Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Endocarpon_20pusillum_20[genbank_20GCA_5F000611755.1_202014-04-02] 40 sequences; 37,173,200 total letters Query= NC_028091.1 Length=196300 Score E Sequences producing significant alignments: (Bits) Value seq18 215 6e-51 seq9 89.7 6e-13 >seq18 Length=894979 Score = 215 bits (238), Expect = 6e-51 Identities = 893/1394 (64%), Gaps = 45/1394 (3%) Strand=Plus/Minus Query 110707 GTAGATGTTTGTTGTGTATGGTTCAAAGCATTCATTATTACCCAAGATTTGTGCGGTGGA 110766 |||||| || | || ||||| || || || || || || |||||||| || | |||||| Sbjct 725134 GTAGATATTCGAGGTATATGGCTCGAAACACTCGTTGTTTCCCAAGATCTGGGAGGTGGA 725075 Query 110767 GGCTGTTGGCATTGGTGCCATCAAAAGACTGTTACGAAGACCCTTCTCCTTGATGCGTTC 110826 ||||| ||||| || |||| | ||| ||| |||| ||| | || |||| | Sbjct 725074 TGCTGTCGGCATAGGCGCCACAAGGAGAGAGTTGCGAACACCATGCTTGGCGATGTCAGC 725015 Query 110827 CTTGAGAACATCCCAGTCGTAGTTGAGCTT-GGTTTCACCTTCCCACATGTCAAACTGAA 110885 ||| | |||| || | | ||| | || |||||||||| |||||| Sbjct 725014 CTTCAAGCTGGCCCAATCCCACAAATCCGACGGTGTGACGC-CCCACATGTCGTACTGAA 724956 Query 110886 GCACCCCTTGGGACGCGGGAGAACCCTCAAAGGTTTCATAGGAACCTTGGGCTTCAGCCA 110945 || | |||| || | ||||||||||| | || ||||| | || | ||| || | Sbjct 724955 GCTCGCCTTTCGAGACTGGAGAACCCTCGTACGTCTCATATGTTCCGAGCTCTTTGGCAA 724896 Query 110946 ATTCACAGCTCGCCTCCAGGGA-TGCG---TGATACATGGTTTCAAAGATACGAGCATTC 111001 |||||| || || || |||| ||||| || |||||||| || | | || Sbjct 724895 GCTCACAGGAGGC----AGTGAGTGCGCCATGATAGATCGTTTCAAATATCTGGGTGTTT 724840 Query 111002 ATCTCCTTGGCTTCATCTGAATCAAATGCGTAGCGGCACAA-AATAAATACATCCGCGAG 111060 | | |||||| ||||| |||| | || ||| || ||| |||| || || Sbjct 724839 AGTTGACGTGCTTCAGGAGAATCGAATG-GCAGACGCAATGCAAGAAAGGCATCTGCAAG 724781 Query 111061 ACCTTGAACACCCAAACCAATAGGTCTGTGTCGCATATTAGACTTTCGCG--CAGTCTCA 111118 ||| |||||||| | |||||||||||| ||||| | ||| ||| ||| | ||| Sbjct 724780 ACCCTGAACACCAAGACCAATAGGTCTATGTCGGAAATTG--CTTCGGCGTGCCTCCTCG 724723 Query 111119 ACGGGATAAAAATTTCTGTCAATGACTCGGTTTAGATTTTTGGTAACAATCTTTGTGATT 111178 || |||||| | | || ||||||| ||| || || || || | || | | Sbjct 724722 ACTGGATAATGGCTGCGTTCGATGACTCTGTTCAGGTTGCGTGTCACGACCTGGACCACT 724663 Query 111179 TCATGAAGTTTTTCATAATCAAAAGTGCGAGTCTCTTC----ATTGACATACTTTGGAAG 111234 || || || || | || || | | ||| | || ||||| | ||||| Sbjct 724662 TCGTGGAGGCGGCCAAAGTC----GTACTCGCCTCGACCAGAATCAACATAAGTGGGAAG 724607 Query 111235 GGCGATTGATGCCAAATTGCAAACAGCCGTCTCATCCTTATCTGTGTACTCTAAAATTTC 111294 || | ||||||| ||||||||| || |||||| | |||| || | ||| || Sbjct 724606 AGCCAACGATGCCAGATTGCAAACTGCGACCTCATCTGGTGCGCTGTATTCAACAATCTC 724547 Query 111295 TGTACATAAGTTGGAACTCTTAATCGTCCCCAAATTCTTTTGGTTACTCTTCTTGTTGCA 111354 || || | ||||| || || ||||| | ||||| ||||| ||||| ||||| || Sbjct 724546 AGTGCAGAGATTGGAGCTTCGGATAGTCCCAAGGTTCTTCTGGTTGCTCTTTTTGTTACA 724487 Query 111355 CGCATCCTTGTAGAGCATGTAGGGCGTCCCCGTCTCCGTCTGTGATTTGAGAATAGCCTT 111414 ||||||||| || |||||||| |||||||| ||||| ||||| || | ||||| || | Sbjct 724486 CGCATCCTTATAAAGCATGTACGGCGTCCCAGTCTCTGTCTGAGACTCAAGAATTGCATA 724427 Query 111415 CCAAACATCGGCGGCTGGTACAATGGCGTT--GGCC-CGTCCCTCCGCCTCGTACTTTGT 111471 ||| | | ||| ||| || || | || || || ||| |||||| | Sbjct 724426 CCAGAGTTTCTGGGCCTTCACA---GCTTTCCGACCACGGCCTTCCTTCTCGTATCTCTC 724370 Query 111472 GTAGAGGGCTTCAAACTCCTCACCCACCGCGTCGGAGAGACCTGGTGCCTTGTCTGGACA 111531 ||| || || || ||||| ||||| | | || | || ||||| |||| || || || Sbjct 724369 GTAAAGTGCCTCGAACTCGTCACCATACACATCTGCCAGGCCTGGAGCCTCGTGAGGGCA 724310 Query 111532 GAAAAGAGACCATTGACCACCTTCCTCAACCCGCTTCATGAAAAGGTCTGGAATCCACAG 111591 ||| |||| ||| | | | | ||| || || |||||||| |||||||| |||| || Sbjct 724309 GAAGAGAGTCCAGTCAAGATTCTTCTCGACACGTTTCATGAATAGGTCTGGGGTCCAGAG 724250 Query 111592 GGATGAAAAGAGATCTCTACACCGAGCCTCTTCGTCACCTTGGTTGAGTCGTAACTCAAG 111651 | | |||||||||| ||| || || | || || || || | || | Sbjct 724249 AGCATAGAAGAGATCTCGGGCCCGGCTTTCCTCCTTGCCGTGATTCTTGCGAAGGTCCAA 724190 Query 111652 GAACTCCATGATATCCGCGTGCCATGGCTCAAGATAGACTGCGATAGATCCCTTTCGACG 111711 || || | || || || ||||||||||||||||| | |||| | ||| |||| Sbjct 724189 AAAGTCAAAGACGTCGGCATGCCATGGCTCAAGATATATAGCGAAGGCACCC---GGACG 724133 Query 111712 C------CCAGCTTGATTTACATAGCGCGCTGTGGCGTTAAATACGCGAAGCATTGGAAT 111765 | || |||||| ||||| || || ||| ||| || ||||| | ||| ||| | Sbjct 724132 CTTGTTGCCGCCTTGATCGACATAACGAGCGGTGTTGTTGAAGACGCGTAACATAGGAGT 724073 Query 111766 AATACCATCTGATTGACCATTTGTCCCCCGAATACGAGATTTATTGGCTCTCACATCATG 111825 | || | ||| |||||||| || | ||| || | | || | | || Sbjct 724072 CAATCCGTTGGATGACCCATTTGTGCCACCAATGTAGGAACCAGTAGCGCGAATGCAGTG 724013 Query 111826 GATGTGCATCCCAATACCCCCAGCCCACTTTGAGATTTGCGCACACTCCGTAAGAGTTCC 111885 | || | ||||||||| ||||| ||| ||||| ||||| | ||||| | Sbjct 724012 AACGTTGAGCCCAATACCTCCAGCGTTCTTGGAGATCATGGCACAGATTTTGAGAGTGTC 723953 Query 111886 ATAGATACCGTTGATTGAGTCCTCCTTGTTGGCGATAAGGAAGCAACTGGACATCTGCGG 111945 ||||| || | || |||||| || | |||| |||||||| |||| | | | Sbjct 723952 GTAGATGCCTTCAATACTGTCCTCTTTCATATCGATGAGGAAGCA---GGACGCCAACTG 723896 Query 111946 TCTT---GGTGTACCAGCATTGAAGAGGGTTGGTGTTGCGTGAATGAACATACCTTGGGA 112002 || | ||||||||||| ||||| || || || | || || |||| | |||||| Sbjct 723895 TCCTTGCGGTGTACCAGCGTTGAACAGCGTAGGAGAAGCATGTGTGAAGAACTTTTGGGA 723836 Query 112003 CATCTTGTCGTATGTCTCCAAGACAGAATCAATGTCTTCCCCGTGGATGCCGATTGCGAC 112062 ||| || ||| || || | | || ||||| || || |||||||| | | || Sbjct 723835 CATGAGGTTGTAAGTTTCAATCGCCCTCTCGATGTCGTCGCCATGGATGCCCACAGAAAC 723776 Query 112063 CCGCATGAACATGT 112076 ||||| | ||||| Sbjct 723775 ACGCATAAGCATGT 723762 >seq9 Length=1292822 Score = 89.7 bits (98), Expect = 6e-13 Identities = 111/152 (73%), Gaps = 0/152 (0%) Strand=Plus/Minus Query 122658 GGCAAACTCCTGGTGGAGACCCTCATCTCGGGAAATAAGTTCATTTGAGAAGCATAGACC 122717 |||||| || || |||||||| || || || || || ||||| |||||| ||||| Sbjct 487041 GGCAAAATCTGTATGCAGACCCTCGTCACGAGAGATCAGCTCATTCGAGAAGGTGAGACC 486982 Query 122718 TGGCATGAGACCCCGCTTCTTCAACCAATAAATAGCGCAGAATGACCCGGAGAAGAAGAT 122777 |||||| || || |||||||| | |||| | | || ||| || || || |||||||| Sbjct 486981 TGGCATCAGGCCACGCTTCTTGAGCCAAAAGACAGATGCGAAGGAGCCAGAAAAGAAGAT 486922 Query 122778 ACCCTCCACACACGCAAACGCAAAAAGGCGTT 122809 ||||| || || || |||| |||||||| Sbjct 486921 TCCCTCGACGGCTGCGAAGGCAACAAGGCGTT 486890 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 628031685984000