Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Endocarpon_20pusillum_20[genbank_20GCA_5F000611755.1_202014-04-02] 40 sequences; 37,173,200 total letters Query= NC_014637.1 Length=617453 Score E Sequences producing significant alignments: (Bits) Value seq9 109 2e-18 seq29 93.3 2e-13 >seq9 Length=1292822 Score = 109 bits (120), Expect = 2e-18 Identities = 203/294 (69%), Gaps = 8/294 (3%) Strand=Plus/Plus Query 451311 CAGTTACTGATGCAGTAATTACTGTTCCCGCTTATTTCAATGATGCACAACGGCAAGCAA 451370 |||| || ||||||| | || || || || ||||||||||| || || ||||| | Sbjct 953213 CAGTCACCCATGCAGTCGTCACCGTCCCAGCATATTTCAATGACAACCAGCGACAAGCCA 953272 Query 451371 CTAAAGATGCAGG-ACATATTGCTGGTTTAAATGTTCTTCGAATTATTAATGAACCTACA 451429 | || ||||| || ||| || || || ||||||||||| ||| | | || |||||||| Sbjct 953273 CCAAGGATGCTGGTACA-ATCGCCGGATTAAATGTTCTACGAGTGGTCAACGAACCTACT 953331 Query 451430 GCAGCTGCTCTAGCATATGGACTAGGAAAATCAAAAGAAACAGAAGaaaaaaaTATTTTA 451489 || || ||||| || || || |||| || |||| | ||| ||| ||| Sbjct 953332 GCGGCAGCTCTTGCCTACGGCCTAGACAA---GAAAGGCAGTGAACGCCAAATCATT--- 953385 Query 451490 GTATTTGATTTTGGTGGAGGAACTCATGATACTTCTGTACTTTCAATTGAAGATGGGGTA 451549 || | |||| | ||||| || ||| ||| ||| | || || || || ||||| || Sbjct 953386 GTCTATGATCTAGGTGGTGGTACTTTCGATGTTTCGCTGCTCTCTATCGAGGATGGCGTT 953445 Query 451550 TTTGAAGTAAAGGCAACCAATGGTGATACTCATCTAGGAGGTGAAGATATTGAT 451603 || || || |||| ||| ||| || |||||||| ||||| || || ||||| Sbjct 953446 TTCGAGGTGCAGGCTACCGCTGGAGACACTCATCTGGGAGGGGAGGACTTTGAT 953499 Score = 89.7 bits (98), Expect = 2e-12 Identities = 154/224 (69%), Gaps = 0/224 (0%) Strand=Plus/Minus Query 391050 ATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATCT 391109 ||| | || ||||| || ||| |||| || || || || || | || |||||||| || Sbjct 436899 ATGCAAATCTTCGTCAAGACATTGACCGGCAAGACCATCACCTTAGAAGTTGAATCGTCC 436840 Query 391110 GATAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCAA 391169 || | ||| || | | || || || || ||||||||||| |||||||| ||||| Sbjct 436839 GACACCATCGATAATGTGAAGAGCAAGATCCAGGATAAGGAAGGCATTCCTCCAGATCAG 436780 Query 391170 CAACGTTTAATTTTCTCAGGGAAACAACTTGAAGATGGAAGAACTTTGGCGGATTATAAT 391229 || || || || ||| | || || || || || ||||| | || || | || || || Sbjct 436779 CAGCGCTTGATCTTCGCCGGCAAGCAGCTGGAGGATGGTCGCACACTGTCCGACTACAAC 436720 Query 391230 ATTGATAAGGATGCAACACTTCACTTAGTATTAAGACTGAGAGG 391273 ||| | || || | ||||| || | || | |||||| |||| Sbjct 436719 ATTCAGAAAGAATCTACACTACATCTTGTTCTGAGACTGCGAGG 436676 >seq29 Length=320926 Score = 93.3 bits (102), Expect = 2e-13 Identities = 146/209 (70%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 451244 CCTGAAGAAATTTCATCTATGGTTCTTACTAAAATGAAAGAAACAGCAGAACAATATATT 451303 || || || || ||||||||||| | || || ||| ||| || || || ||| || Sbjct 306207 CCAGAGGAGATCTCATCTATGGTCTTGACCAAGATGCGAGAGACTGCTGAGTCATACCTT 306148 Query 451304 GGTTCTCCAGTTACTGATGCAGTAATTACTGTTCCCGCTTATTTCAATGATGCACAACGG 451363 ||| | | || | | || || | ||||| || || || ||||| || ||||||| Sbjct 306147 GGTGGTACTGTCAACAACGCCGTCGTCACTGTCCCAGCATACTTCAACGACTCACAACGA 306088 Query 451364 CAAGCAACTAAAGATGCAGGACATATTGCTGGTTTAAATGTTCTTCGAATTATTAATGAA 451423 ||||| || |||||||| || | || |||||| | || || | || ||||| || ||| Sbjct 306087 CAAGCCACCAAAGATGCCGGCCTGATCGCTGGTCTCAACGTCTTGCGCATTATCAACGAA 306028 Query 451424 CCTACAGCAGCTGCTCTAGCATATGGACT 451452 ||||| || ||||| | || ||||| || Sbjct 306027 CCTACCGCCGCTGCCATCGCCTATGGTCT 305999 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1975717387444320