Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Endocarpon_20pusillum_20[genbank_20GCA_5F000611755.1_202014-04-02] 40 sequences; 37,173,200 total letters Query= NC_014765.1 Length=198519 Score E Sequences producing significant alignments: (Bits) Value seq29 268 1e-66 seq18 176 6e-39 seq9 100 4e-16 seq33 82.4 1e-10 >seq29 Length=320926 Score = 268 bits (296), Expect = 1e-66 Identities = 512/745 (69%), Gaps = 12/745 (2%) Strand=Plus/Plus Query 7401 TATCTTTCTTATGTTTACGTTTAAACTCTTCAGAGAAGTGTCGAAGGAGTCTCGAATCGA 7460 || |||| || || || ||||| ||||| | | ||| || || |||| |||| Sbjct 305796 TACCTTTTTTGTGCTTGCGTTTGAACTCGTTTGTGAAATGGTTAACAAGTCGGTTGTCGA 305855 Query 7461 AATCTTCACCACCCAAGTGTGTATCCCCCGCGGTCGCTTTGACTTCAAAGATACCTCCTT 7520 | || |||||||||||||| ||||| || || || | ||||| ||||||||||| ||| Sbjct 305856 AGTCCTCACCACCCAAGTGGGTATCACCAGCAGTAGACTTGACCTCAAAGATACCCTCTT 305915 Query 7521 CAATGTTTAACAACGAAACATCAAACGTACCACCACCCAGGTCAAAAATGAGTACGTTCG 7580 | || | || | || ||||| || |||||||| || || ||||| || | ||||| Sbjct 305916 CGATTGTCAAGAGGGAGACATCGAATGTACCACCGCCAAGATCAAAGATCAAGACGTTGC 305975 Query 7581 TATCGTCGTCTTTGTTCTTATCGAGACCGTACGCGATAGCCGCCGCCGTTGGTTCATTAA 7640 || | || ||||| || ||||| || ||||| || || || || ||||| || | Sbjct 305976 GCTCACCCTCGGCCTTCTTGTCAAGACCATAGGCGATGGCAGCGGCGGTAGGTTCGTTGA 306035 Query 7641 TAATACG-AAGACAGTTCAGGCCAGCAAT-AGTTGCCG-CATCTTTCGTCGCTTGTCGTT 7697 |||| || ||||| ||| || ||||| || || |||| ||||||| || |||||||||| Sbjct 306036 TAATGCGCAAGAC-GTTGAGACCAGCGATCAG--GCCGGCATCTTTGGTGGCTTGTCGTT 306092 Query 7698 GCGAATCGTTAAAGTAGGCCGGGACCGTTACGACCGCGTCCGTGACTTTCTTACCGAGAT 7757 | || ||||| ||||| || ||||| || ||||| |||| |||| | ||| || | Sbjct 306093 GTGAGTCGTTGAAGTATGCTGGGACAGTGACGACGGCGTTGTTGACAGTACCACCAAGGT 306152 Query 7758 ACGATTCCGCGATATCTTTCATTTTGGTAAGAACCATCGATGAAATCTCTTCAGCCGCAA 7817 | || || || | ||| ||| ||||| | ||||| ||||| ||||| || | | | Sbjct 306153 ATGACTCAGCAGTCTCTCGCATCTTGGTCAAGACCATAGATGAGATCTCCTCTGGTGTGA 306212 Query 7818 ACTGTTTCGTTTCACCGTTAAAATCAACTTCAATCATGGGTTTATCCGCAGCACCGGGGA 7877 | || | ||||| || || || || | || | ||||| |||| | | | Sbjct 306213 AGAACTTGCTCTCACCCTTGAATTCGACCTTGATGACCGGTTT-GCCGC--CCTTGTCAA 306269 Query 7878 TAACCTTATACGACCAATCTTTCATATCGTCTTGGACCTGTTGGTCCGAAAACTTTCTTC 7937 |||| | | | | ||||||||| | || || | || | || || | | Sbjct 306270 CGACCTCGAAGGGGAAGTGCTTCATATCGGCCTGAACTTCAGCATCGGCGAATTTGCGAC 306329 Query 7938 CGATAAGACGCTTTGCATCAAAAACTGTGTTTTTGGGGTTCATGGCTGTTTGGTTCTTCG 7997 |||| ||||||||||| || || || ||||| ||| |||||||| || ||||| | Sbjct 306330 CGATCAGACGCTTTGCGTCGAAGACCGTGTTGGAGGGATTCATGGCGACCTGATTCTTGG 306389 Query 7998 CCGCGTCCCCGATAAGACGTTCATTATTTTCCGTAAACGCGACGTACGATGGGGTCGTTC 8057 | | ||| || || ||||| ||| || || || || ||||| | ||||| || |||| Sbjct 306390 CTGAGTCACCAATCAGACGCTCAGTA---TCTGTGAAAGCGACAAAGGATGGTGTTGTTC 306446 Query 8058 GATTCCCTTGGTCGTTCGCAATAATTTCTACGCGGTCGTTTTGCCAGACGCCGACGCACG 8117 | || |||||||| || ||||| ||||| | | ||| | | | ||| || ||||||| Sbjct 306447 GGTTGCCTTGGTCATTGGCAATGATTTCGATTCTGTCATCTCGGTAGATACCCACGCACG 306506 Query 8118 AATACGTTGTTCCTAAATCAATACC 8142 | || ||||| || | |||||| || Sbjct 306507 AGTAGGTTGTACCCAGATCAATGCC 306531 >seq18 Length=894979 Score = 176 bits (194), Expect = 6e-39 Identities = 984/1557 (63%), Gaps = 60/1557 (4%) Strand=Plus/Minus Query 104469 TTGGTCTATATACACACCTCTATCCGCCGCCATATCGATGATTGTTTTTTGACTCATTTC 104528 |||||| || | |||| | ||| || ||||| | | || ||| ||| || || || Sbjct 725371 TTGGTCAATGAATGCACCCCGATCAGCAGCCATCTGCACAATAGTTCGTTGGCTGATCTC 725312 Query 104529 CCATACGGTTTTATACAATTCCTTAAGATCATCGGGTATATCAATAATGTTTTGAACAGA 104588 ||| || || || |||||| | || | |||| | || || | ||| ||||| || || Sbjct 725311 CCAAACAGTCTTGTACAATGCTTTGATATCAGCAGGAATGTTGGGAATATTTTGGACTGA 725252 Query 104589 CCCATTTGCCTTCACCATAAGAT-CT----TTCATTTCCTTCGACCAGAGTCCACGTTCT 104643 || ||| ||| || | ||| || ||||| | | |||||||| || | || Sbjct 725251 GCC----GCCATCAGCA-ATGATTCTGTTCTTCATGTTGTCGGACCAGAGACCCAGATCA 725197 Query 104644 TTCAAATCGTTTACTAAATGTTTGTTTACGACGACAAATTCACCCGCGAGTGTTCGTCTC 104703 | ||| || | | | || ||||| ||||| || || || || | Sbjct 725196 ACAAGATCTTTCAACAGCCATGGATTGACGACCTGGAATTCTCCAGCCAGGACGCGACGA 725137 Query 104704 AAATAGATATTGGTCGTATACGGTTCGAAACACTCGTTGTTCCCTAAAATCTGGGATGTG 104763 | |||||||| | ||||| || ||||||||||||||||| || || |||||||| ||| Sbjct 725136 GAGTAGATATTCGAGGTATATGGCTCGAAACACTCGTTGTTTCCCAAGATCTGGGAGGTG 725077 Query 104764 GATGCGGTAGGCATAGGTGCAAGAAGAAGACTATTCATAGTTCCTTTCTTAACAAG---- 104819 ||||| || |||||||| || | ||| ||| || | || | ||| | | Sbjct 725076 GATGCTGTCGGCATAGGCGCCACAAGGAGAGAGTTGCGAACACCATGCTTGGCGATGTCA 725017 Query 104820 ---TTTACGCATGGCATTCCAATCGTATCGACCACTAAACTTTGGGTCTCGAT--CCCAC 104874 || | || |||| |||||| |||| || | ||| | || ||||| Sbjct 725016 GCCTTCAAGC-TGGC---CCAATC-------CCACAAATCCGACGGTGT-GACGCCCCAC 724969 Query 104875 ATATCGAATTGAAGAATACCTTTACTAAAC-GGTGACCCCTTAAACGTTTCATAAGGACC 104933 || ||| | ||||| ||||| | | || || || |||| |||| ||||| | || Sbjct 724968 ATGTCGTACTGAAGCTCGCCTTT-CGAGACTGGAGAACCCTCGTACGTCTCATATGTTCC 724910 Query 104934 GTACATTTCGGCAAGTTCACACGACGATTCGAGTGATGCGTGGTAGATAGTTTCGAATAT 104993 | | || |||||| ||||| || | ||||| | || ||||| ||||| ||||| Sbjct 724909 GAGCTCTTTGGCAAGCTCACAGGAGGCAGTGAGTGCGCCATGATAGATCGTTTCAAATAT 724850 Query 104994 ATCAATGTTGAGTTTTCTCGATTCTTCTGAACCGAATGTCATTCTTAACATGATAAACAC 105053 | |||| |||| | | ||| ||| |||||| || | || | ||| | Sbjct 724849 CTGGGTGTTTAGTTGACGTGCTTCAGGAGAATCGAATGGCAGACGCAATGCAAGAAAGGC 724790 Query 105054 GTCAGCGAGACCCTGAACACCAATACCGATGGGTCTGTGACGCATATTTGAACGTTTCCC 105113 || || |||||||||||||||| ||| || ||||| || || | ||| || | Sbjct 724789 ATCTGCAAGACCCTGAACACCAAGACCAATAGGTCTATGTCGGAAATTGCTTCGGCGTGC 724730 Query 105114 GTTTTCGGTTGGGTAAAAGTTTTTATCAATAACCTTGTTTAAGTTACGTGTAACCATTTT 105173 | ||| ||| ||| | | || || || |||| | ||| ||||| || | | Sbjct 724729 CTCCTCGACTGGATAATGGCTGCGTTCGATGACTCTGTTCAGGTTGCGTGTCACGACCT- 724671 Query 105174 CGTAACACGATGTA-ACTCTTCATGGTTAAACTCGTTCTT--CTCGAC----ATCAACGT 105226 | | ||| || | | || ||| |||| || |||||| |||||| | Sbjct 724670 -GGACCACTTCGTGGAGGC-----GGCCAAAGTCGTACTCGCCTCGACCAGAATCAACAT 724617 Query 105227 ATTTTGGTAACGCGATTGATGCGAGATTACATACGGCGGTTTCTTCCTTATCCG-TAAAC 105285 | | || | || | ||||| ||||| || || ||| || || | | || | | Sbjct 724616 AAGTGGGAAGAGCCAACGATGCCAGATTGCAAACTGCGACCTCATC-TGGTGCGCTGTAT 724558 Query 105286 TCCAGAATTTCTGTACACAAATTTGATGATTTAATCGTACCAACGTGTTTATGGTTCGAC 105345 || | ||| || || || | ||| || | || || |||| || || ||||| | Sbjct 724557 TCAACAATCTCAGTGCAGAGATTGGAGCTTCGGATAGTCCCAAGGTTCTTCTGGTTGCTC 724498 Query 105346 TTTTCATTACACGCGTCTTTGTAAAGCATATATGGGGTTCCCGTTTCACTTTGGGATTTA 105405 |||| |||||||| || || |||||||| || || || || || || | || || | | Sbjct 724497 TTTTTGTTACACGCATCCTTATAAAGCATGTACGGCGTCCCAGTCTCTGTCTGAGACTCA 724438 Query 105406 ATAATTGCTTTCCAAATCTCCGAAGCTGGTACAACTTTAGTTGCGATACCTTCAGATTCG 105465 | |||||| | ||| | | | || ||| |||| | ||||| ||| Sbjct 724437 AGAATTGCATACCAGAGTTTCTGGGCCTTCACAGCTTTCCGACCACGGCCTTCCTTCTCG 724378 Query 105466 TATTTCTCGTAAAGATCTTCAAACTCTTTACCGTACACGTCTGAAAGACCCTTTGCCTGA 105525 ||| |||||||||| | || ||||| | ||| ||||| |||| || || |||| Sbjct 724377 TATCTCTCGTAAAGTGCCTCGAACTCGTCACCATACACATCTGCCAGGCCTGGAGCCTCG 724318 Query 105526 TCAGGACAAAACAATGACCAATTACCATCGGATTCAACGCGTTTCATGAACAAATCTGGA 105585 | ||| || || | | ||| | | || || || ||||||||||| | ||||| Sbjct 724317 TGAGGGCAGAAGAGAGTCCAGTCAAGATTCTTCTCGACACGTTTCATGAATAGGTCTGGG 724258 Query 105586 ATCCACATGGCTGAAAAGAGGTCTCGACACCTCGCCTCTTCATCACCTTGATTCAAACGA 105645 |||| | || | ||||| ||||| || || || | || |||||| ||| Sbjct 724257 GTCCAGAGAGCATAGAAGAGATCTCGGGCCCGGCTTTCCTCCTTGCCGTGATTCTTGCGA 724198 Query 105646 ATTTCGAGAAAATCGAGAATATCGGCGTGCCATGGTTCTAAATAGACTGCAATAG-ACCC 105704 | || | ||| || | | ||||| |||||||| || | ||| | || | | |||| Sbjct 724197 AGGTCCAAAAAGTCAAAGACGTCGGCATGCCATGGCTCAAGATATATAGCGAAGGCACCC 724138 Query 105705 TTTACGACGCC-----CCGC-TTGATTGACATATCTTGCGGTTGAGTTATACACTCGTAA 105758 ||||| |||| ||||| |||||| | ||||| ||| | || ||||| Sbjct 724137 G----GACGCTTGTTGCCGCCTTGATCGACATAACGAGCGGTGTTGTTGAAGACGCGTAA 724082 Query 105759 CATTGGAATAATACCATCGGATGTTCCATTTGTTCCACGAATATGTGATTTATTTGCACG 105818 ||| ||| | | || | ||||| |||||||| |||| ||| | || | | || || Sbjct 724081 CATAGGAGTCAATCCGTTGGATGACCCATTTGTGCCACCAATGTAGGAACCAGTAGCGCG 724022 Query 105819 TACATCGTGAACGTGTAACCCAATACCCCCAGCCCACTTACTGATACGCGCACACTCTTT 105878 | |||||||| | ||||||||| ||||| ||| ||| ||||| ||| Sbjct 724021 AATGCAGTGAACGTTGAGCCCAATACCTCCAGCGTTCTTGGAGATCATGGCACAGATTTT 723962 Query 105879 TACTGTATCGTAAATACCGTCGATACTATCTTCCTTATTCGCAATCAGGAAACACGATGA 105938 | || ||||| || || || ||||| || || || | | || ||||| || || | Sbjct 723961 GAGAGTGTCGTAGATGCCTTCAATACTGTCCTCTTTCATATCGATGAGGAAGCAGGACGC 723902 Query 105939 CATTTGTGGTCTGGGTGTACCAGCATTGAACAGAGTTGGTGTTGCATGAATGAACAA 105995 || ||| | ||||||||||| |||||||| || || | ||||| |||| || Sbjct 723901 CAACTGTCCTTGCGGTGTACCAGCGTTGAACAGCGTAGGAGAAGCATGTGTGAAGAA 723845 >seq9 Length=1292822 Score = 100 bits (110), Expect = 4e-16 Identities = 118/159 (74%), Gaps = 3/159 (2%) Strand=Plus/Minus Query 7987 TTGGTTCTTCGCCGCGTCCCCGATAAGACGTTCATTATTTTCCGTAAACGCGACGTACGA 8046 ||||||||| || || || || | | |||||| | || ||||||| || |||||||| Sbjct 952921 TTGGTTCTTGGCTGCATCTCCCACTAAACGTTCTTCAT---CCGTAAAGGCCACGTACGA 952865 Query 8047 TGGGGTCGTTCGATTCCCTTGGTCGTTCGCAATAATTTCTACGCGGTCGTTTTGCCAGAC 8106 || || ||||||||||||||||||| |||| ||||| || |||| ||| || Sbjct 952864 GGGTGTTATTCGATTCCCTTGGTCGTTGACAATGATTTCGACTTTTCCGTTGTGCATCAC 952805 Query 8107 GCCGACGCACGAATACGTTGTTCCTAAATCAATACCGAT 8145 || || || ||||| |||||||| | |||||| || || Sbjct 952804 ACCAACACAAGAATAGGTTGTTCCCAGATCAATCCCAAT 952766 Score = 89.7 bits (98), Expect = 7e-13 Identities = 236/357 (66%), Gaps = 9/357 (3%) Strand=Plus/Minus Query 7456 ATCGAAATCTTCACCACCCAAGTGTGTATCCCCCGCGGTCGCTTTGACTTCAAAGATACC 7515 ||| || || || || |||| || || || || ||||| || | || || || | || Sbjct 953499 ATCAAAGTCCTCCCCTCCCAGATGAGTGTCTCCAGCGGTAGCCTGCACCTCGAAAACGCC 953440 Query 7516 TCCTTCAATGTTTAACAACGAAACATCAAACGTACCACCACCCAGGTCA---AAAATGAG 7572 | || || | || ||||||||| || ||||||||||| || ||| | ||||| Sbjct 953439 ATCCTCGATAGAGAGCAGCGAAACATCGAAAGTACCACCACCTAGATCATAGACAATGAT 953380 Query 7573 TACGTTCGTATCGTCGTCTTTGTTCTTATCGAGACCGTACGCGATAGCCGCCGCCGTTGG 7632 | | ||| || | || ||||| || || ||||| || | ||| ||||| || || Sbjct 953379 TTGG--CGT-TCACTGCCT---TTCTTGTCTAGGCCGTAGGCAAGAGCTGCCGCAGTAGG 953326 Query 7633 TTCATTAATAATACGAAGACAGTTCAGGCCAGCAATAGTTGCCGCATCTTTCGTCGCTTG 7692 ||| || | | || ||| || | || || || || | ||||| || || ||||| Sbjct 953325 TTCGTTGACCACTCGTAGAACATTTAATCCGGCGATTGTACCAGCATCCTTGGTGGCTTG 953266 Query 7693 TCGTTGCGAATCGTTAAAGTAGGCCGGGACCGTTACGACCGCGTCCGTGACTTTCTTACC 7752 ||| || || || || || || ||||| || ||||| || | |||||| |||| || Sbjct 953265 TCGCTGGTTGTCATTGAAATATGCTGGGACGGTGACGACTGCATGGGTGACTGTCTTGCC 953206 Query 7753 GAGATACGATTCCGCGATATCTTTCATTTTGGTAAGAACCATCGATGAAATCTCTTC 7809 | ||| || || | || ||||| || ||||| ||| | || ||||| || Sbjct 953205 CAAATAACTCTCAGCAACCTCCTTCATCTTTCCAAGAATCATGGCCGAGATCTCCTC 953149 >seq33 Length=225063 Score = 82.4 bits (90), Expect = 1e-10 Identities = 163/237 (69%), Gaps = 6/237 (3%) Strand=Plus/Minus Query 11448 CTTACCAATCGCATCAATTTCATCTATAAAGATAATACACGGTTGATTTTCACGTGCCAA 11507 ||| ||||| |||||||| ||||| ||||| || ||||| || ||| | || || | Sbjct 181736 CTTTCCAATGGCATCAATCTCATCGATAAATATGATACAAGGGGTATTCTTGCGAGC--A 181679 Query 11508 TTC--AAATATATCACGGACTCTTTTTGCGCCTACGCCTACAAACATTTCAACGAACGAT 11565 ||| ||| | ||| || ||||| | || || || ||||||||||| || ||| Sbjct 181678 TTCGAAAACAGATCTCGCACTCTCGACGGCCCAACCCCAACAAACATTTCGACAAACTCC 181619 Query 11566 GACCCCGAACACTGAATAAAA-GGAACGGAAGATTCACCCGCTATAGCACGTGCTAAAAG 11624 || |||| | || || ||||| || || |||||||| || | || || | || Sbjct 181618 GAACCCG-AGACCGAGTAAAAGGGTACTCCGGATTCACCTGCCGTTGCTTTGGCAAGGAG 181560 Query 11625 TGTTTTACCTGTACCTGGTTTACCTGTTAATAATGCACCCCTTGGTATTTTAGCACC 11681 ||| ||||| ||||| ||| |||| ||| | ||||| | || ||||| || || Sbjct 181559 TGTCTTACCAGTACCAGGTGGGCCTGATAAGATCGCACCACGAGGGATTTTGGCGCC 181503 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 635132482433600