Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Endocarpon_20pusillum_20[genbank_20GCA_5F000611755.1_202014-04-02] 40 sequences; 37,173,200 total letters Query= NC_022098.1 Length=2473870 Score E Sequences producing significant alignments: (Bits) Value seq3 122 1e-21 seq18 96.9 5e-14 >seq3 Length=2327013 Score = 122 bits (134), Expect = 1e-21 Identities = 91/107 (85%), Gaps = 0/107 (0%) Strand=Plus/Plus Query 2035647 GCCGCCAACTACCTCGACATCAAGCCCCTCCTCGATTTGGGGTGCAAGACCGTGGCCAAC 2035706 |||||||||||||| ||||||||| | || |||||| | || |||||||| || |||||| Sbjct 2279900 GCCGCCAACTACCTTGACATCAAGGCTCTTCTCGATGTCGGCTGCAAGACTGTCGCCAAC 2279959 Query 2035707 CTTATCAAGGGCAAGTCGCCCGAGGACATCCGCAAGACCTTTAACAT 2035753 | |||||||||||||| |||||||| || |||||||| || ||||| Sbjct 2279960 ATGATCAAGGGCAAGTCTCCCGAGGAGATTCGCAAGACATTCAACAT 2280006 >seq18 Length=894979 Score = 96.9 bits (106), Expect = 5e-14 Identities = 149/213 (70%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 2071800 CAGGCCGGGCGCCTCGGACGGGCAAAAGAGCGACCAGTCGCCGCCAGTCACCACGCGGCG 2071859 |||||| || |||||| ||||| ||||| | |||||| || | || || Sbjct 724333 CAGGCCTGGAGCCTCGTGAGGGCAGAAGAGAGTCCAGTCAAGATTCTTCTCGACACGTTT 724274 Query 2071860 CATAAACAGGTCGCACGTCCACAGGCCGTAAAAGAGATCGCGCGCCCGGTTCTCCTCCTT 2071919 ||| || ||||| ||||| || | || |||||||| || |||||| | |||||||| Sbjct 724273 CATGAATAGGTCTGGGGTCCAGAGAGCATAGAAGAGATCTCGGGCCCGGCTTTCCTCCTT 724214 Query 2071920 GCCGTGGTTCTTTTTCAGGTCGAGCCAGTCGACGAGGTCGGCGTGCCACGGCTCCAGGTA 2071979 |||||| ||||| ||||| | |||| | || |||||| ||||| ||||| || || Sbjct 724213 GCCGTGATTCTTGCGAAGGTCCAAAAAGTCAAAGACGTCGGCATGCCATGGCTCAAGATA 724154 Query 2071980 GCAGGCAAAGGCGCCCTTGCGCTTGCCGCCGCC 2072012 || ||||| ||| |||||| |||||| Sbjct 724153 TATAGCGAAGGCACCCGGACGCTTGTTGCCGCC 724121 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 7916242145017560