Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Endocarpon_20pusillum_20[genbank_20GCA_5F000611755.1_202014-04-02] 40 sequences; 37,173,200 total letters Query= NC_014789.1 Length=184409 Score E Sequences producing significant alignments: (Bits) Value seq18 237 2e-57 >seq18 Length=894979 Score = 237 bits (262), Expect = 2e-57 Identities = 902/1401 (64%), Gaps = 45/1401 (3%) Strand=Plus/Minus Query 105935 TAGATGTTCGTCGTGTAGGGTTCAAAGCATTCATTATTACCCAAGATTTGTGCGGTGGAG 105994 ||||| |||| || || || || || || || || || |||||||| || | |||||| Sbjct 725133 TAGATATTCGAGGTATATGGCTCGAAACACTCGTTGTTTCCCAAGATCTGGGAGGTGGAT 725074 Query 105995 GCTGTTGGCATTGGTGCCATCAAAAGACTGTTACGAAGACCCTTTTCCTTGATGCGTTCC 106054 ||||| ||||| || |||| | ||| ||| |||| ||| | | |||| || Sbjct 725073 GCTGTCGGCATAGGCGCCACAAGGAGAGAGTTGCGAACACCATGCTTGGCGATGTCAGCC 725014 Query 106055 TTGAGAACATCCCAGTCGTAGTTGAGCTT-GGTTTCACCTTCCCACATATCAAATTGAAG 106113 || | |||| || | | ||| | || ||||||| || | ||||| Sbjct 725013 TTCAAGCTGGCCCAATCCCACAAATCCGACGGTGTGACGC-CCCACATGTCGTACTGAAG 724955 Query 106114 CACCCCTTGGGACGTGGGAGAACCCTCAAATGTCTCATAGGAACCTTGGGCTTCAGCCAA 106173 | | |||| || ||||||||||| | |||||||| | || | ||| || | Sbjct 724954 CTCGCCTTTCGAGACTGGAGAACCCTCGTACGTCTCATATGTTCCGAGCTCTTTGGCAAG 724895 Query 106174 TTCACAGCTCGCCTCCAGGGA-TGCG---TGATACATGGTTTCAAAGATACGAGCATTCA 106229 |||||| || || || |||| ||||| || |||||||| || | | || | Sbjct 724894 CTCACAGGAGGC----AGTGAGTGCGCCATGATAGATCGTTTCAAATATCTGGGTGTTTA 724839 Query 106230 TCTCCTTGGCTTCATCTGAATCAAATGCGTAGCGGCACAA-AATAAATACATCCGCGAGA 106288 | |||||| ||||| |||| | || ||| || ||| |||| || ||| Sbjct 724838 GTTGACGTGCTTCAGGAGAATCGAATG-GCAGACGCAATGCAAGAAAGGCATCTGCAAGA 724780 Query 106289 CCTTGAACACCCAAACCAATAGGTCTGTGTCGCATATTAGACTTTCGCG--CAGTCTCAA 106346 || |||||||| | |||||||||||| ||||| | ||| ||| ||| | ||| | Sbjct 724779 CCCTGAACACCAAGACCAATAGGTCTATGTCGGAAATTG--CTTCGGCGTGCCTCCTCGA 724722 Query 106347 CGGGATAAAAATTTCTGTCAATGACTCGGTTTAGATTTTTGGTAACAATCTTTGTGATTT 106406 | |||||| | | || ||||||| ||| || || || || | || | || Sbjct 724721 CTGGATAATGGCTGCGTTCGATGACTCTGTTCAGGTTGCGTGTCACGACCTGGACCACTT 724662 Query 106407 CATGAAGTTTTTCATAATCAAAAGTGCGAGTCTCTTC----ATTGACATACTTTGGAAGG 106462 | || || || | || || | | ||| | || ||||| | ||||| Sbjct 724661 CGTGGAGGCGGCCAAAGTC----GTACTCGCCTCGACCAGAATCAACATAAGTGGGAAGA 724606 Query 106463 GCGATTGATGCCAAATTGCAAACAGCCGTCTCATCCTTATCTGTGTACTCTAAAATTTCT 106522 || | ||||||| ||||||||| || |||||| | |||| || | ||| || Sbjct 724605 GCCAACGATGCCAGATTGCAAACTGCGACCTCATCTGGTGCGCTGTATTCAACAATCTCA 724546 Query 106523 GTACACAAGTTGGAACTCTTAATCGTCCCCAAATTCTTTTGGTTACTCTTTTTGTTGCAC 106582 || || | ||||| || || ||||| | ||||| ||||| ||||||||||| ||| Sbjct 724545 GTGCAGAGATTGGAGCTTCGGATAGTCCCAAGGTTCTTCTGGTTGCTCTTTTTGTTACAC 724486 Query 106583 GCATCCTTGTAGAGCATGTAGGGCGTCCCCGTCTCCGTCTGTGACTTGAGAATTGCCTTC 106642 |||||||| || |||||||| |||||||| ||||| ||||| |||| |||||||| | | Sbjct 724485 GCATCCTTATAAAGCATGTACGGCGTCCCAGTCTCTGTCTGAGACTCAAGAATTGCATAC 724426 Query 106643 CACACATCGGCGGCTGGTACAATGGCGTT--GGCC-CGTCCCTCCGCCTCGTACTTTGTG 106699 || | | ||| ||| || || | || || || ||| |||||| | | Sbjct 724425 CAGAGTTTCTGGGCCTTCACA---GCTTTCCGACCACGGCCTTCCTTCTCGTATCTCTCG 724369 Query 106700 TAGAGGGCTTCAAACTCCTCACCCACCGCGTCGGAGAGACCTGGTGCCTTGTCTGGACAG 106759 || || || || ||||| ||||| | | || | || ||||| |||| || || ||| Sbjct 724368 TAAAGTGCCTCGAACTCGTCACCATACACATCTGCCAGGCCTGGAGCCTCGTGAGGGCAG 724309 Query 106760 AAAAGAGACCATTGACCACCCTCCTCAACCCGCTTCATGAAAAGGTCTGGAATCCACAGG 106819 || |||| ||| | | | || ||| || || |||||||| |||||||| |||| || Sbjct 724308 AAGAGAGTCCAGTCAAGATTCTTCTCGACACGTTTCATGAATAGGTCTGGGGTCCAGAGA 724249 Query 106820 GATGAAAAGAGATCTCTACACCGAGCCTCTTCGTCACCTTGGTTGAGTCGTAACTCAAGG 106879 | | |||||||||| ||| || || | || || || || | || | Sbjct 724248 GCATAGAAGAGATCTCGGGCCCGGCTTTCCTCCTTGCCGTGATTCTTGCGAAGGTCCAAA 724189 Query 106880 AACTCCATGATATCCGCGTGCCATGGCTCAAGATAGACTGCGATAGATCCCTTTCGACGC 106939 || || | || || || ||||||||||||||||| | |||| | ||| ||||| Sbjct 724188 AAGTCAAAGACGTCGGCATGCCATGGCTCAAGATATATAGCGAAGGCACCC---GGACGC 724132 Query 106940 ------CCAGCTTGATTTACATAGCGCGCTGTGGCGTTAAATACGCGAAGCATTGGAATA 106993 || |||||| ||||| || || ||| ||| || ||||| | ||| ||| | Sbjct 724131 TTGTTGCCGCCTTGATCGACATAACGAGCGGTGTTGTTGAAGACGCGTAACATAGGAGTC 724072 Query 106994 ATACCATCTGATTGACCATTTGTCCCCCGAATACGAGATTTATTGGCTCTCACATCATGG 107053 | || | ||| |||||||| || | ||| || | | || | | || Sbjct 724071 AATCCGTTGGATGACCCATTTGTGCCACCAATGTAGGAACCAGTAGCGCGAATGCAGTGA 724012 Query 107054 ATGTGCATCCCAATACCCCCAGCCCACTTTGAGATTTGCGCACACTCCGTAAGAGTTCCA 107113 | || | ||||||||| ||||| ||| ||||| ||||| | ||||| | Sbjct 724011 ACGTTGAGCCCAATACCTCCAGCGTTCTTGGAGATCATGGCACAGATTTTGAGAGTGTCG 723952 Query 107114 TAGATACCGTTGATTGAGTCCTCCTTGTTGGCGATAAGGAAGCAACTGGACATCTGCGGT 107173 ||||| || | || |||||| || | |||| |||||||| |||| | | || Sbjct 723951 TAGATGCCTTCAATACTGTCCTCTTTCATATCGATGAGGAAGCA---GGACGCCAACTGT 723895 Query 107174 CTT---GGTGTACCAGCATTGAAGAGGGTTGGTGTTGCGTGAATGAACATACCTTGGGAC 107230 | | ||||||||||| ||||| || || || | || || |||| | ||||||| Sbjct 723894 CCTTGCGGTGTACCAGCGTTGAACAGCGTAGGAGAAGCATGTGTGAAGAACTTTTGGGAC 723835 Query 107231 ATCTTGTCGTATGTCTCCAAGACAGAATCAATGTCTTCCCCGTGGATGCCGATGGCCACA 107290 || || ||| || || | | || ||||| || || |||||||| | | ||| Sbjct 723834 ATGAGGTTGTAAGTTTCAATCGCCCTCTCGATGTCGTCGCCATGGATGCCCACAGAAACA 723775 Query 107291 CGCATAAACATGTATTGGGGT 107311 ||||||| ||||| ||||||| Sbjct 723774 CGCATAAGCATGTGTTGGGGT 723754 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 589980505009600