Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Endocarpon_20pusillum_20[genbank_20GCA_5F000611755.1_202014-04-02] 40 sequences; 37,173,200 total letters Query= NC_019945.1 Length=132978 Score E Sequences producing significant alignments: (Bits) Value seq9 95.1 1e-14 >seq9 Length=1292822 Score = 95.1 bits (104), Expect = 1e-14 Identities = 157/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 28554 ATGCAAATATTTGTAAAAACATTAACGGGTAAAACCATTACCGCCGAAACGGAACCTTCA 28613 ||||| || ||||| || || || || || |||||||| || |||| |||| || Sbjct 436671 ATGCAGATCTTTGTCAAGACCTTGACAGGGAAAACCATCACACTCGAAGTGGAAAGCTCG 436612 Query 28614 GAGACGGTGGCCGATCTCAAGCAAAAAATCGCCGACAAAGAGGGAGTGCCCGTAGATCAA 28673 || || | | || | ||| || ||| ||||||||||| | ||| ||||||| Sbjct 436611 GATACAATCGATAATGTGAAGAGCAAGATCCAAGACAAAGAGGGTATTCCCCCAGATCAA 436552 Query 28674 CAGAGACTTATCTTTGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTATAAC 28733 ||| | || |||||||| ||||| || ||||||||| | || || | ||||||||| Sbjct 436551 CAGCGCCTCATCTTTGCCGGCAAGCAGTTGGAAGATGGTCGGACATTGTCGGATTATAAC 436492 Query 28734 ATTCAAAAAGAATCTACTCTGCACATGGTATTAAGATTACGAGGAGG 28780 || || ||||| ||| |||| | || || ||| | || || || Sbjct 436491 ATCCAGAAAGAGAGCACTTTGCATCTCGTGTTGAGACTGCGTGGTGG 436445 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 425404592615160