Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Endocarpon_20pusillum_20[genbank_20GCA_5F000611755.1_202014-04-02] 40 sequences; 37,173,200 total letters Query= NC_027213.1 Length=214699 Score E Sequences producing significant alignments: (Bits) Value seq18 214 2e-50 seq9 210 3e-49 >seq18 Length=894979 Score = 214 bits (236), Expect = 2e-50 Identities = 1198/1894 (63%), Gaps = 39/1894 (2%) Strand=Plus/Minus Query 68362 TCCTTATCCAATGTAAACTGAATGGGTGAGGATGCGGGTTTTGTACGTAGATAGTACATA 68421 |||| |||| ||| ||||| ||||||| || |||| | ||||| || |||||||| Sbjct 725523 TCCTGGTCCACTGTGAACTGGATGGGTGCAGAGGCGGCCATGGTACGCAGGTAGTACATT 725464 Query 68422 CCGGTTTTCAGACCTAGACTCCATCCGTAGAAATGCATACTTGTTAGTTTGGAATAACTT 68481 || || |||| || || |||| || |||||||| || | ||| | Sbjct 725463 CCCGTCTTCAAGCCAAGTTTCCACCCAGCAAAATGCATGGAGGTGATCTTGCCCATGGTA 725404 Query 68482 GGATCGGCTATATGAATATTCATCGATTGACTTTGATCGATGAAAGCTCCTCTATCTGCC 68541 || || | ||||||||| | || || ||| || ||||| || || | ||| || Sbjct 725403 GGCTCCTTGAGATGAATATTTAGAGACTGGGATTGGTCAATGAATGCACCCCGATCAGCA 725344 Query 68542 GCCATTTTTATAATACTCTTTTGAGGAATTTCCCAAATAGTCTTAAAAATCTGTTTGATA 68601 ||||| | | |||| | ||| || ||||||| |||||| | | ||||||| Sbjct 725343 GCCATCTGCACAATAGTTCGTTGGCTGATCTCCCAAACAGTCTTGTACAATGCTTTGATA 725284 Query 68602 TCATCTGGAAGGCTCG---TATTTTGAATGGATCCACCATCGGATATAATTATATTCTTG 68658 ||| | |||| | | | ||||||| | || || ||||| | || ||| | ||||| Sbjct 725283 TCAGCAGGAATGTTGGGAATATTTTGGACTGAGCCGCCATCAGCAATGATTCTGTTCTTC 725224 Query 68659 ATCTCATCATTCCACAATTTTCTCTCCGTTAAAACTCTAAGGAGATGCGGATTAACTATT 68718 || | || ||| | || | | || | | || ||||| || | Sbjct 725223 ATGTTGTCGGACCAGAGACCCAGATCAACAAGATCTTTCAACAGCCATGGATTGACGACC 725164 Query 68719 TGAAATTCCCCAGATAACACTCTACGAGTGTAAATATTACTGGTATATGGTTCCACAGAT 68778 || ||||| |||| | || | ||||| ||| ||||| ||||||||| || | | | Sbjct 725163 TGGAATTCTCCAGCCAGGACGCGACGAGAGTAGATATTCGAGGTATATGGCTCGAAACAC 725104 Query 68779 TCATTATTTCCCAGAATTTGAGCAGTTGATGCAGTTGGCATAGGTGCCACCAATAAACTA 68838 || || ||||||| || || | || ||||| || |||||||| ||||| | | | Sbjct 725103 TCGTTGTTTCCCAAGATCTGGGAGGTGGATGCTGTCGGCATAGGCGCCACAAGGAGAGAG 725044 Query 68839 TTTCTAAGACCATGTGTTATGATTTTATCTTTTA-GATGTTTCCAATCCCAAAGATCAGA 68897 || | || |||||| | ||| | | | || | | || ||||||||| | ||| || Sbjct 725043 TTGCGAACACCATGCTTGGCGATGTCAGCCTTCAAGCTGGC-CCAATCCCACAAATCCGA 724985 Query 68898 TGGTACAACATTCCAAAGATCGTATTGTAGAATTCCGTT----ACTTGCATATGATCCAT 68953 ||| || ||| | ||||| || || || || ||| | || || | Sbjct 724984 CGGTGTGACGCCCCACATGTCGTACTGAAGCTCGCCTTTCGAGACTGGA----GAACCCT 724929 Query 68954 TATATGTTTCATAAGGTCCTTCCTGTTCAGCTAGTTCACAACTTGCCTCTAATGCACCGT 69013 || || ||||| | ||| || || || || ||||| || | ||| || | Sbjct 724928 CGTACGTCTCATATGTTCCGAGCTCTTTGGCAAGCTCACAGGAGGCAGTGAGTGCGCCAT 724869 Query 69014 AATAAATTGTTTCGAAAATCTTCTTATTGAGATCTTGTGCTTCTAGACTATCGAATGGAT 69073 ||| || ||||| || |||| | || || | ||||||| || ||||||||| Sbjct 724868 GATAGATCGTTTCAAATATCTGGGTGTTTAGTTGACGTGCTTCAGGAGAATCGAATGGCA 724809 Query 69074 AATGTAAAAGAATAAATGCATCTGCCAATCCCTGAACCCCAATACCGATAGGTCTATGTC 69133 | | || || ||| |||||||| | |||||||| |||| ||| ||||||||||||| Sbjct 724808 GACGCAATGCAAGAAAGGCATCTGCAAGACCCTGAACACCAAGACCAATAGGTCTATGTC 724749 Query 69134 TCTTATT---TGAACTTTCAGCTTCTGGAATAGGATAATAATTAATATCTATAATTTTAT 69190 ||| | | | | || || || | ||||||| | || || | | | | Sbjct 724748 GGAAATTGCTTCGGCGTGC--CTCCTCGACT-GGATAATGGCTGCGTTCGATGACTCTGT 724692 Query 69191 TAAGATTTCGGACTACTACTTTAACCACGTCCTTTAGTTTGAGAAAATCAAA-TCGTC-C 69248 | || || || || || | ||||| || | || | ||| || | ||| | | Sbjct 724691 TCAGGTTGCGTGTCACGACCTGGACCACTTCGTGGAGGCGGCCAAAGTCGTACTCGCCTC 724632 Query 69249 ATCTATAACAAACATATTC----AGTGCTACAGATGCTAGATTACAAACTGCTACCTCAT 69304 | | || |||||| || || | ||||| ||||| |||||||| ||||||| Sbjct 724631 GACCAGAATCAACATAAGTGGGAAGAGCCAACGATGCCAGATTGCAAACTGCGACCTCAT 724572 Query 69305 TAGAATTTGCA-TATTGTATTATCTCTGTACATAGATTACTACATTTGATAGTCCCCAGA 69363 | | || |||| | ||||| || || ||||| | | ||||||||| || Sbjct 724571 CTGG-TGCGCTGTATTCAACAATCTCAGTGCAGAGATTGGAGCTTCGGATAGTCCCAAGG 724513 Query 69364 TTTTGCTGATTACTCTTTTTGTTACAGGCGTCCTTGTAAAGAATAAACGGAGTACCAGTT 69423 || | ||| || |||||||||||||| || ||||| ||||| || |||| || ||||| Sbjct 724512 TTCTTCTGGTTGCTCTTTTTGTTACACGCATCCTTATAAAGCATGTACGGCGTCCCAGTC 724453 Query 69424 TCAATCTGAGATTCGATAATAGATTTCCAAACGACCCTAGCATTTATTACGGTCTTGTAA 69483 || ||||||| || | ||| | | ||| | | || || | | || | Sbjct 724452 TCTGTCTGAGACTCAAGAATTGCATACCAGAGTTTCTGGGCCTTCACAGCTTTCCGACCA 724393 Query 69484 CGCTTCTCTTTTTCATAT-TGT-GTATATAGCCGTTCGAATTCATCTCCCCAAACATCAT 69541 || || || || ||| | | ||| | ||| ||||| || || || | ||||| Sbjct 724392 CGGCCTTCCTTCTCGTATCTCTCGTAAAGTGCC--TCGAACTCGTCACCATACACATCTG 724335 Query 69542 CCAATCCAGGACATTCATTTGGACACATCAATGACCACACATCATCATCCTTAACTCGTT 69601 ||| || ||| || | || || | | | ||| || || | || || |||| Sbjct 724334 CCAGGCCTGGAGCCTCGTGAGGGCAGAAGAGAGTCCAGTCAAGATTCTTCTCGACACGTT 724275 Query 69602 TCATAAATAGATCGGGAATCCAAAGAGCTATA-AAGAGATCTCTGGTTCTATTTTCTTCA 69660 |||| ||||| || || |||| ||||| ||| |||||||||| || | |||| || Sbjct 724274 TCATGAATAGGTCTGGGGTCCAGAGAGC-ATAGAAGAGATCTCGGGCCCGGCTTTCCTCC 724216 Query 69661 TTTCCTGTAttttttttAAGATCGAGAAACTCCATAATATCAGAATGCCATGGTTCTAGA 69720 || || ||| || ||| || | ||| || | | || | ||||||||| || ||| Sbjct 724215 TTGCCGTGATTCTTGCGAAGGTCCAAAAAGTCAAAGACGTCGGCATGCCATGGCTCAAGA 724156 Query 69721 TATATCGCCATGACTCCCGGTCGTTTATTTCCTCCCTGATCTATGTATCTGGCAGTGTTA 69780 ||||| || | | | ||||| || || || || || ||||| | || | || ||||| Sbjct 724155 TATATAGCGAAGGCACCCGGACGCTTGTTGCCGCCTTGATCGACATAACGAGCGGTGTTG 724096 Query 69781 TTATAGACTCTCAGCATCGGAATAATACCATTAGATTTACCATTTGTTCCAGAAATATAA 69840 || |||| | | ||| ||| | | || || ||| |||||||| ||| ||| || Sbjct 724095 TTGAAGACGCGTAACATAGGAGTCAATCCGTTGGATGACCCATTTGTGCCACCAATGTAG 724036 Query 69841 CTTCCTCTTGCGCGAATATTACTAATAGAT-AGACCTATTCCTCCTGCCATTTTAGAGAT 69899 || | |||||||| | | | | | || || || ||||| || | || ||||| Sbjct 724035 GAACCAGTAGCGCGAAT-GCAGTGAACGTTGAGCCCAATACCTCCAGCGTTCTTGGAGAT 723977 Query 69900 TAGAGCACAACGTTTCAATGTGTCATATATACCCTCTATGCTATCATCTATCATGTTAAG 69959 | ||||| ||| | ||||| || || || || || || || ||| |||| | | Sbjct 723976 CATGGCACAGATTTTGAGAGTGTCGTAGATGCCTTCAATACTGTCCTCTTTCATATCGAT 723917 Query 69960 AAGAAAACAGCTAGACATTTGATGATGTATAGTTCCCGCATTAAATAATGTAGGAGATGC 70019 || || ||| | || || || || || || || || | |||||||| || Sbjct 723916 GAGGAAGCAGGACGCCAACTGTCCTTGCGGTGTACCAGCGTTGAACAGCGTAGGAGAAGC 723857 Query 70020 GTGAGTGAACCATTTTTCAGAAAGCAGATTGTATGTTTCAATAGCTGATTCTATATCCCA 70079 || ||||| | |||| || | || ||||| |||||||| || || || || Sbjct 723856 ATGTGTGAAGAACTTTTGGGACATGAGGTTGTAAGTTTCAATCGCCCTCTCGATGTCGTC 723797 Query 70080 CTGATGAATTCCTATCGCGACACGCATCAACATATGCTGAGGTCGTTCTACCGTTTTATT 70139 ||| || || | | |||||||| | ||| || || |||| || | || || Sbjct 723796 GCCATGGATGCCCACAGAAACACGCATAAGCATGTGTTGGGGTCTCTCAGCTACTTGTTT 723737 Query 70140 ATTTATTTTCAACAGGTATGATTTTTCCAGAGTTTTAAACCCAAAATAGTTGTA--TGAA 70197 | || || | || ||||| ||||| |||||| || || ||||| | ||| |||| Sbjct 723736 ACCAATCTTGAGGAGATATGAACGTTCCAAAGTTTTGAAGCCGAAATATTGGTAATTGAA 723677 Query 70198 AAGTCTCTTTCGTAAATAATAACAGAATTTAGTT 70231 | ||||| || || | ||| |||| || |||| Sbjct 723676 A--TCTCTGTCATAGACGATAGCAGAGTTCAGTT 723645 >seq9 Length=1292822 Score = 210 bits (232), Expect = 3e-49 Identities = 558/849 (66%), Gaps = 14/849 (2%) Strand=Plus/Minus Query 39326 TTTTGGTATTCACCAACGCGTTTCTCGAAAAAATTAGTTTTGCCTTCCAATGATATATTT 39385 ||||| || ||||| ||||| |||||||| || || |||||||| | | || ||||| Sbjct 487334 TTTTGATAGTCACCCACGCGCTTCTCGAAGAAGTTGGTTTTGCCAGCAAGAGAGATATTG 487275 Query 39386 TCCATGAAATCAAACGGATTAGTTGCATTATAtttttttttAAATCCTAATTCTGAAATC 39445 |||||||| || || ||||| || |||| || || || || | | || Sbjct 487274 TCCATGAAGTCGAAGGGATTCGTAACATTGTAAAACTTGTTGTTGCCAAGAGCAACAAGT 487215 Query 39446 AATCTATCTGCAACAAATTCTATGTATGTTTTCATCATTTCACAATTCATTCCTATGAGT 39505 | | ||| ||||||||||| |||||| ||||||| | ||||| || | | | Sbjct 487214 AGACGATCAGCAACAAATTCAATGTATTGCTTCATCAAGGTCGAGTTCATGCCGAGCAAT 487155 Query 39506 TTAACTGGTAGAGCCTCCGTTAGAAACTCTTTTTCGATGTCTACGGCCTCTGTTATTATC 39565 || ||||| || || |||||||||| ||||| | || ||||| ||||| Sbjct 487154 GCGCACGGCAGAGCATCAGTGAGAAACTCTTGCTCGATCACGACTGCCTCGGTTAT---- 487099 Query 39566 GATGT-TACTACCTCATCACTCGGTGGA---TGCAATAAATGTTTAAACATTAAGCAGGC 39621 ||||| | ||||| | | | | ||| || || || |||| | |||||| Sbjct 487098 GATGTCTTCTACCGCCTGCTTTGATGGTCTGTGGTTTAGGTGGGAGAACAAGAGGCAGGC 487039 Query 39622 GAAGTCACAATGTAGGCCCTCATCTCTACTAATTAATTCGTTAGAAAATGTGAGTCCAGG 39681 || || ||| || ||||| || | | || | || || || || ||||| || || Sbjct 487038 AAAATCTGTATGCAGACCCTCGTCACGAGAGATCAGCTCATTCGAGAAGGTGAGACCTGG 486979 Query 39682 CATTAGACCACGCTTTTTGAGCCAAAATATGGCAGCAAAAGATCCAGAAAAGAAGATGCC 39741 ||| || |||||||| ||||||||||| | | || || || |||||||||||||| || Sbjct 486978 CATCAGGCCACGCTTCTTGAGCCAAAAGACAGATGCGAAGGAGCCAGAAAAGAAGATTCC 486919 Query 39742 TTCTACTGCTGCAAATGCAACAAGTCTCTCTCCGTAACTTGTATCATTAT---GTATCCA 39798 || || ||||| || |||||||| | | | || | | || || | ||||| Sbjct 486918 CTCGACGGCTGCGAAGGCAACAAGGCGTTGAGCAAAAGTCGACTCCTTGTCCGAAATCCA 486859 Query 39799 CTTCTGTGCCCAATCAGCTTTCTTCTTTACACAAGGCATTGTTTCTATAGCATTAAAGAG 39858 | ||||| | ||||| || | ||||| || || || || || | || || Sbjct 486858 TCGAAGAGCCCAGTTGGCTTTTTTTCGGATGCAAGGAATGGTGTCAATGGCGTCGAACAG 486799 Query 39859 ATAATGTTTTTCATCACTATCTTTAACATATGTATCTATTAACAGACTATACATTTCTGA 39918 || ||| ||| | || || | || || || || |||| ||| ||||| || || Sbjct 486798 GTATTGTCTTTGTTTTGGCTCCTTGATGTACGTGTCAATCAACAAACTGTACATCTCCGA 486739 Query 39919 ATGGATGTTTTCAATCGCCATCTGAAATCCGTAAAAACATCTTGCTTCAGTAATTTGTAC 39978 || ||||| || ||| || ||||| || || || || | || || | ||||| || Sbjct 486738 GTGAATGTTCTCCATCATGATTTGAAAGCCATAGAAGCACCGAGCCTCGGGTATTTGGAC 486679 Query 39979 CTCTGAACAAAATCTTTCCGCCAAATTTTCATTCACTATTCCATCACTAGCGGCAAAAAA 40038 || |||||| ||| | | ||||||||| || || |||||||| || ||||| || Sbjct 486678 TTCGCCTGAAAATCGTTCGACGAGATTTTCATTGACAATGCCATCACTGGCAGCAAAGAA 486619 Query 40039 TGCCAATACATGTTTAATAAAATATTTT---TCATCGGGTGTCAATTTATTCCAGTCATT 40095 || | || || | || ||| || |||||| | || | ||||||||| Sbjct 486618 GGCAAGGACGTGGGAGACGAAGTATCTTTCGTCATCGTTTAGACGTTCACTCCAGTCATG 486559 Query 40096 GATATCTTTTGATATATCTACTTCTTCAGCTGTCCAAAACGACGCCTCTGCCTTTTTGTA 40155 ||||||||| | || |||||||| |||||||| || || || || || || || || Sbjct 486558 TTGATCTTTTGACAGGTCGACTTCTTCTGCTGTCCAGAAAGAAGCTTCGGCTTTCTTATA 486499 Query 40156 CATGTTCCA 40164 ||| | ||| Sbjct 486498 CATCTGCCA 486490 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 686908456545600