Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Endocarpon_20pusillum_20[genbank_20GCA_5F000611755.1_202014-04-02] 40 sequences; 37,173,200 total letters Query= NC_014767.1 Length=184095 Score E Sequences producing significant alignments: (Bits) Value seq18 206 3e-48 seq9 129 7e-25 >seq18 Length=894979 Score = 206 bits (228), Expect = 3e-48 Identities = 1013/1589 (64%), Gaps = 51/1589 (3%) Strand=Plus/Minus Query 109507 GACTGAGACTGATCGATGAATCGACCACGATCAGCCGCCATGTCGATGATACACTTTTGG 109566 ||||| || || || |||||| ||| |||||||| ||||| | | ||| |||| Sbjct 725379 GACTGGGATTGGTCAATGAATGCACCCCGATCAGCAGCCATCTGCACAATAGTTCGTTGG 725320 Query 109567 CTAATTTCCCAGACAGTCTTGTACAAATTCTTGATATCATCGGGAATGTCCACGATGTTT 109626 || || ||||| |||||||||||||| ||||||||| | ||||||| || ||| Sbjct 725319 CTGATCTCCCAAACAGTCTTGTACAATGCTTTGATATCAGCAGGAATGTTGGGAATATTT 725260 Query 109627 TGAATAGAGCCACCAGCCTTCA-CCATGA---GATCCTTCATCTCTTTCGACCAGAGACC 109682 || | ||||| ||| ||| | |||| | |||||| | | ||||||||||| Sbjct 725259 TGGACTGAGCC----GCCATCAGCAATGATTCTGTTCTTCATGTTGTCGGACCAGAGACC 725204 Query 109683 GACCTTTTTGAGATC-GTCAACA-AGATGCTTGTTGACCACGACAAATTCACCAGCAAGT 109740 | | ||||| |||||| ||| ||||| || ||||| ||||| || Sbjct 725203 CAGATCAACAAGATCTTTCAACAGCCATG--GATTGACGACCTGGAATTCTCCAGCCAGG 725146 Query 109741 GTGCGTCGGAGGTAGATGTTAGTCGTGTAGGGTTCGAAACACTCATTGTTGCCTAGGATT 109800 ||| || |||||| || | || || || ||||||||||| ||||| || | ||| Sbjct 725145 ACGCGACGAGAGTAGATATTCGAGGTATATGGCTCGAAACACTCGTTGTTTCCCAAGATC 725086 Query 109801 TGTGCAGTGGAAGCTGTGGGCATGGGAGCCATGAGAAGACTGTTTCGGAGACCCT--TCG 109858 || | ||||| ||||| ||||| || |||| || ||| ||| || | ||| | | | Sbjct 725085 TGGGAGGTGGATGCTGTCGGCATAGGCGCCACAAGGAGAGAGTTGCGAACACCATGCTTG 725026 Query 109859 TCTTTACCCGC--TCACGCATTGCGTCCCAATCATAACGACCACTAAATTTA--GTCTCA 109914 | | | || ||| || | ||||||| |||| || | || | | Sbjct 725025 GCGATGTCAGCCTTCAAGC----TGGCCCAATC-------CCACAAATCCGACGGTGTGA 724977 Query 109915 CCATCCCACATATCTGGTTGAAGTACACCCTCAGCAGCAGGAGAACCCTTGAAACTCTCG 109974 | ||||||| || ||||| | || | | | |||||||||| | | |||| Sbjct 724976 -CGCCCCACATGTCGTACTGAAGCTCGCCTTTCGAGACTGGAGAACCCTCGTACGTCTCA 724918 Query 109975 TACGACCCCTCAACCTCGGCCAACTCGGATGAAGCCTCTAGTGCCGCATGATACATAGTC 110034 || | || | | ||| | ||| | || || ||||| ||||||| || || Sbjct 724917 TATGTTCCGAGCTCTTTGGCAAGCTCACAGGAGGCAGTGAGTGCGCCATGATAGATCGTT 724858 Query 110035 TCAAAAATATGAGCATTCATGAGGCGAGACTCTTCACAGTCGAAGGGAAGACCACAAAG- 110093 ||||| || || | || | | || | || | | ||||| || ||| | ||| | Sbjct 724857 TCAAATATCTGGGTGTTTAGTTGACGTGCTTCAGGAGAATCGAATGGCAGA-CGCAATGC 724799 Query 110094 AATAAACACATCCGCTAGACCCTGAACACCGAGACCAATGGGGCGATGCTTCATGTTAGA 110153 || ||| |||| || |||||||||||||| |||||||| || | ||| | || Sbjct 724798 AAGAAAGGCATCTGCAAGACCCTGAACACCAAGACCAATAGGTCTATGTCGGAAATTGCT 724739 Query 110154 GCGTCGAGCAGTTTCTACGGGGTAAAAGTTGCGGTCGATGACCCGATTGAGATTCTTCGT 110213 || || || || || || ||| | |||| |||||||| | || || || || Sbjct 724738 TCGGCGTGCCTCCTCGACTGGATAATGGCTGCGTTCGATGACTCTGTTCAGGTTGCGTGT 724679 Query 110214 CACAGTCTTCGTGATTTCATGGAGTTTGTCGTAATCGAACGTTTTCGTCT----CCTTAT 110269 ||| || | ||| ||||| | | | ||| || ||| || | || Sbjct 724678 CACGACCTGGACCACTTCGTGGAGGCGGCCAAAGTCGTAC----TCGCCTCGACCAGAAT 724623 Query 110270 TGACATATTTGGGGAGAGCAATAGACGCAAGATTGCACACAGAAGTCTCGTCTTTGTCGG 110329 ||||| |||| ||||| | || || |||||||| || | ||| ||| || Sbjct 724622 CAACATAAGTGGGAAGAGCCAACGATGCCAGATTGCAAACTGCGACCTCATCTGGTGCGC 724563 Query 110330 TGTATTCCAAAATTTCCGTACACAAGTTGGAACTCTTAATGACACCCAA-GTTCTTCTGA 110388 ||||||| | ||| || || || | ||||| || || | ||||| ||||||||| Sbjct 724562 TGTATTCAACAATCTCAGTGCAGAGATTGGAGCTTCGGAT-AGTCCCAAGGTTCTTCTGG 724504 Query 110389 TTCGATTTGGAGTTGCATGCATCCTTATAGAGCATGTATGGGGTACCAGTTTCCGTCTGT 110448 || || ||| || ||||||||||| |||||||| || || ||||| || ||||| Sbjct 724503 TTGCTCTTTTTGTTACACGCATCCTTATAAAGCATGTACGGCGTCCCAGTCTCTGTCTGA 724444 Query 110449 GACTTGAGAATGGCCTTCCATACATCGGCGGCGGGGACAG--TTGCGTTAGCGAGACCTT 110506 |||| ||||| || | ||| | | ||| |||| || || | | | |||| Sbjct 724443 GACTCAAGAATTGCATACCAGAGTTTCTGGGCCTTCACAGCTTTCCG--ACCACGGCCTT 724386 Query 110507 CCTCCTCGTACTTGGTGTACAAGT-CCTCAAATTCCTGTCCGTACACATCAGAAAGACCC 110565 ||| |||||| | ||| |||| |||| || || | || |||||||| | || || Sbjct 724385 CCTTCTCGTATCTCTCGTA-AAGTGCCTCGAACTCGTCACCATACACATCTGCCAGGCCT 724327 Query 110566 TTCGCCTTGTCGGGACAGAAGAGGGACCAATTTCCACCCTCCTCAACCCTCTTCATGAAC 110625 |||| || || |||||||| | ||| | | || ||| || | |||||||| Sbjct 724326 GGAGCCTCGTGAGGGCAGAAGAGAGTCCAGTCAAGATTCTTCTCGACACGTTTCATGAAT 724267 Query 110626 AGGTCAGGAATCCACATCGCCGAGAAAAGGTCACGGCAACGAGCCTCTTCATCACCTTGG 110685 ||||| || |||| | || |||| || || ||| || || || | || || Sbjct 724266 AGGTCTGGGGTCCAGAGAGCATAGAAGAGATCTCGGGCCCGGCTTTCCTCCTTGCCGTGA 724207 Query 110686 TTGAGGCGTAGCTCCAAAAAGTCCATGATATCCGAGTGCCATGGTTCGAGATAGACAGCG 110745 || ||| || ||||||||||| | || || | |||||||| || ||||| | |||| Sbjct 724206 TTCTTGCGAAGGTCCAAAAAGTCAAAGACGTCGGCATGCCATGGCTCAAGATATATAGCG 724147 Query 110746 ATGGATCCCTTACG--ACGACCCGCC-TGGTTAACATAGCGTGCTGTGGCATTGAAGACC 110802 | || ||| ||| ||||| || | ||||| || || ||| |||||||| Sbjct 724146 AAGGCACCCGGACGCTTGTTGCCGCCTTGATCGACATAACGAGCGGTGTTGTTGAAGACG 724087 Query 110803 CTGAGCATAGGAATAATTCCATCGGATTGACCATTTGTACCCCTAATTCTGGACTTATTG 110862 | | ||||||| | | ||| | |||| |||||||| || | ||| ||| | | Sbjct 724086 CGTAACATAGGAGTCAATCCGTTGGATGACCCATTTGTGCCACCAATGTAGGAACCAGTA 724027 Query 110863 GCACGAATGTCGTGGATATGCATACCAATACCACCCGCCCACTTACTAATTTGTGCACAC 110922 || |||||| ||| | | | |||||||| || || ||| || ||||| Sbjct 724026 GCGCGAATGCAGTGAACGTTGAGCCCAATACCTCCAGCGTTCTTGGAGATCATGGCACAG 723967 Query 110923 TCTGTGAGTGTACCATAAATACCATCAATCGAATCTGCCTTGTTGGCAATTAGAAAGCAA 110982 | |||| || | || || || ||||| || | || | | || || ||||| Sbjct 723966 ATTTTGAGAGTGTCGTAGATGCCTTCAATACTGTCCTCTTTCATATCGATGAGGAAGCAG 723907 Query 110983 GAAGACATCTGAGGACGAGGCGTTCCCGCATTGAAGAGTGTAGGTGTCGCATGAATGAAC 111042 || | || ||| | || || || || ||||| || ||||| | ||||| |||| Sbjct 723906 GACGCCAACTGTCCTTGCGGTGTACCAGCGTTGAACAGCGTAGGAGAAGCATGTGTGAAG 723847 Query 111043 AGACCTTGGGACATCTTGTTGTATGTGTC 111071 | ||||||||| |||||| || || Sbjct 723846 AACTTTTGGGACATGAGGTTGTAAGTTTC 723818 >seq9 Length=1292822 Score = 129 bits (142), Expect = 7e-25 Identities = 533/818 (65%), Gaps = 26/818 (3%) Strand=Plus/Minus Query 119207 ATAGTCACCCACCCTCTTTTCGAAGAAATTCGTCTTACCATCGAGTGAGATGTTTTCCAT 119266 |||||||||||| | ||| |||||||| || || || ||| | || ||||| || ||||| Sbjct 487329 ATAGTCACCCACGCGCTTCTCGAAGAAGTTGGTTTTGCCAGCAAGAGAGATATTGTCCAT 487270 Query 119267 AAAGTCAAAAGGATTTTTGGAGTTCCAGAT-TGGTGGTTGACCAACTTGTTTCAGAAGAC 119325 ||||| || ||||| | || | | | || |||| |||| || |||| Sbjct 487269 GAAGTCGAAGGGATTCGTAACATTGTAAAACTTGTTGTTG-CCAAGAGCAACAAGTAGAC 487211 Query 119326 GATCGGAGACATACTCGATATATTCGGACATCTTTTCCGAATTCATACCTATGAGATTAC 119385 |||| | ||| | || || |||| |||| ||| ||||| || | | | Sbjct 487210 GATCAGCAACAAATTCAATGTATTGCTTCATCAAGGTCGAGTTCATGCCGAGCAATGCGC 487151 Query 119386 ACGGGAGAGCATCGAGGATGAAGTTCTT-CTCGATCTCCACAGCTTCTTTCACGATGGAG 119444 |||| |||||||| || ||| |||| ||||||| | || || || | | |||| Sbjct 487150 ACGGCAGAGCATCAGTGA-GAAACTCTTGCTCGATCACGACTGCCTCGGTTATGATGTCT 487092 Query 119445 TGAATAGTTTCTGTCGATGGTTTGTTTCTCAAGAGTTTAAACAACTCTACGGCAAATTCT 119504 | | | | | |||||| ||| | | | | ||||| |||||| ||| Sbjct 487091 TCTACCGCCTGCTTTGATGGTCTGTGGTTTAGGTGGGAGAACAAGAGGCAGGCAAAATCT 487032 Query 119505 TGATGAAGCCCTTCATCCCGAGAGATGAGCTCATTACTGAAGCAAAGTCCAGGCATGAGT 119564 ||| || || || || |||||||| |||||||| |||| || || ||||| || Sbjct 487031 GTATGCAGACCCTCGTCACGAGAGATCAGCTCATTCGAGAAGGTGAGACCTGGCATCAGG 486972 Query 119565 CCTCTTTTCTTTAGCCAAAAGATGGCACAAAAACTTCCAGAAAAGAAGATGCCCTCCACA 119624 || | ||||| |||||||||| | || |||||||||||||| ||||| || Sbjct 486971 CCACGCTTCTTGAGCCAAAAGACAGATGCGAAGGAGCCAGAAAAGAAGATTCCCTCGACG 486912 Query 119625 CAGGCGAAAGCGAATAGACGCTCAGCAAAAGGTCGA-GACTTGT-CGAA--CCACTTGAG 119680 ||||| || | || || | ||||||| ||||| ||||| |||| ||| || Sbjct 486911 GCTGCGAAGGCAACAAGGCGTTGAGCAAAA-GTCGACTCCTTGTCCGAAATCCATCGAAG 486853 Query 119681 AGCCCAGTTGGCCTTACGCTCTATGCAGGGGACAGTTTGGATGGCTTCGAAAAG---TTG 119737 |||||||||||| || ||||| || | || | ||||| ||||| || ||| Sbjct 486852 AGCCCAGTTGGCTTTTTTTCGGATGCAAGGAATGGTGTCAATGGCGTCGAACAGGTATTG 486793 Query 119738 -CTTCTTTTCAGCACCATCCTTAATATATTTATCAATGAGTTTAGAGTAGGTCTCACCAT 119796 ||| ||| || ||||| || || | ||||| | | ||| |||| | Sbjct 486792 TCTTTGTTTTGGC----TCCTTGATGTACGTGTCAATCAACAAACTGTACATCTCCGAGT 486737 Query 119797 GAACCAT-TTCATTGTGTGACTGATAGGCATAAAATGAGCGAGCTTCGGAAATTTGCACT 119855 ||| | | ||| || ||| || |||| || | ||||| |||| ||||| ||| Sbjct 486736 GAATGTTCTCCATCATG-ATTTGAAAGCCATAGAAGCACCGAGCCTCGGGTATTTGGACT 486678 Query 119856 TCGTCAGCAAAATTGTT-GTTGATATTTTCAAAAACAATTCCATCGGATCCAGCGAAGAA 119914 ||| | | ||||| ||| | || ||||||| ||||| ||||| |||| ||||| Sbjct 486677 TCGCCTG-AAAATCGTTCGACGAGATTTTCATTGACAATGCCATCACTGGCAGCAAAGAA 486619 Query 119915 TGCTAAGATGTACTTTATGAA-TTTCTGTTCATTATCGTTGAG-TGTT--TTCCAGTCGT 119970 || | || || | ||| | ||| ||| | |||||| || ||| ||||||| | Sbjct 486618 GGCAAGGACGTGGGAGACGAAGTATCT-TTCGTCATCGTTTAGACGTTCACTCCAGTCAT 486560 Query 119971 CCATATCTTTAGACAAGTCCACCTCTTCAGCTGTCCAG 120008 |||||| |||| ||| || ||||| ||||||||| Sbjct 486559 GTTGATCTTTTGACAGGTCGACTTCTTCTGCTGTCCAG 486522 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 588975705512000