Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Endocarpon_20pusillum_20[genbank_20GCA_5F000611755.1_202014-04-02] 40 sequences; 37,173,200 total letters Query= NC_013797.1 Length=108592 Score E Sequences producing significant alignments: (Bits) Value seq9 102 6e-17 >seq9 Length=1292822 Score = 102 bits (112), Expect = 6e-17 Identities = 164/234 (70%), Gaps = 4/234 (2%) Strand=Plus/Plus Query 39489 ATCGCCGCCTCGCAAACGCAGTACCAAATGCAAAGTGCTTTCTTTTTGTATATTATAATC 39548 || ||| || |||| | || || | |||||||||||| ||||| || || |||||||| Sbjct 436441 ATTGCCACCACGCAGTCTCAACACGAGATGCAAAGTGCTCTCTTTCTGGATGTTATAATC 436500 Query 39549 GGCCAAAACGCGTTCATCGTCCAATTGTTTCCCGCCAAAAATTAAACGCTGCTGATCCGA 39608 | ||| || |||| ||||| || || ||| |||| || | ||||| ||||| | Sbjct 436501 CGACAATGTCCGACCATCTTCCAACTGCTTGCCGGCAAAGATGAGGCGCTGTTGATCTGG 436560 Query 39609 GGGTACGCCTTCTTTGTC--GCATATTTTTTGTTTAATCGTCGCTACTGTGTCTGCGCTT 39666 ||| | || |||||||| | || || | | || ||| | ||| || | |||| Sbjct 436561 GGGAATACCCTCTTTGTCTTGGATCTTGCTCTTCACATTATCG--ATTGTATCCGAGCTT 436618 Query 39667 TCCACGTCCAAAGTAATTGTTTTACCCGTTAAAGTTTTTACGAAGATCTGCATG 39720 ||||| || | || || ||||| || || || || || || |||||||||||| Sbjct 436619 TCCACTTCGAGTGTGATGGTTTTCCCTGTCAAGGTCTTGACAAAGATCTGCATG 436672 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 347369430657320