436672
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 347369430657320
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |