Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Endocarpon_20pusillum_20[genbank_20GCA_5F000611755.1_202014-04-02] 40 sequences; 37,173,200 total letters Query= NC_028108.1 Length=171454 Score E Sequences producing significant alignments: (Bits) Value seq18 300 2e-76 seq9 132 5e-26 >seq18 Length=894979 Score = 300 bits (332), Expect = 2e-76 Identities = 929/1424 (65%), Gaps = 34/1424 (2%) Strand=Plus/Minus Query 78507 GAACTCGCCGGCCAGGGTCCGGCGCAGGTAGATGTTGGTCGTGTACGGCTCGAAAGCCTC 78566 ||| || || |||||| || || |||||| || | || || ||||||||| ||| Sbjct 725161 GAATTCTCCAGCCAGGACGCGACGAGAGTAGATATTCGAGGTATATGGCTCGAAACACTC 725102 Query 78567 GTTGTTCCCCATGATCTGGGCGGTCGAGGCGGTCGGCATGGGTGCGACCAGTAGAGAATT 78626 |||||| |||| |||||||| ||| || || |||||||| || || || || ||||| || Sbjct 725101 GTTGTTTCCCAAGATCTGGGAGGTGGATGCTGTCGGCATAGGCGCCACAAGGAGAGAGTT 725042 Query 78627 CCGAAGACCATGCGTCTTGATCTCGACCTTTAGGCCGTCCCAA------AATTCATTCGC 78680 |||| ||||||| | ||| || |||| | || | ||||| || || || Sbjct 725041 GCGAACACCATGCTTGGCGATGTCAGCCTTCAAGCTGGCCCAATCCCACAAATCCGACGG 724982 Query 78681 CGCGATCCCCCACATGTCCGGTTGAAGGATACCCTCGGACGCCGGCGACCCCTTGAACGT 78740 | || ||||||||||| ||||| || | || | || || |||| | |||| Sbjct 724981 TGTGACGCCCCACATGTCGTACTGAAGCTCGCCTTTCGAGACTGGAGAACCCTCGTACGT 724922 Query 78741 CTCGTAAGATCCCTCCTCCTTGGCGAGTTCGCATGACTCGAGCAGGGCCGCGTGGTACAC 78800 ||| || | ||| ||| ||||| || || || || | || || | || || | Sbjct 724921 CTCATATGTTCCGAGCTCTTTGGCAAGCTCACAGGAGGCAGTGAGTGCGCCATGATAGAT 724862 Query 78801 AGCCTCGAAGATGCCCTTGTTGAGCTCGCGCGCCTTGGTCTCGTCGAACGAAAGGCCGA- 78859 | || || || |||| || | || || | | | | |||| ||| || Sbjct 724861 CGTTTCAAATATCTGGGTGTTTAGTTGACGTGCTTCAG----GAGAATCGAATGGCAGAC 724806 Query 78860 GCAT--CATGAA-GACATCGGCCAGGCCCTGGACGCCGATAGCGATCGGTCGGTGGCGCA 78916 ||| || ||| | |||| || || ||||| || || | | | || |||| || || | Sbjct 724805 GCAATGCAAGAAAGGCATCTGCAAGACCCTGAACACCAAGACCAATAGGTCTATGTCGGA 724746 Query 78917 TGTTGCTCTTTCGGGCCGCCTCGGTCGGGTAAAAGTTCCGATCGATGACGCGGTTCAGGT 78976 ||||| || ||| ||||| || ||| | | || |||||||| | |||||||| Sbjct 724745 AATTGCTTCGGCGTGCCTCCTCGACTGGATAATGGCTGCGTTCGATGACTCTGTTCAGGT 724686 Query 78977 TACGCGTGACGACCCGAGTCACCTCGTACAATTTGGCGAAATCAAAATGATTTC--CTTT 79034 | || || |||||| | ||| |||| | | | || || | | || | Sbjct 724685 TGCGTGTCACGACCTGGACCACTTCGTGGAGGCGGCCAAAGTCGTACTCGCCTCGACCAG 724626 Query 79035 GATGAA----AGTCGGTAGGCACAGCGATGCCAGGTTGCACACGGCCGTCTCGTCCGG-- 79088 || || ||| || || || ||||||||| ||||| || || ||| || || Sbjct 724625 AATCAACATAAGTGGGAAGAGCCAACGATGCCAGATTGCAAACTGCGACCTCATCTGGTG 724566 Query 79089 -GCTAGAAACCTCGATGATTTCTGTGCACAAATTAGACGACTT--GATGGTGCCGATGTT 79145 ||| | || | || || ||||| | ||| || ||| ||| || || | ||| Sbjct 724565 CGCTGTAT---TCAACAATCTCAGTGCAGAGATTGGAG--CTTCGGATAGTCCCAAGGTT 724511 Query 79146 CTTCTGGTTGCTCTTCTCGTTACAGGCGTCCTTGTAGCACATGTACGGCGTCCCGGTCTC 79205 ||||||||||||||| | |||||| || ||||| || ||||||||||||||| ||||| Sbjct 724510 CTTCTGGTTGCTCTTTTTGTTACACGCATCCTTATAAAGCATGTACGGCGTCCCAGTCTC 724451 Query 79206 AACCTGACTCTTGAGAACGCCGTCCCAGATGTCCCGGGCCCGGACAACCTTCTTGTACCG 79265 |||| || |||| | | ||||| | | ||||| ||| | ||| || Sbjct 724450 TGTCTGAGACTCAAGAATTGCATACCAGAGTTTCTGGGCCTTCACAGCTTTCCGACCACG 724391 Query 79266 ACCCTGTGCGACGTACGTCCGGTACAACTCGTTGAAAGCCTCCCCATAGACATCGGGCAG 79325 || | |||| || ||| | | | ||| | || ||||| ||||| | ||| Sbjct 724390 GCCTTCCTTCTCGTATCTCTCGTAAAGTGCCTCGAACTCGTCACCATACACATCTGCCAG 724331 Query 79326 GCCCGGGCACTCGTGCGGGCACATCAGGTGCCAGTCCTCGTCCTTCTCAACCTTCTCCAT 79385 ||| || |||||| ||||| | || |||||| | |||||| || | ||| Sbjct 724330 GCCTGGAGCCTCGTGAGGGCAGAAGAGAGTCCAGTCAAGATTCTTCTCGACACGTTTCAT 724271 Query 79386 GAAGAGGTCCGGGATCCACAGGGCCGTGAAGAGGTCGCGGCAACGCATCTCCTCGTCGCC 79445 ||| ||||| ||| |||| || || |||||| || ||| || | ||||| | ||| Sbjct 724270 GAATAGGTCTGGGGTCCAGAGAGCATAGAAGAGATCTCGGGCCCGGCTTTCCTCCTTGCC 724211 Query 79446 CTGGTTCAGACGCAGCTCGAGAAAGTCCATGATGTCGGCGTGCCACGGCTCCAGATAGAT 79505 || ||| || || || | |||||| | || |||||| ||||| ||||| ||||| || Sbjct 724210 GTGATTCTTGCGAAGGTCCAAAAAGTCAAAGACGTCGGCATGCCATGGCTCAAGATATAT 724151 Query 79506 GGCGAACGAACCCTTGCGCTTGCCGCCGCCCTGGTTGACGTACCGGGCCGTGTTGTTGAA 79565 ||||| | |||| |||||| |||||| || | ||| || || || ||||||||||| Sbjct 724150 AGCGAAGGCACCCGGACGCTTGTTGCCGCCTTGATCGACATAACGAGCGGTGTTGTTGAA 724091 Query 79566 AACTCGGAGCATGGGCACGATGCCGTCGG-CGACGCCGTTCGTCCCGTTGATTCGTGTAC 79624 || || | ||| || | |||| || ||| || || || || || | || Sbjct 724090 GACGCGTAACATAGGAGTCAATCCGTTGGATGAC-CCATTTGTGCCACCAATGTAGGAAC 724032 Query 79625 CGCTCGCCCGAATG-TTCGAGCAGTGGATTCCGATGCCCCCGGACCACTTGGAGATGTGC 79683 | | || |||||| || | || || || || || || | ||||||||| Sbjct 724031 CAGTAGCGCGAATGCAGTGAAC-GTTGAGCCCAATACCTCCAGCGTTCTTGGAGATCATG 723973 Query 79684 GCGCACTCCTTGAGCGTCTCGTAGATGCCCTCGATCGAGTCGTCCTTCATAGCGACCAGG 79743 || || ||||| || ||||||||||| || || ||| || |||||| ||| ||| Sbjct 723972 GCACAGATTTTGAGAGTGTCGTAGATGCCTTCAATACTGTCCTCTTTCATATCGATGAGG 723913 Query 79744 AAGCAGCTCGACATCTGTGGGTTGTTCGTACCGGCGTTGAAGAGGGTCGGCGTCGCGTGC 79803 |||||| || || |||| | ||||| |||||||| || || || | || || Sbjct 723912 AAGCAGGACGCCAACTGTCCTTGCGGTGTACCAGCGTTGAACAGCGTAGGAGAAGCATGT 723853 Query 79804 GTGAAGAACTTTTGGCTCATCAGATCGTACGTCTCCTTGACGCGCGGGAGGTCGTCGCCG 79863 ||||||||||||||| ||| || | ||| || || | | | | || ||||||||| Sbjct 723852 GTGAAGAACTTTTGGGACATGAGGTTGTAAGTTTCAATCGCCCTCTCGATGTCGTCGCCA 723793 Query 79864 TGGATGCCGACCGCGACGCGCATGAAGAGGTACTGGGGCGTCTC 79907 |||||||| || | || ||||| | | || ||||| |||| Sbjct 723792 TGGATGCCCACAGAAACACGCATAAGCATGTGTTGGGGTCTCTC 723749 Score = 215 bits (238), Expect = 6e-51 Identities = 904/1410 (64%), Gaps = 48/1410 (3%) Strand=Plus/Plus Query 19118 ATGCGAGTCGCGGTCGGCATCCATGGCGACGACCTCCCGCGAGTCCGC--GAGACATACG 19175 ||||| || | || |||||||||||||||||| || | ||| || || || ||| Sbjct 723770 ATGCGTGTTTCTGTGGGCATCCATGGCGACGACATC--GAGAGGGCGATTGAAACTTACA 723827 Query 19176 ACCTGATGAGCCAGAAGTTCTTCACGCACGCGACGCCGACCCTTTTCAACGCCGGTACGA 19235 |||| ||| ||| ||||||||||| || || | || || || |||||||| ||||| Sbjct 723828 ACCTCATGTCCCAAAAGTTCTTCACACATGCTTCTCCTACGCTGTTCAACGCTGGTAC-- 723885 Query 19236 ACAACCCG--CAGATGTCGAGCTGTTTCCTAGTGGCTATGAAGGATGACAGCATTGAGGG 19293 || | | ||| || || ||| ||||| | | |||||| || ||||| ||||| || Sbjct 723886 ACCGCAAGGACAGTTGGCGTCCTGCTTCCTCATCGATATGAAAGAGGACAGTATTGAAGG 723945 Query 19294 CATCTACGAGACGCTCAAGGAGTGCGCGCACATCTCCAAGTGGTCCGGGGGTATCGGGAT 19353 ||||||||| || ||||| || || ||||||||| | || ||||| ||| | Sbjct 723946 CATCTACGACACTCTCAAAATCTGTGCCATGATCTCCAAGAACGCTGGAGGTATTGGGCT 724005 Query 19354 CCACTGCTCGAAT--ATCCGGTCGAGTGGTACACGAATCAATGGGACGAACGGAGTAGCC 19411 | || | || | | || || | | |||| | || ||| || || || | || Sbjct 724006 CAAC-GTTC-ACTGCATTCGCGCTACTGGTTCCTACATTGGTGGCACAAATGGGTCATCC 724063 Query 19412 GACGGTATCGTC-CCAATGCTCCGCGTCTTCAACAACACGGCCAGGTACGTCAACCAGGG 19470 |||| || | | || ||| | ||||||||||||||||| || | || ||| | || || Sbjct 724064 AACGG-ATTGACTCCTATGTTACGCGTCTTCAACAACACCGCTCGTTATGTCGATCAAGG 724122 Query 19471 GGGCGGCAAACGCAAGGGCTCGTTCGCCATCTACCTCGAGCCATGGCACGCGGACGTCAT 19530 ||| ||| || ||| | ||||| || || || ||||||||||| || |||||| | Sbjct 724123 CGGCAACAAGCGTCCGGGTGCCTTCGCTATATATCTTGAGCCATGGCATGCCGACGTCTT 724182 Query 19531 GGATTTCCTCGAACTGCGCCTGAACCAGGGTGACGAGGAGATGCGCTGTCGCGACCTCTT 19590 || || | || || ||| ||| || || | ||||| | || || || ||||| Sbjct 724183 TGACTTTTTGGACCTTCGCAAGAATCACGGCAAGGAGGAAAGCCGGGCCCGAGATCTCTT 724242 Query 19591 CACGGCCTTGTGGATTCCGGACCTATTCATGGAGAAGGTTGAGAAGGACGAAGAATGGCA 19650 | || | |||| || |||||||||||| | || |||||| | || ||| Sbjct 724243 CTATGCTCTCTGGACCCCAGACCTATTCATGAAACGTGTCGAGAAGAATCTTGACTGGAC 724302 Query 19651 CCTGATGTGCCCGCACGAATGCCCTGGCCTACCCGACGTCTACGGCGAGGCGTTCAATGA 19710 || | ||||| ||||| || ||||| | || || || || || | |||| | | Sbjct 724303 TCTCTTCTGCCCTCACGAGGCTCCAGGCCTGGCAGATGTGTATGGTGACGAGTTCGAGGC 724362 Query 19711 GTTGTACCGGACTTACGTAGCCCAGGGCCG-GTTCAAGAAGGTGGTCCGGGCCCGGGACG 19769 | ||| || |||| | ||||| | || ||| || | ||||| | | Sbjct 724363 ACTTTACGAGAGATACGAGAAGGAAGGCCGTGGTCGGAAAGCTG-TGAAGGCCCAGAAAC 724421 Query 19770 TCTGGGACCGCGTCCTCAAAAGCCAGGTCGAGACCGGCACACCGTACATGTGCTACAAGG 19829 ||||| | | || | ||| ||||| || || ||||||||| || |||| Sbjct 724422 TCTGGTATGCAATTCTTGAGTCTCAGACAGAGACTGGGACGCCGTACATGCTTTATAAGG 724481 Query 19830 ACGCCGCGAACGCCAAGTCAAATCAGAAGAACATCGGCGCGATC--AAGTCGTCCAACCT 19887 | || ||| ||| || ||||||||| | || | ||| ||| ||||| || Sbjct 724482 ATGCGTGTAACAAAAAGAGCAACCAGAAGAACCTTGGGACTATCCGAAGC--TCCAATCT 724539 Query 19888 GTGTACTGAAATCATGGAGGTTTCCAAGCCGGACGAGACTGCCGTGTGTAATCTGGCGTC 19947 || ||||| || | || | || || ||| || || || |||||||| || Sbjct 724540 CTGCACTGAGATTGTTGAATACAGCGCACCAGATGAGGTCGCAGTTTGCAATCTGGCATC 724599 Query 19948 CCTGTGCCTGCCGACTT----------TCGTCAAGGCCTCCTCCTTCGACTTTGCCAAAT 19997 || || || |||| | ||| |||| | |||||||| | Sbjct 724600 GTTGGCTCTTCCCACTTATGTTGATTCTGGTCGAGGCGAG----TACGACTTTGGCCGCC 724655 Query 19998 TGTACGAGGTGACCCGGGTCGTCACGCGTAATCTGAATCGCGTCATCGATCGGAACTTTT 20057 | |||| ||| || |||||| || || || ||||| | |||||||| || | | || Sbjct 724656 TCCACGAAGTGGTCCAGGTCGTGACACGCAACCTGAACAGAGTCATCGAACGCAGCCATT 724715 Query 20058 ACCCGACCGAGGCGGCGCGC--AAGTCGAATATGCGCCACCGGCCGATCGCGATCGGCGT 20115 | || ||||| ||| ||| ||| ||| | || || | || || | | || || Sbjct 724716 ATCCAGTCGAGGAGGCACGCCGAAGC--AATTTCCGACATAGACCTATTGGTCTTGGTGT 724773 Query 20116 CCAGGGCCTGGCCGACGTTTTCATGATGCTCGGCCTCT--CATTCGACGATCCCAAGGCG 20173 ||||| || || || | || | ||| || ||| ||||||| ||| | || Sbjct 724774 TCAGGGTCTTGCAGATGCCTTTCT--TGCATTGCGTCTGCCATTCGATTCTCCTGAAGCA 724831 Query 20174 CGCGAGCTCAACAAGGGCATCTTCGAGGCCGTGTACCACGCGGCCCTCCTGGAATCGTGC 20233 || | || |||| || || || | | || || | || ||| | || || Sbjct 724832 CGTCAACTAAACACCCAGATATTTGAAACGATCTATCATGGCGCACTCACTGCCTCCTGT 724891 Query 20234 GAACTCGCCAAAGAGGACGGCCCGTACGAGACGTTCAAGGGGTCGCCCGCGTCCGAGGGT 20293 || || ||||||||| ||| | || ||||||| | |||| || || | || | || Sbjct 724892 GAGCTTGCCAAAGAGCTCGGAACATATGAGACGTACGAGGGTTCTCCAGTCTCGAAAGGC 724951 Query 20294 ATCCTCCAGCCGGACATGTGGGGCGTCACTGAGAATGAGTT------TTGGAGCGCCCTC 20347 || ||| ||||||||||||||||| | || || |||| | | | Sbjct 724952 GAGCTTCAGTACGACATGTGGGGCGTCACACCGTCGGATTTGTGGGATTGGGCCAGCTTG 725011 Query 20348 AAGGTTGAGATCAAGACCCACGGGCTTCGCAACTCGTTGCTCGTCGCGCCCATGCCGACC 20407 |||| ||| ||| | || || |||||||||| | || || ||||| |||||||| Sbjct 725012 AAGGCTGACATCGCCAAGCATGGTGTTCGCAACTCTCTCCTTGTGGCGCCTATGCCGACA 725071 Query 20408 GCCTCGACCGCCCAGATCATGGGGAACAACGAGGCTTTCGAGCCGTACACGACCAACATC 20467 || || ||| |||||||| |||| ||||||||| ||||||||| || || | || ||| Sbjct 725072 GCATCCACCTCCCAGATCTTGGGAAACAACGAGTGTTTCGAGCCATATACCTCGAATATC 725131 Query 20468 TACTTGCGTCGTACACTGGCCGGTGAGTTC 20497 |||| ||||| ||||| || || ||| Sbjct 725132 TACTCTCGTCGCGTCCTGGCTGGAGAATTC 725161 >seq9 Length=1292822 Score = 132 bits (146), Expect = 5e-26 Identities = 297/435 (68%), Gaps = 11/435 (3%) Strand=Plus/Plus Query 59703 GTCCTGGCCTTCTTCGCGGCGAGTGATGGAATTGTGATGGAAAATATAGACATGAACT-T 59761 ||||| |||||||| || || |||||||| ||||| | |||||| | | | |||| | Sbjct 486610 GTCCTTGCCTTCTTTGCTGCCAGTGATGGCATTGTCAATGAAAATCTCGTC--GAACGAT 486667 Query 59762 TTCCAAG-GATGTCCAGATTGCCGAGGCCCGGTCGTTCTACGCGTATCAGTCGTTCAACG 59820 || || | || ||||| || ||||||| |||| ||||| | | ||| | | | Sbjct 486668 TTTCAGGCGAAGTCCAAATACCCGAGGCTCGGTGCTTCTATGGCTTTCAAATCATGATGG 486727 Query 59821 AGTCTATCCACTCCGAGACGTACTCGCTCATGATCGATAAGTTGGTCAAGGATCCGGAAG 59880 || || ||||| |||| |||| | |||| || | || ||||||| || || Sbjct 486728 AGAACATTCACTCGGAGATGTACAGTTTGTTGATTGACACGTACATCAAGGAGCCAAAAC 486787 Query 59881 AGAAGGCTGGTC-TGTTCCGTGCCATAGAGACG-TCCCCCGCAGTTAAACAAAAAGCAGA 59938 | ||| | | ||||| ||||| || || | || ||| || ||||||| | Sbjct 486788 A-AAGACAATACCTGTTCGACGCCATTGACACCATTCCTTGCATCCGAA-AAAAAGCCAA 486845 Query 59939 ATGGGCCATGCAGTGGATGA--GTCCTGGAG-CATCATTTGCACAACGTCTCATAGCTTT 59995 ||||| | | ||||| | | |||| | | ||||| ||||| || | || || Sbjct 486846 CTGGGCTCTTCGATGGATTTCGGACAAGGAGTCGACTTTTGCTCAACGCCTTGTTGCCTT 486905 Query 59996 TGCATGCGTGGAAGGAATCTTCTTCTCTGGCTCGTTCTGTGCTATTTTCTGGCTCAAAAA 60055 ||| ||| || ||||||||||| |||||||| ||| || | || |||||||| || Sbjct 486906 CGCAGCCGTCGAGGGAATCTTCTTTTCTGGCTCCTTCGCATCTGTCTTTTGGCTCAAGAA 486965 Query 60056 GCGTGGCCTCATGCCGGGCCTGAGTTTCTCCAACGAGCTGATTTCCCGGGACGAGGGCCT 60115 ||||||||| ||||| || || | ||||| || |||||||| || || |||||||| || Sbjct 486966 GCGTGGCCTGATGCCAGGTCTCACCTTCTCGAATGAGCTGATCTCTCGTGACGAGGGTCT 487025 Query 60116 CCATCAGGAGTTTGC 60130 ||| || ||||| Sbjct 487026 GCATACAGATTTTGC 487040 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 548524525737600