Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Endocarpon_20pusillum_20[genbank_20GCA_5F000611755.1_202014-04-02] 40 sequences; 37,173,200 total letters Query= NC_026440.1 Length=2243109 Score E Sequences producing significant alignments: (Bits) Value seq9 113 6e-19 >seq9 Length=1292822 Score = 113 bits (124), Expect = 6e-19 Identities = 263/388 (68%), Gaps = 14/388 (4%) Strand=Plus/Plus Query 1455894 CACGTCCTCGCCTTTTTTCGCCGCCAGCGATGGCATCGTGGCCGAGAACCTGGCCGGCCG 1455953 |||||||| ||||| ||| || ||||| |||||||| || || || || | || || Sbjct 486607 CACGTCCTTGCCTTCTTT-GCTGCCAGTGATGGCATTGTCAATGAAAATCTCGTCGAACG 486665 Query 1455954 CTTTATGAAAGAGGTCCAATTGCCAGAGGCACGTTTGTTTTACGGGTTCCAGATCGCCAT 1456013 ||| || |||||| | || ||||| || | || || || || || ||| || Sbjct 486666 ATTTTCAGGCGAAGTCCAAATACCCGAGGCTCGGTGCTTCTATGGCTTTCAAATCATGAT 486725 Query 1456014 CGAAAACATCCACTCTGAAACCTACTCGCTCCTGATCGACACCTACGTCAAGGACCCGGT 1456073 || ||||| ||||| || | ||| | |||| ||||| ||| ||||||| || Sbjct 486726 GGAGAACATTCACTCGGAGATGTACAGTTTGTTGATTGACACGTACATCAAGGAGCCAAA 486785 Query 1456074 CGAGAAGGACCACCTCT-TTCG-CGCCATCGACACGGTGCCGTCGGTGAGGAAAAAGGCC 1456131 | || ||| | || |||| |||||| ||||| | || | | | ||||| ||| Sbjct 486786 --ACAAAGACAATACCTGTTCGACGCCATTGACACCATTCCTTGCATCCGAAAAAAAGCC 486843 Query 1456132 GACTGGGCGATGAAGTGGATCA---ACAAGGAGGGCCTCGACACTTTGCCGAGCGGCTCG 1456188 ||||||| | ||||| |||||||| ||||| ||||| | || || | Sbjct 486844 AACTGGGCTCTTCGATGGATTTCGGACAAGGAG----TCGACT-TTTGCTCAACGCCTTG 486898 Query 1456189 TCGGCTTTGCCGC-GTCGAGGGCATCTTTTTCTCGGGCAGTTTCTGCGCCATCTTTTGGC 1456247 | | ||| || || |||||||| ||||| || || ||| ||| | ||||||||| Sbjct 486899 TTGCCTTCGCAGCCGTCGAGGGAATCTTCTTTTCTGGCTCCTTCGCATCTGTCTTTTGGC 486958 Query 1456248 TCAAGAAGCGCGGCCTCATGCCCGGTCT 1456275 |||||||||| ||||| ||||| ||||| Sbjct 486959 TCAAGAAGCGTGGCCTGATGCCAGGTCT 486986 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 7177807341926480