Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Endocarpon_20pusillum_20[genbank_20GCA_5F000611755.1_202014-04-02] 40 sequences; 37,173,200 total letters Query= NC_019495.1 Length=290304 Score E Sequences producing significant alignments: (Bits) Value seq18 152 1e-31 >seq18 Length=894979 Score = 152 bits (168), Expect = 1e-31 Identities = 353/520 (68%), Gaps = 14/520 (3%) Strand=Plus/Minus Query 221954 TCAAACTTTTCACCGTACGCCTCGTCCAGGCCTGGACACCTGGCG-GGACACATCAGACT 222012 || |||| ||||| ||| | || ||||||||||| ||| | | || || | ||| | Sbjct 724359 TCGAACTCGTCACCATACACATCTGCCAGGCCTGGAG-CCTCGTGAGGGCAGAAGAGAGT 724301 Query 222013 CCAGT---GCTTGTTGTCTTTGACCCTCTGCATGAAGAGGTCCGGGATCCACAGCGCCTG 222069 ||||| | || || || ||| | | |||||| ||||| ||| |||| || || | Sbjct 724300 CCAGTCAAGATTCTTCTC---GACACGTTTCATGAATAGGTCTGGGGTCCAGAGAGCATA 724244 Query 222070 AAAGAGATCTCTGGTCCGCTGCTCCTCCACGCCGTTGTTTTTCCTCAGATCCAAAAACTC 222129 |||||||||| || ||| |||||| ||||| || || | || |||||||| || Sbjct 724243 GAAGAGATCTCGGGCCCGGCTTTCCTCCTTGCCGTGATTCTTGCGAAGGTCCAAAAAGTC 724184 Query 222130 AAAAATGTCAGCGTGCCACGGCTCCAGATAGACGGCCAGAGCGCCGGGTCGCTTGTTGCC 222189 ||| | ||| || ||||| ||||| ||||| | || | || || || ||||||||||| Sbjct 724183 AAAGACGTCGGCATGCCATGGCTCAAGATATATAGCGAAGGCACCCGGACGCTTGTTGCC 724124 Query 222190 ACCCTGATCCACCATCCTCTCCAGAG-CGTTGAAGATGCGAAGGGTCGGTACCAGTCCGT 222248 || ||||| | ||| | | | |||||||| ||| | | || || ||||| Sbjct 724123 GCCTTGATCGA-CATAACGAGCGGTGTTGTTGAAGACGCGTAACATAGGAGTCAATCCGT 724065 Query 222249 TGGATCGACCGTTGGTGCCCTTAATGTACGCACCGCCGGCCCTCAGGTTACTG-GCAGAC 222307 ||||| || || ||||| |||||| | ||| || | | | | || | Sbjct 724064 TGGATGACCCATTTGTGCCACCAATGTAGGAACCAGTAGCGCGAATG-CAGTGAACGTTG 724006 Query 222308 ATGCCGATACCACCGGCGTGTTTCGAGATCATGGCGCAGCTCTTGAGAGTGTCCATGATG 222367 | || ||||| || |||| || ||||||||||| ||| | ||||||||||| |||| Sbjct 724005 AGCCCAATACCTCCAGCGTTCTTGGAGATCATGGCACAGATTTTGAGAGTGTCGTAGATG 723946 Query 222368 CCCTCCATAGAGTCCTCCTTGACGTTCAGCAGAAAACAAGACGACATCTGAGATT-TGGT 222426 || || ||| |||||| || | | | || || || |||| || ||| || ||| Sbjct 723945 CCTTCAATACTGTCCTCTTTCATATCGATGAGGAAGCAGGACGCCAACTGTCCTTGCGGT 723886 Query 222427 GGAACAGGCGTTAAACAGCGTGGGACTGGCGTGTGTAAAG 222466 | | || ||||| |||||||| ||| || ||||| ||| Sbjct 723885 GTACCA-GCGTTGAACAGCGTAGGAGAAGCATGTGTGAAG 723847 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 928844335577600