Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Endocarpon_20pusillum_20[genbank_20GCA_5F000611755.1_202014-04-02] 40 sequences; 37,173,200 total letters Query= NC_026268.1 Length=139132 Score E Sequences producing significant alignments: (Bits) Value seq9 82.4 7e-11 >seq9 Length=1292822 Score = 82.4 bits (90), Expect = 7e-11 Identities = 104/143 (73%), Gaps = 0/143 (0%) Strand=Plus/Minus Query 25235 GATACTATCGAGCAAGTAAAACAAAAAATTACCGATAAAGAGGGTATACCGCCCGATCAG 25294 || |||||||| | ||||| |||||| || || |||||||| || || |||||| Sbjct 437067 GACACTATCGACAATGTAAAGAGCAAAATTCAGGACAAGGAGGGTATTCCCCCGGATCAG 437008 Query 25295 CAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAATGTCAGCGATTACAAT 25354 ||| |||| || | || || |||||||||||||||| ||| | ||| ||||| Sbjct 437007 CAACGACTTATCTTCGCTGGTAAACAACTCGAAGATGGCCGAACCCTATCCGACTACAAC 436948 Query 25355 ATTCAAAAAGAATCCACCATTCA 25377 || || |||||||| || |||| Sbjct 436947 ATCCAGAAAGAATCTACTCTTCA 436925 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 445094177452800