Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Endocarpon_20pusillum_20[genbank_20GCA_5F000611755.1_202014-04-02] 40 sequences; 37,173,200 total letters Query= NC_025257.1 Length=102759 Score E Sequences producing significant alignments: (Bits) Value seq9 109 4e-19 >seq9 Length=1292822 Score = 109 bits (120), Expect = 4e-19 Identities = 156/216 (72%), Gaps = 8/216 (4%) Strand=Plus/Plus Query 33538 AACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAGAGTGTGCGTTCGTCG 33597 ||||| | ||| | |||||||||||| || ||||| ||||| || | ||| || | || Sbjct 436460 AACACGAGATGCAAAGTGCTCTCTTTCTGGATGTTATAATCCGACAATGTCCGACCATCT 436519 Query 33598 TCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGCACACCTTCTTTGTCG 33657 ||||| || || |||||||| || | ||||| |||||| | || | ||| |||||||| Sbjct 436520 TCCAACTGCTTGCCGGCAAAGATGAGGCGCTGTTGATCTGGGGGAATACCCTCTTTGTCT 436579 Query 33658 GCAATTTTCTGTTTCAACATAGTC-ACGGTGTC---GCTTGATTCCACGTCAACCGTGAT 33713 || || ||| |||| || | || || ||| |||||| || | ||||| Sbjct 436580 TGGATCTTGCTCTTC-ACATTATCGATTGTATCCGAGCT---TTCCACTTCGAGTGTGAT 436635 Query 33714 CGTTTTACCTGTTAACGTTTTTACAAAGATCTGCAT 33749 ||||| ||||| || || || |||||||||||||| Sbjct 436636 GGTTTTCCCTGTCAAGGTCTTGACAAAGATCTGCAT 436671 Score = 100 bits (110), Expect = 2e-16 Identities = 161/229 (70%), Gaps = 2/229 (1%) Strand=Plus/Plus Query 33523 CCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAG 33582 ||||||| || | | || | |||||| || ||||| || |||||||| ||||| Sbjct 436673 CCACCTCGCAGTCTCAGAACAAGATGTAGTGTAGATTCTTTCTGAATGTTGTAGTCGGAC 436732 Query 33583 AGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGC 33642 |||||||| | || |||| || || ||||| || ||||| |||||||||||| | || Sbjct 436733 AGTGTGCGACCATCCTCCAGCTGCTTGCCGGCGAAGATCAAGCGCTGCTGATCTGGAGGA 436792 Query 33643 ACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCAC 33701 | ||||| || || || || ||| |||| || | ||||||| ||||| || Sbjct 436793 ATGCCTTCCTTATCCTGGATCTTGCTCTTC-ACATTATCGATGGTGTCGGACGATTCAAC 436851 Query 33702 GTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCATA 33750 || | ||||| || || || || || || || || ||||| |||||| Sbjct 436852 TTCTAAGGTGATGGTCTTGCCGGTCAATGTCTTGACGAAGATTTGCATA 436900 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 328703839756800