Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Endocarpon_20pusillum_20[genbank_20GCA_5F000611755.1_202014-04-02] 40 sequences; 37,173,200 total letters Query= NC_024697.1 Length=370920 Score E Sequences producing significant alignments: (Bits) Value seq18 143 6e-29 >seq18 Length=894979 Score = 143 bits (158), Expect = 6e-29 Identities = 361/541 (67%), Gaps = 11/541 (2%) Strand=Plus/Plus Query 110469 CATGCTACTCCTACCCTATTTAACGCAGGAACTAATGGAGGACAATTGGCTTCTTGCTTT 110528 |||||| ||||||| || || ||||| || || |||||| ||||| || ||||| Sbjct 723854 CATGCTTCTCCTACGCTGTTCAACGCTGGTACACCGCAAGGACAGTTGGCGTCCTGCTTC 723913 Query 110529 CTTCTAGGAATTAACGATGATTCTATTGAAGGTATTTATGATGCTCTTAAAGAAACTGCT 110588 || | | || || || || ||||||||| || || || |||| ||| ||| Sbjct 723914 CTCATCGATATGAAAGAGGACAGTATTGAAGGCATCTACGACACTCTCAAAATCTGTGCC 723973 Query 110589 CTTATTTCTAAAAACTCTGGAGGAATTGGTATTCACGTTCATGATATTCGCTCAAAAGGA 110648 | || || || ||| ||||||| ||||| | ||||||| |||||| | | || Sbjct 723974 ATGATCTCCAAGAACGCTGGAGGTATTGGGCTCAACGTTCACTGCATTCGCGCTACTGGT 724033 Query 110649 GCAAATATCGCAACAGCGAA-GGGTGCTTCAACTGGACTTGTTCCAATGTTAAGAGTCTT 110707 | | || | | || |||| | |||| ||| | ||| |||||| | ||||| Sbjct 724034 TCCTACATTGGTGGCACAAATGGGTCATCCAAC-GGATTGACTCCTATGTTACGCGTCTT 724092 Query 110708 CAACGACACTGCAAAATATGTGAATCAAGGTGGTAAGAGAAAT---GGCTCATTTGCTAT 110764 |||| |||| || ||||| ||||||| || || | | || | || ||||| Sbjct 724093 CAACAACACCGCTCGTTATGTCGATCAAGGCGGCAACAAGCGTCCGGGTGCCTTCGCTAT 724152 Query 110765 CTATCTCGAACCTTGGCATTCAGATATATTTGAATTCTTAGAACTTCGTAAAAATCAAGG 110824 ||||| || || |||||| | || | ||||| || || || ||||| || ||||| || Sbjct 724153 ATATCTTGAGCCATGGCATGCCGACGTCTTTGACTTTTTGGACCTTCGCAAGAATCACGG 724212 Query 110825 ATTTGAAGAACAAAGAGCACGTGATTTATTTTATGCAATGTGGATTTCAGATTTATTCAT 110884 || ||| | || || ||| | || ||||| | |||| |||| ||||||| Sbjct 724213 CAAGGAGGAAAGCCGGGCCCGAGATCTCTTCTATGCTCTCTGGACCCCAGACCTATTCAT 724272 Query 110885 GAAACGTGTTCAAGAA-AATGGCATG--TGGTCTCTTATGTGTCCTCATCGTTCTCCTGG 110941 |||||||| || |||| ||| | || ||| |||| | || ||||| |||| || Sbjct 724273 GAAACGTG-TCGAGAAGAAT--CTTGACTGGACTCTCTTCTGCCCTCACGAGGCTCCAGG 724329 Query 110942 TCTATCTGATGTATATGGAAAAGAGTTTGAAGACCTTTACGAAAAATATGAAAAAGAAGG 111001 || | ||||| ||||| | ||||| || | |||||||| | ||| || || ||||| Sbjct 724330 CCTGGCAGATGTGTATGGTGACGAGTTCGAGGCACTTTACGAGAGATACGAGAAGGAAGG 724389 Query 111002 C 111002 | Sbjct 724390 C 724390 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1186812191758440