Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Endocarpon_20pusillum_20[genbank_20GCA_5F000611755.1_202014-04-02] 40 sequences; 37,173,200 total letters Query= NC_014766.1 Length=194022 Score E Sequences producing significant alignments: (Bits) Value seq18 196 6e-45 seq9 123 3e-23 >seq18 Length=894979 Score = 196 bits (216), Expect = 6e-45 Identities = 894/1388 (64%), Gaps = 35/1388 (3%) Strand=Plus/Plus Query 111619 ACATGTTCATGCGGGTCGCGATCGGTATCCATGGGGAAGATATTGATTCTGTTTTGGAGA 111678 ||||| | ||||| || | | || |||||||| || || || || | | || | Sbjct 723762 ACATGCTTATGCGTGTTTCTGTGGGCATCCATGGCGACGACATCGAGAGGGCGATTGAAA 723821 Query 111679 CATACGACAAGATGTCCCGTGGTATGTTCATCCACGCAACACCAACCCTCTTCAACGCTG 111738 | ||| || ||||||| | |||| || || | || || || |||||||||| Sbjct 723822 CTTACAACCTCATGTCCCAAAAGTTCTTCACACATGCTTCTCCTACGCTGTTCAACGCTG 723881 Query 111739 GTACACCAAGACCCCAAATGTCCAGTTGTTTCCTTATTGCAAACAAGGAGGATTCAATCA 111798 ||||||| | || || | || ||||| || | | || ||||| || Sbjct 723882 GTACACCGCAAGGACAGTTGGCGTCCTGCTTCCTCATCGATATGAAAGAGGACAGTATTG 723941 Query 111799 ATGGCATTTACGGCACTCTCACTGAATGTGCCCAAATCTCAAAGTGGGCTGGTGGTATCG 111858 | ||||| |||| |||||||| |||||| ||||| ||| ||||| ||||| | Sbjct 723942 AAGGCATCTACGACACTCTCAAAATCTGTGCCATGATCTCCAAGAACGCTGGAGGTATTG 724001 Query 111859 GGATGCACATCCA-TGATGTCAGAGCCAACAAGTCTCGTA--TTAGAGGTACAAATGGTC 111915 || | || | || || || | || | | || || || || | || |||||||| Sbjct 724002 GGCTCAACGTTCACTGCATTC-GCGCTA-CTGGT-TCCTACATTGGTGGCACAAATGGGT 724058 Query 111916 AATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGCGCTATGTAAACC 111975 ||| | || | | ||| ||| | ||||| || ||| ||| || || ||||| | | Sbjct 724059 CATCCAACGGATTGACTCCTATGTTACGCGTCTTCAACAACACCGCTCGTTATGTCGATC 724118 Query 111976 AAGCTGG------GCGTCGCAAGGGATCTATCGCAGTCTATCTTGAGCCATGGCACGCGG 112029 ||| || ||||| ||| | |||| | ||||||||||||||||| || | Sbjct 724119 AAGGCGGCAACAAGCGTCC---GGGTGCCTTCGCTATATATCTTGAGCCATGGCATGCCG 724175 Query 112030 ATATCATGGAGTTCCTTGAGTTGCGTCTCAACCAAGGTGATGAGGAGGCGCGGTGCCGCG 112089 | || | || || | || | || || || || | ||||| ||| ||| | Sbjct 724176 ACGTCTTTGACTTTTTGGACCTTCGCAAGAATCACGGCAAGGAGGAAAGCCGGGCCCGAG 724235 Query 112090 ATCTCTTCTCCGCTCTCTGGATTCCAGATCTCTTCATGAAGAGAGTTGAGGAGAGTGGCA 112149 ||||||||| |||||||||| ||||| || |||||||| | || ||| ||| | Sbjct 724236 ATCTCTTCTATGCTCTCTGGACCCCAGACCTATTCATGAAACGTGTCGAGAAGAATCTTG 724295 Query 112150 ATTGGTCTCTCTTTTGTCCAGACAAGGCACCCGGTCTCTCCGATGCCGTGGGTGAGGAGT 112209 | ||| ||||||| || || || |||| || || || | |||| ||||| |||| Sbjct 724296 ACTGGACTCTCTTCTGCCCTCACGAGGCTCCAGGCCTGGCAGATGTGTATGGTGACGAGT 724355 Query 112210 TTGAAGCCCTCTACACAAAGTACGAGGAAGAAAGTCGGGCGACTGCGA-CGGTGCCAGCT 112268 | || || || ||| | ||||| |||| ||| | | | | | | | ||| || Sbjct 724356 TCGAGGCACTTTACGAGAGATACGA-GAAGGAAGGCCGTGGTCGGAAAGCTGTGAAGGCC 724414 Query 112269 GCCGATGTGTGGAAAGCTATTCTCAAGTCTCAAACCGAGACTGGTACACCATATATGCTT 112328 | | ||| | || ||||| ||||||| || |||||||| || || || |||||| Sbjct 724415 CAGAAACTCTGGTATGCAATTCTTGAGTCTCAGACAGAGACTGGGACGCCGTACATGCTT 724474 Query 112329 TACAAAGACGCCTGTAACCAAAAGAGTAATCAAAAGAA-TTTGGGTGTGATCAAGAGTTC 112387 || || || || |||||| ||||||| || || ||||| ||||| | ||| || || Sbjct 724475 TATAAGGATGCGTGTAACAAAAAGAGCAACCAGAAGAACCTTGGGACT-ATCCGAAGCTC 724533 Query 112388 CAACCTCTGTACAGAAATCTTGGAATTTACAG-ACA-AAGATGAGACGGCTGTGTGTAAC 112445 ||| ||||| || || || | ||| ||||| || ||||||| || || || || Sbjct 724534 CAATCTCTGCACTGAGATTGTTGAA--TACAGCGCACCAGATGAGGTCGCAGTTTGCAAT 724591 Query 112446 CTCGCATCAATCGCTCTCCCCAAGTATGTGGATCCAGAGACAAAGACA-TTTGATTATGA 112504 || ||||| | ||||| |||| ||||| ||| | | | | | | | | || | || Sbjct 724592 CTGGCATCGTTGGCTCTTCCCACTTATGTTGATTCTG-GTCGAGGCGAGTACGACTTTGG 724650 Query 112505 AAAACTCCACGAAGTTACGAAAACTGTCACAAAAAACCTAAACAGAGTTATTGATAGAAA 112564 ||||||||||| | || ||| ||||| |||||||| || || | | Sbjct 724651 CCGCCTCCACGAAGTGGTCCAGGTCGTGACACGCAACCTGAACAGAGTCATCGAACGCAG 724710 Query 112565 TTTTTACCCCGTTGAGACTGCTCGTAAATCTAATATGAGACACCGTCCAATTGGTCTCGG 112624 ||| || || ||| || || | ||| | |||| | || |||||||| || Sbjct 724711 CCATTATCCAGTCGAGGAGGCACGCCGAAGCAATTTCCGACATAGACCTATTGGTCTTGG 724770 Query 112625 TGTCCAAGGTCTCGCGGATG-TATTCATTCTTTGTCGCCACGCATTTGATTCCGACGAAG 112683 ||| || ||||| || |||| ||| | | ||| || | |||| ||||| |||| Sbjct 724771 TGTTCAGGGTCTTGCAGATGCCTTTCTTGCATTG-CGTCTGCCATTCGATTCTCCTGAAG 724829 Query 112684 CGAAGGAAATCAATGCGCGTATATTTGAGACAATGTATCACGCCGCTCTTGAGGCGAGTT 112743 | || | || | | |||||||| || || ||||| | ||| || || | Sbjct 724830 CACGTCAACTAAACACCCAGATATTTGAAACGATCTATCATGGCGCACTCACTGCCTCCT 724889 Query 112744 CGGAG-TTGGCAGAG-GTTGATGGTCCATATGAAACCTTTGAGGGTTCTCCAGCTTCACA 112801 ||| ||| || || | | || ||||||| || | ||||||||||||| || | Sbjct 724890 GTGAGCTTGCCAAAGAGCT--CGGAACATATGAGACGTACGAGGGTTCTCCAGTCTCGAA 724947 Query 112802 AGGGGTGCTTCAATTTGATATGTGGGAAGGTGAGACC-AAGCTTCACTACGACTGGGAC- 112859 ||| | |||||| | || ||||||| || | ||| | | | || |||| | Sbjct 724948 AGGCGAGCTTCAGTACGACATGTGGG-GCGTCACACCGTCGGATTTGTGGGATTGGGCCA 725006 Query 112860 GCTCTCAAGGAACGCATCAAGGAGAAGGGTCTTCGTAACAGTCTTTTGATGGCACCAATG 112919 ||| | |||| |||| || | ||| |||| ||| ||| | |||| || ||| Sbjct 725007 GCT-TGAAGGCTGACATCGCCAAGCATGGTGTTCGCAACTCTCTCCTTGTGGCGCCTATG 725065 Query 112920 CCAACAGCCTCCACCGCACAAATCTTGGGTAATAATGAATGCTTTGAACCCTACACGACG 112979 || ||||| |||||| | || |||||||| || || || || || || || || || || Sbjct 725066 CCGACAGCATCCACCTCCCAGATCTTGGGAAACAACGAGTGTTTCGAGCCATATACCTCG 725125 Query 112980 AACATCTA 112987 || ||||| Sbjct 725126 AATATCTA 725133 >seq9 Length=1292822 Score = 123 bits (136), Expect = 3e-23 Identities = 176/245 (72%), Gaps = 6/245 (2%) Strand=Plus/Plus Query 102090 CTCTTTGAAGCCATCCAAACAGTTCCATGTATTCAAAAGAAAGCGGATTGGGCTATGAAG 102149 || || || ||||| | || |||| || || | ||| ||||| | |||||| | Sbjct 486799 CTGTTCGACGCCATTGACACCATTCCTTGCATCCGAAAAAAAGCCAACTGGGCTCTTCGA 486858 Query 102150 TGG-TTTGATACAA--AGTCGCGTTCCTTTGCTGAGCGACTCTTCGCATTTGCGTGTGTT 102206 ||| ||| |||| ||||| || ||||| | || || | || || || || Sbjct 486859 TGGATTTCGGACAAGGAGTCGACTT---TTGCTCAACGCCTTGTTGCCTTCGCAGCCGTC 486915 Query 102207 GAGGGTATCTTCTTCTCTGGTTCCTTCTGCGCTATTTATTGGCTCAAGAAGCGAGGTCTC 102266 ||||| |||||||| ||||| |||||| || | | ||||||||||||||| || || Sbjct 486916 GAGGGAATCTTCTTTTCTGGCTCCTTCGCATCTGTCTTTTGGCTCAAGAAGCGTGGCCTG 486975 Query 102267 ATGCCAGGTCTCTGCTTCTCCAACGAGCTTATCTCTCGTGACGAGGGACTCCACCAAGAG 102326 |||||||||||| |||||| || ||||| ||||||||||||||||| || || ||| Sbjct 486976 ATGCCAGGTCTCACCTTCTCGAATGAGCTGATCTCTCGTGACGAGGGTCTGCATACAGAT 487035 Query 102327 TTTGC 102331 ||||| Sbjct 487036 TTTGC 487040 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 620742089628800