Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Endocarpon_20pusillum_20[genbank_20GCA_5F000611755.1_202014-04-02] 40 sequences; 37,173,200 total letters Query= NC_021249.1 Length=282895 Score E Sequences producing significant alignments: (Bits) Value seq9 89.7 9e-13 >seq9 Length=1292822 Score = 89.7 bits (98), Expect = 9e-13 Identities = 158/229 (69%), Gaps = 1/229 (0%) Strand=Plus/Plus Query 171840 ATACCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATTATAATCT 171899 |||||||| | ||| || | || | || | ||||| ||||| || || || || Sbjct 436898 ATACCACCACGAAGACGGAGGACGAGGTGAAGAGTAGATTCTTTCTGGATGTTGTAGTCG 436957 Query 171900 GATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGT 171959 |||| | ||| | || || | |||||||||||| || || | || || || || || Sbjct 436958 GATAGGGTTCGGCCATCTTCGAGTTGTTTACCAGCGAAGATAAGTCGTTGCTGATCCGGG 437017 Query 171960 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGACGATTCT 172019 || || || || || || || ||||| | |||||||| ||||| || ||||| || Sbjct 437018 GGAATACCCTCCTTGTCCTGAATTTTGCTCTTTACATTGTCGATAGTGTCAGACGACTCG 437077 Query 172020 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTGCA 172068 || || ||||| ||||| || ||||| | || || | || ||| |||| Sbjct 437078 ACCTCCAGAGTGATGGTCTTCCCAGTCAGAGTCTTGACGACTAT-TGCA 437125 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 905135547432000